RNA–Protein interactions for RNA: snR54

snR54, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR54, Length 86 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR54snR54 ERP6P53198 216 aa4.01□□□□□ -1.77
snR54snR54 YLR040CQ07988 224 aa4.01□□□□□ -1.77
snR54snR54 FBP1P09201 348 aa4□□□□□ -1.77
snR54snR54 URA1P28272 314 aaPredicted RBP4□□□□□ -1.77
snR54snR54 SEC21P32074 935 aaKnown RBP4□□□□□ -1.77
snR54snR54 EFT1P32324 842 aaKnown RBP4□□□□□ -1.77
snR54snR54 CDC11P32458 415 aa4□□□□□ -1.77
snR54snR54 TYE7P33122 291 aaPredicted RBP4□□□□□ -1.77
snR54snR54 HDA1P53973 706 aa4□□□□□ -1.77
snR54snR54 CTF4Q01454 927 aa4□□□□□ -1.77
snR54snR54 YKR011CQ02209 353 aa4□□□□□ -1.77
snR54snR54 VPS30Q02948 557 aa4□□□□□ -1.77
snR54snR54 SPO75Q07798 868 aa4□□□□□ -1.77
snR54snR54 GUP2Q08929 609 aa4□□□□□ -1.77
snR54snR54 TRM13Q12383 476 aa4□□□□□ -1.77
snR54snR54 PET10P36139 283 aa3.99□□□□□ -1.77
snR54snR54 SDP1P40479 209 aa3.99□□□□□ -1.77
snR54snR54 TIM54P47045 478 aa3.99□□□□□ -1.77
snR54snR54 NPL3Q01560 414 aaKnown RBP RIP-Chip data3.99□□□□□ -1.77not detected
snR54snR54 OSH2Q12451 1283 aa3.99□□□□□ -1.77
snR54snR54 SUL1P38359 859 aa3.98□□□□□ -1.77
snR54snR54 NOP7P53261 605 aaKnown RBP3.98□□□□□ -1.77
snR54snR54 YGR125WP53273 1036 aa3.98□□□□□ -1.77
snR54snR54 URN1Q06525 465 aaKnown RBP3.98□□□□□ -1.77
snR54snR54 ENV7Q12003 364 aa3.98□□□□□ -1.77
snR54snR54 TUB3P09734 445 aaKnown RBP3.97□□□□□ -1.77
snR54snR54 HSP60P19882 572 aaKnown RBP3.97□□□□□ -1.77
snR54snR54 RAD53P22216 821 aa3.97□□□□□ -1.77
snR54snR54 YHR020WP38708 688 aaKnown RBP3.97□□□□□ -1.77
snR54snR54 CTF8P38877 133 aa3.97□□□□□ -1.77
snR54snR54 PEX19Q07418 342 aa3.97□□□□□ -1.77
snR54snR54 YOL073CQ08232 322 aa3.97□□□□□ -1.77
snR54snR54 RPS9AO13516 197 aaKnown RBP3.96□□□□□ -1.78
snR54snR54 CIT1P00890 479 aa3.96□□□□□ -1.78
snR54snR54 TRP4P07285 380 aaPredicted RBP3.96□□□□□ -1.78
snR54snR54 MPH2P0CD99 609 aa3.96□□□□□ -1.78
snR54snR54 ERG4P25340 473 aa3.96□□□□□ -1.78
snR54snR54 ERG5P54781 538 aa3.96□□□□□ -1.78
snR54snR54 YMR206WQ03695 313 aa3.96□□□□□ -1.78
snR54snR54 TAF8Q03750 510 aa3.96□□□□□ -1.78
snR54snR54 HAL9Q12180 1030 aa3.96□□□□□ -1.78
snR54snR54 PRP4P20053 465 aaKnown RBP3.95□□□□□ -1.78
snR54snR54 MOH1P38191 138 aa3.95□□□□□ -1.78
snR54snR54 UBP6P43593 499 aaKnown RBP3.95□□□□□ -1.78
snR54snR54 PUS2P53167 370 aa3.95□□□□□ -1.78
snR54snR54 PPM2Q08282 695 aa3.95□□□□□ -1.78
snR54snR54 FLC1Q08967 793 aa3.95□□□□□ -1.78
snR54snR54 TOM70P07213 617 aaKnown RBP3.94□□□□□ -1.78
snR54snR54 BET3P36149 193 aa3.94□□□□□ -1.78
snR54snR54 YHR078WP38799 552 aa3.94□□□□□ -1.78
snR54snR54 GYP8P43570 497 aa3.94□□□□□ -1.78
snR54snR54 JSN1P47135 1091 aaKnown RBP RIP-Chip data3.94□□□□□ -1.78not detected
snR54snR54 HUL5P53119 910 aa3.94□□□□□ -1.78
snR54snR54 MRPS35P53292 345 aa3.94□□□□□ -1.78
snR54snR54 DUS1P53759 423 aaKnown RBP3.94□□□□□ -1.78
snR54snR54 LRS4Q04087 347 aaKnown RBP3.94□□□□□ -1.78
snR54snR54 YDL124WQ07551 312 aaKnown RBP3.94□□□□□ -1.78
snR54snR54 YOR022CQ12204 715 aa3.94□□□□□ -1.78
snR54snR54 SWM1Q12379 170 aa3.94□□□□□ -1.78
snR54snR54 TAD3Q9URQ3 322 aa3.94□□□□□ -1.78
snR54snR54 DAL7P21826 554 aa3.93□□□□□ -1.78
snR54snR54 YCL002CP25565 263 aa3.93□□□□□ -1.78
snR54snR54 CYS3P31373 394 aaKnown RBP3.93□□□□□ -1.78
snR54snR54 CTF13P35203 478 aa3.93□□□□□ -1.78
snR54snR54 OAR1P35731 278 aa3.93□□□□□ -1.78
snR54snR54 KTR4P38131 464 aa3.93□□□□□ -1.78
snR54snR54 RTA1P53047 317 aa3.93□□□□□ -1.78
snR54snR54 TAD1P53065 400 aa3.93□□□□□ -1.78
snR54snR54 VHR1P40522 640 aa3.92□□□□□ -1.78
snR54snR54 HUL4P40985 892 aa3.92□□□□□ -1.78
snR54snR54 NIT3P49954 291 aa3.92□□□□□ -1.78
snR54snR54 NOG2P53742 486 aaKnown RBP3.92□□□□□ -1.78
snR54snR54 RNT1Q02555 471 aa3.92□□□□□ -1.78
snR54snR54 MUK1Q02866 612 aa3.92□□□□□ -1.78
snR54snR54 TRM11Q12463 433 aa3.92□□□□□ -1.78
snR54snR54 ALG7P07286 448 aa3.91□□□□□ -1.78
snR54snR54 EMC3P36039 253 aa3.91□□□□□ -1.78
snR54snR54 RPP1P38786 293 aa3.91□□□□□ -1.78
snR54snR54 RSP5P39940 809 aaKnown RBP3.91□□□□□ -1.78
snR54snR54 FKH2P41813 862 aa3.91□□□□□ -1.78
snR54snR54 YGR283CP53336 341 aaPredicted RBP3.91□□□□□ -1.78
snR54snR54 BDF2Q07442 638 aa3.91□□□□□ -1.78
snR54snR54 PRC1P00729 532 aa3.9□□□□□ -1.79
snR54snR54 CAN1P04817 590 aa3.9□□□□□ -1.79
snR54snR54 PPR1P07272 904 aaPredicted RBP3.9□□□□□ -1.79
snR54snR54 ELO3P40319 345 aa3.9□□□□□ -1.79
snR54snR54 ALG2P43636 503 aa3.9□□□□□ -1.79
snR54snR54 YJL049WP47048 450 aa3.9□□□□□ -1.79
snR54snR54 STB4P50104 949 aa3.9□□□□□ -1.79
snR54snR54 UBA2P52488 636 aa3.9□□□□□ -1.79
snR54snR54 ASI2P53895 289 aa3.9□□□□□ -1.79
snR54snR54 GIS1Q03833 894 aa3.9□□□□□ -1.79
snR54snR54 SAP190P36123 1033 aa3.89□□□□□ -1.79
snR54snR54 SAK1P38990 1142 aa3.89□□□□□ -1.79
snR54snR54 OMS1Q06668 471 aa3.89□□□□□ -1.79
snR54snR54 FRE5Q08908 694 aa3.89□□□□□ -1.79
snR54snR54 CDC53Q12018 815 aaKnown RBP3.89□□□□□ -1.79
snR54snR54 PHR1P05066 565 aaKnown RBP RIP-Chip data3.88□□□□□ -1.79not detected
snR54snR54 MET3P08536 511 aa3.88□□□□□ -1.79
snR54snR54 PPS1P38148 807 aa3.88□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms