RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Morc2aQ69ZX6 1030 aa19.91■□□□□ 0.78
Ctcf-201ENSMUST00000005841 Nap1l3Q794H2 544 aa19.91■□□□□ 0.78
Ctcf-201ENSMUST00000005841 XpcP51612 930 aa19.9■□□□□ 0.78
Ctcf-201ENSMUST00000005841 Mctp1E9PV86 951 aa19.9■□□□□ 0.78
Ctcf-201ENSMUST00000005841 Nkx2-3P97334 362 aa19.9■□□□□ 0.78
Ctcf-201ENSMUST00000005841 Lrriq3Q14DL3 633 aa19.9■□□□□ 0.78
Ctcf-201ENSMUST00000005841 Mkrn3Q60764 544 aa19.9■□□□□ 0.78
Ctcf-201ENSMUST00000005841 Dnaaf4Q8R368 420 aa19.9■□□□□ 0.78
Ctcf-201ENSMUST00000005841 Wdr17E9Q271 1322 aa19.9■□□□□ 0.78
Ctcf-201ENSMUST00000005841 Lama4P97927 1816 aa19.89■□□□□ 0.78
Ctcf-201ENSMUST00000005841 Ica1lQ3TY65 431 aa19.89■□□□□ 0.78
Ctcf-201ENSMUST00000005841 Dixdc1Q80Y83 711 aa19.89■□□□□ 0.78
Ctcf-201ENSMUST00000005841 Atf7Q8R0S1 413 aa19.89■□□□□ 0.78
Ctcf-201ENSMUST00000005841 StrbpQ91WM1 672 aaKnown RBP19.89■□□□□ 0.78
Ctcf-201ENSMUST00000005841 Eif4a1P60843 406 aaKnown RBP19.89■□□□□ 0.77
Ctcf-201ENSMUST00000005841 Ubr2Q6WKZ8 1755 aa19.89■□□□□ 0.77
Ctcf-201ENSMUST00000005841 Mst1rQ62190 1378 aa19.89■□□□□ 0.77
Ctcf-201ENSMUST00000005841 Lcmt1A0A0U1RNF2 332 aa19.89■□□□□ 0.77
Ctcf-201ENSMUST00000005841 Rrp1P56183 494 aaKnown RBP19.89■□□□□ 0.77
Ctcf-201ENSMUST00000005841 Krt85Q9Z2T6 507 aa19.89■□□□□ 0.77
Ctcf-201ENSMUST00000005841 Zkscan4Q5SZT6 480 aa19.88■□□□□ 0.77
Ctcf-201ENSMUST00000005841 Ano10Q8BH79 659 aa19.88■□□□□ 0.77
Ctcf-201ENSMUST00000005841 Nlgn1Q99K10 843 aa19.88■□□□□ 0.77
Ctcf-201ENSMUST00000005841 Kiaa1524Q8BWY9 907 aa19.88■□□□□ 0.77
Ctcf-201ENSMUST00000005841 Cep57l1Q8VDS7 400 aa19.88■□□□□ 0.77
Ctcf-201ENSMUST00000005841 TrdnE9Q9K5 693 aa19.87■□□□□ 0.77
Ctcf-201ENSMUST00000005841 Trim59Q922Y2 403 aa19.87■□□□□ 0.77
Ctcf-201ENSMUST00000005841 Siglec1Q62230 1695 aa19.87■□□□□ 0.77
Ctcf-201ENSMUST00000005841 Slc20a2Q80UP8 656 aa19.86■□□□□ 0.77
Ctcf-201ENSMUST00000005841 Zap70P43404 618 aa19.86■□□□□ 0.77
Ctcf-201ENSMUST00000005841 Cers3Q1A3B0 383 aa19.86■□□□□ 0.77
Ctcf-201ENSMUST00000005841 Cfap58B2RW38 873 aa19.86■□□□□ 0.77
Ctcf-201ENSMUST00000005841 Echdc1Q9D9V3 322 aa19.86■□□□□ 0.77
Ctcf-201ENSMUST00000005841 Ano1Q8BHY3 960 aa19.85■□□□□ 0.77
Ctcf-201ENSMUST00000005841 Col1a2Q01149 1372 aa19.85■□□□□ 0.77
Ctcf-201ENSMUST00000005841 Tcof1O08784 1320 aaKnown RBP19.85■□□□□ 0.77
Ctcf-201ENSMUST00000005841 Nckap5lQ6GQX2 1323 aa19.85■□□□□ 0.77
Ctcf-201ENSMUST00000005841 Tpm1P58771 284 aa19.85■□□□□ 0.77
Ctcf-201ENSMUST00000005841 Zbtb3Q91X45 518 aa19.85■□□□□ 0.77
Ctcf-201ENSMUST00000005841 Prr29B1ARI9 187 aa19.84■□□□□ 0.77
Ctcf-201ENSMUST00000005841 Q8BZJ8 459 aa19.84■□□□□ 0.77
Ctcf-201ENSMUST00000005841 Cdca8Q8BHX3 289 aa19.84■□□□□ 0.77
Ctcf-201ENSMUST00000005841 Elf2Q9JHC9 593 aa19.84■□□□□ 0.77
Ctcf-201ENSMUST00000005841 Adamtsl3G3UXC7 1706 aa19.84■□□□□ 0.77
Ctcf-201ENSMUST00000005841 Rsph4aQ8BYM7 716 aa19.84■□□□□ 0.77
Ctcf-201ENSMUST00000005841 Polr3dQ91WD1 398 aa19.84■□□□□ 0.77
Ctcf-201ENSMUST00000005841 Cnpy2Q9QXT0 182 aa19.84■□□□□ 0.77
Ctcf-201ENSMUST00000005841 Aox2Q5SGK3 1345 aa19.83■□□□□ 0.77
Ctcf-201ENSMUST00000005841 Atp2b1G5E829 1220 aa19.83■□□□□ 0.77
Ctcf-201ENSMUST00000005841 Rgs9O54828 675 aa19.83■□□□□ 0.77
Ctcf-201ENSMUST00000005841 Emc10Q3TAS6 258 aa19.83■□□□□ 0.77
Ctcf-201ENSMUST00000005841 Stx1aO35526 288 aa19.83■□□□□ 0.76
Ctcf-201ENSMUST00000005841 Itga6Q61739 1091 aa19.83■□□□□ 0.76
Ctcf-201ENSMUST00000005841 ZwintQ9CQU5 252 aa19.83■□□□□ 0.76
Ctcf-201ENSMUST00000005841 Fmnl2A2APV2 1086 aa19.83■□□□□ 0.76
Ctcf-201ENSMUST00000005841 Klra1P20937 262 aa19.83■□□□□ 0.76
Ctcf-201ENSMUST00000005841 Arhgef1Q61210 920 aaKnown RBP19.83■□□□□ 0.76
Ctcf-201ENSMUST00000005841 Tnks1bp1P58871 1720 aa19.82■□□□□ 0.76
Ctcf-201ENSMUST00000005841 Hoxc9P09633 260 aa19.82■□□□□ 0.76
Ctcf-201ENSMUST00000005841 Cdc37Q61081 379 aa19.82■□□□□ 0.76
Ctcf-201ENSMUST00000005841 Paxbp1P58501 919 aa19.82■□□□□ 0.76
Ctcf-201ENSMUST00000005841 Q3TQI7 289 aaKnown RBP19.82■□□□□ 0.76
Ctcf-201ENSMUST00000005841 Ano8Q6PB70 1060 aa19.82■□□□□ 0.76
Ctcf-201ENSMUST00000005841 Telo2Q9DC40 840 aaKnown RBP19.82■□□□□ 0.76
Ctcf-201ENSMUST00000005841 Psma5Q9Z2U1 241 aaKnown RBP19.82■□□□□ 0.76
Ctcf-201ENSMUST00000005841 Arhgap4B1AUY3 965 aa19.82■□□□□ 0.76
Ctcf-201ENSMUST00000005841 Znf568E9PYI1 671 aa19.82■□□□□ 0.76
Ctcf-201ENSMUST00000005841 Rtel1Q0VGM9 1203 aa19.82■□□□□ 0.76
Ctcf-201ENSMUST00000005841 Ric8aQ3TIR3 530 aa19.82■□□□□ 0.76
Ctcf-201ENSMUST00000005841 Ppp1r10Q80W00 888 aaKnown RBP19.82■□□□□ 0.76
Ctcf-201ENSMUST00000005841 Afap1Q80YS6 731 aa19.82■□□□□ 0.76
Ctcf-201ENSMUST00000005841 Usp44Q8C2S0 711 aa19.82■□□□□ 0.76
Ctcf-201ENSMUST00000005841 Hmg20bQ9Z104 317 aa19.82■□□□□ 0.76
Ctcf-201ENSMUST00000005841 Trap1aP19473 224 aa19.81■□□□□ 0.76
Ctcf-201ENSMUST00000005841 Znf532Q6NXK2 1036 aa19.81■□□□□ 0.76
Ctcf-201ENSMUST00000005841 Mtmr3Q8K296 1196 aa19.81■□□□□ 0.76
Ctcf-201ENSMUST00000005841 Tceanc2Q8R2M0 207 aa19.81■□□□□ 0.76
Ctcf-201ENSMUST00000005841 Ddx11Q6AXC6 880 aa19.81■□□□□ 0.76
Ctcf-201ENSMUST00000005841 Dnm3Q8BZ98 863 aa19.81■□□□□ 0.76
Ctcf-201ENSMUST00000005841 EcsitQ9QZH6 435 aa19.81■□□□□ 0.76
Ctcf-201ENSMUST00000005841 Tulp1Q9Z273 543 aa19.81■□□□□ 0.76
Ctcf-201ENSMUST00000005841 Sall1Q9ER74 1322 aa19.8■□□□□ 0.76
Ctcf-201ENSMUST00000005841 Zbtb45Q52KG4 520 aa19.8■□□□□ 0.76
Ctcf-201ENSMUST00000005841 Slu7Q8BHJ9 585 aa19.8■□□□□ 0.76
Ctcf-201ENSMUST00000005841 Tceal9Q9DD24 104 aa19.8■□□□□ 0.76
Ctcf-201ENSMUST00000005841 Stat1P42225 749 aa19.8■□□□□ 0.76
Ctcf-201ENSMUST00000005841 Pa2g4P50580 394 aaKnown RBP19.8■□□□□ 0.76
Ctcf-201ENSMUST00000005841 Polr3gQ6NXY9 223 aa19.8■□□□□ 0.76
Ctcf-201ENSMUST00000005841 Prkag3Q8BGM7 489 aa19.8■□□□□ 0.76
Ctcf-201ENSMUST00000005841 HellsQ60848 821 aa19.8■□□□□ 0.76
Ctcf-201ENSMUST00000005841 Frmd3Q8BHD4 595 aa19.8■□□□□ 0.76
Ctcf-201ENSMUST00000005841 Filip1Q9CS72 1211 aa19.8■□□□□ 0.76
Ctcf-201ENSMUST00000005841 Ank1Q02357 1862 aa19.8■□□□□ 0.76
Ctcf-201ENSMUST00000005841 Samsn1P57725 372 aa19.79■□□□□ 0.76
Ctcf-201ENSMUST00000005841 Tubb6Q922F4 447 aa19.79■□□□□ 0.76
Ctcf-201ENSMUST00000005841 Ccdc121E9Q6D3 323 aa19.79■□□□□ 0.76
Ctcf-201ENSMUST00000005841 Serpinb6bO08804 377 aa19.79■□□□□ 0.76
Ctcf-201ENSMUST00000005841 Mdm2P23804 489 aa19.78■□□□□ 0.76
Ctcf-201ENSMUST00000005841 Ift57Q8BXG3 429 aa19.78■□□□□ 0.76
Ctcf-201ENSMUST00000005841 Exosc10P56960 887 aaKnown RBP19.78■□□□□ 0.76
Retrieved 100 of 22,080 RNA–protein pairs in 36.8 ms