RNA–Protein interactions for RNA: ENST00000466872.2

C9orf135-202, Transcript of chromosome 9 open reading frame 135, humanhuman

TSL 1 (best)

Gene C9orf135, Length 794 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf135-202ENST00000466872 AEBP2Q6ZN18 517 aaPredicted RBP29.71■■■□□ 2.35
C9orf135-202ENST00000466872 CHIC1Q5VXU3 224 aa28.87■■■□□ 2.21
C9orf135-202ENST00000466872 PHF23Q9BUL5 403 aaPredicted RBP25.4■■□□□ 1.66
C9orf135-202ENST00000466872 SENP3Q9H4L4 574 aaPredicted RBP25.2■■□□□ 1.62
C9orf135-202ENST00000466872 NISCHQ9Y2I1 1504 aa23.86■■□□□ 1.41
C9orf135-202ENST00000466872 FOXD1Q16676 465 aa23.43■■□□□ 1.34
C9orf135-202ENST00000466872 PLPPR3Q6T4P5 718 aa23.35■■□□□ 1.33
C9orf135-202ENST00000466872 PPP6R1Q9UPN7 881 aa22.45■■□□□ 1.18
C9orf135-202ENST00000466872 ADRA2BP18089 450 aa22.39■■□□□ 1.17
C9orf135-202ENST00000466872 PIAS4Q8N2W9 510 aaPredicted RBP22.01■■□□□ 1.11
C9orf135-202ENST00000466872 MSH5O43196 834 aa21.63■■□□□ 1.05
C9orf135-202ENST00000466872 CCDC180Q9P1Z9 1646 aa21.29■■□□□ 1
C9orf135-202ENST00000466872 ABCC9O60706 1549 aa20.69■□□□□ 0.9
C9orf135-202ENST00000466872 PPP4R3CPQ6ZMV5 832 aa20.57■□□□□ 0.88
C9orf135-202ENST00000466872 SCAF1Q9H7N4 1312 aaKnown RBP20.46■□□□□ 0.87
C9orf135-202ENST00000466872 MAPK8IP2Q13387 824 aaPredicted RBP20.36■□□□□ 0.85
C9orf135-202ENST00000466872 DMRT2Q9Y5R5 561 aa20.11■□□□□ 0.81
C9orf135-202ENST00000466872 CNKSR2Q8WXI2 1034 aa20.02■□□□□ 0.8
C9orf135-202ENST00000466872 POTEDQ86YR6 584 aa19.96■□□□□ 0.79
C9orf135-202ENST00000466872 NCBP3Q53F19 620 aaKnown RBP19.95■□□□□ 0.78
C9orf135-202ENST00000466872 RB1CC1Q8TDY2 1594 aa19.94■□□□□ 0.78
C9orf135-202ENST00000466872 NACADO15069 1562 aa19.93■□□□□ 0.78
C9orf135-202ENST00000466872 KCNA4P22459 653 aa19.93■□□□□ 0.78
C9orf135-202ENST00000466872 ZCCHC6Q5VYS8 1495 aaKnown RBP19.92■□□□□ 0.78
C9orf135-202ENST00000466872 MYO15BQ96JP2 1530 aa19.88■□□□□ 0.77
C9orf135-202ENST00000466872 DCAF1Q9Y4B6 1507 aa19.79■□□□□ 0.76
C9orf135-202ENST00000466872 NPM3O75607 178 aaKnown RBP19.7■□□□□ 0.74
C9orf135-202ENST00000466872 RNF216Q9NWF9 866 aaPredicted RBP19.68■□□□□ 0.74
C9orf135-202ENST00000466872 UNC13AQ9UPW8 1703 aa19.66■□□□□ 0.74
C9orf135-202ENST00000466872 HOXD11P31277 338 aaPredicted RBP19.66■□□□□ 0.74
C9orf135-202ENST00000466872 DCAF8L2P0C7V8 631 aa19.62■□□□□ 0.73
C9orf135-202ENST00000466872 BICRAQ9NZM4 1560 aa19.48■□□□□ 0.71
C9orf135-202ENST00000466872 SCRIBQ14160 1630 aa19.33■□□□□ 0.69
C9orf135-202ENST00000466872 PABPN1Q86U42 306 aaKnown RBP eCLIP19.26■□□□□ 0.67
C9orf135-202ENST00000466872 DNAJC5BQ9UF47 199 aa19.24■□□□□ 0.67
C9orf135-202ENST00000466872 SHROOM4Q9ULL8 1493 aa19.19■□□□□ 0.66
C9orf135-202ENST00000466872 DCAF8L1A6NGE4 600 aa19.14■□□□□ 0.65
C9orf135-202ENST00000466872 SLC4A1APQ9BWU0 796 aaKnown RBP18.91■□□□□ 0.62
C9orf135-202ENST00000466872 EIF4G1Q04637 1599 aaKnown RBP18.88■□□□□ 0.61
C9orf135-202ENST00000466872 CC2D2AQ9P2K1 1620 aa18.8■□□□□ 0.6
C9orf135-202ENST00000466872 SLC4A2P04920 1241 aa18.66■□□□□ 0.58
C9orf135-202ENST00000466872 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.65■□□□□ 0.58
C9orf135-202ENST00000466872 CECR2Q9BXF3 1484 aa18.6■□□□□ 0.57
C9orf135-202ENST00000466872 RNF39Q9H2S5 420 aa18.55■□□□□ 0.56
C9orf135-202ENST00000466872 SMARCA4P51532 1647 aa18.55■□□□□ 0.56
C9orf135-202ENST00000466872 BAZ1AQ9NRL2 1556 aaPredicted RBP18.47■□□□□ 0.55
C9orf135-202ENST00000466872 PEG3Q9GZU2 1588 aa18.42■□□□□ 0.54
C9orf135-202ENST00000466872 ATAD2BQ9ULI0 1458 aa18.41■□□□□ 0.54
C9orf135-202ENST00000466872 NCAPD3P42695 1498 aa18.4■□□□□ 0.54
C9orf135-202ENST00000466872 MROH2BQ7Z745 1585 aa18.4■□□□□ 0.54
C9orf135-202ENST00000466872 U3KPZ7 1027 aaPredicted RBP18.39■□□□□ 0.53
C9orf135-202ENST00000466872 SMARCA2P51531 1590 aa18.36■□□□□ 0.53
C9orf135-202ENST00000466872 FOXD4L1Q9NU39 408 aa18.36■□□□□ 0.53
C9orf135-202ENST00000466872 HMGXB3Q12766 1538 aa18.35■□□□□ 0.53
C9orf135-202ENST00000466872 ZBTB22O15209 634 aa18.35■□□□□ 0.53
C9orf135-202ENST00000466872 C1QBPQ07021 282 aaKnown RBP18.31■□□□□ 0.52
C9orf135-202ENST00000466872 WIZO95785 1651 aa18.22■□□□□ 0.51
C9orf135-202ENST00000466872 BAZ1BQ9UIG0 1483 aaKnown RBP18.2■□□□□ 0.5
C9orf135-202ENST00000466872 MYCNP04198 464 aaPredicted RBP18.19■□□□□ 0.5
C9orf135-202ENST00000466872 EHMT2Q96KQ7 1210 aa18.17■□□□□ 0.5
C9orf135-202ENST00000466872 RSF1Q96T23 1441 aaPredicted RBP18.15■□□□□ 0.5
C9orf135-202ENST00000466872 CSRNP3Q8WYN3 585 aa18.13■□□□□ 0.49
C9orf135-202ENST00000466872 CACNB1Q02641 598 aaPredicted RBP18.11■□□□□ 0.49
C9orf135-202ENST00000466872 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.07■□□□□ 0.48
C9orf135-202ENST00000466872 HNRNPUL2Q1KMD3 747 aaKnown RBP18.07■□□□□ 0.48
C9orf135-202ENST00000466872 TOP2AP11388 1531 aaKnown RBP18■□□□□ 0.47
C9orf135-202ENST00000466872 SAMD1Q6SPF0 538 aaPredicted RBP18■□□□□ 0.47
C9orf135-202ENST00000466872 NESP48681 1621 aa17.97■□□□□ 0.47
C9orf135-202ENST00000466872 LAMC3Q9Y6N6 1575 aa17.91■□□□□ 0.46
C9orf135-202ENST00000466872 SPINK5Q9NQ38 1064 aaPredicted RBP17.91■□□□□ 0.46
C9orf135-202ENST00000466872 APLP2Q06481 763 aa17.89■□□□□ 0.45
C9orf135-202ENST00000466872 KIF21AQ7Z4S6 1674 aa17.81■□□□□ 0.44
C9orf135-202ENST00000466872 CADPSQ9ULU8 1353 aa17.8■□□□□ 0.44
C9orf135-202ENST00000466872 CAPN15O75808 1086 aa17.79■□□□□ 0.44
C9orf135-202ENST00000466872 THOC2Q8NI27 1593 aaKnown RBP17.79■□□□□ 0.44
C9orf135-202ENST00000466872 ATXN8OSP0DMR3 200 aa17.77■□□□□ 0.44
C9orf135-202ENST00000466872 CCDC88BA6NC98 1476 aa17.75■□□□□ 0.43
C9orf135-202ENST00000466872 CFTRP13569 1480 aa17.75■□□□□ 0.43
C9orf135-202ENST00000466872 ERCC6Q03468 1493 aa17.75■□□□□ 0.43
C9orf135-202ENST00000466872 ATF5Q9Y2D1 282 aaPredicted RBP17.74■□□□□ 0.43
C9orf135-202ENST00000466872 PRDM2Q13029 1718 aa17.72■□□□□ 0.43
C9orf135-202ENST00000466872 PDS5BQ9NTI5 1447 aa17.7■□□□□ 0.42
C9orf135-202ENST00000466872 ZNF219Q9P2Y4 722 aaPredicted RBP17.69■□□□□ 0.42
C9orf135-202ENST00000466872 CUX2O14529 1486 aa17.69■□□□□ 0.42
C9orf135-202ENST00000466872 TRHP20396 242 aaPredicted RBP17.68■□□□□ 0.42
C9orf135-202ENST00000466872 FANCD2Q9BXW9 1451 aa17.62■□□□□ 0.41
C9orf135-202ENST00000466872 DSG3P32926 999 aa17.6■□□□□ 0.41
C9orf135-202ENST00000466872 WDR62O43379 1518 aa17.6■□□□□ 0.41
C9orf135-202ENST00000466872 MRC2Q9UBG0 1479 aa17.58■□□□□ 0.41
C9orf135-202ENST00000466872 CEP164Q9UPV0 1460 aa17.58■□□□□ 0.41
C9orf135-202ENST00000466872 URB2Q14146 1524 aaKnown RBP17.51■□□□□ 0.39
C9orf135-202ENST00000466872 SUPT5HO00267 1087 aaKnown RBP17.47■□□□□ 0.39
C9orf135-202ENST00000466872 ABCB7O75027 752 aa17.45■□□□□ 0.38
C9orf135-202ENST00000466872 POLA2Q14181 598 aa17.4■□□□□ 0.38
C9orf135-202ENST00000466872 TOPBP1Q92547 1522 aa17.37■□□□□ 0.37
C9orf135-202ENST00000466872 DNMBPQ6XZF7 1577 aa17.36■□□□□ 0.37
C9orf135-202ENST00000466872 ABCC8Q09428 1581 aa17.29■□□□□ 0.36
C9orf135-202ENST00000466872 CUX1P39880 1505 aa17.26■□□□□ 0.35
C9orf135-202ENST00000466872 TARBP1Q13395 1621 aaKnown RBP17.25■□□□□ 0.35
C9orf135-202ENST00000466872 POLA1P09884 1462 aaPredicted RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms