RNA–Protein interactions for RNA: YPR173C

VPS4, Transcript of AAA-ATPase involved in multivesicular body (MVB) protein sorting, yeastyeast

Gene VPS4, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS4YPR173C YDR341CQ05506 607 aaKnown RBP6.47□□□□□ -1.37
VPS4YPR173C YLR001CQ07895 862 aa6.47□□□□□ -1.37
VPS4YPR173C CWC2Q12046 339 aaPredicted RBP6.47□□□□□ -1.37
VPS4YPR173C RIM15P43565 1770 aa6.46□□□□□ -1.37
VPS4YPR173C RAD3P06839 778 aa6.46□□□□□ -1.38
VPS4YPR173C GAL11P19659 1081 aa6.46□□□□□ -1.38
VPS4YPR173C CDC60P26637 1090 aaKnown RBP6.46□□□□□ -1.38
VPS4YPR173C UBC6P33296 250 aaPredicted RBP6.46□□□□□ -1.38
VPS4YPR173C RPT3P33298 428 aaKnown RBP6.46□□□□□ -1.38
VPS4YPR173C LOS1P33418 1100 aaPredicted RBP6.46□□□□□ -1.38
VPS4YPR173C RPC25P35718 212 aa6.46□□□□□ -1.38
VPS4YPR173C ILM1P47155 203 aa6.46□□□□□ -1.38
VPS4YPR173C BTN2P53286 410 aa6.46□□□□□ -1.38
VPS4YPR173C YML119WQ03208 357 aa6.46□□□□□ -1.38
VPS4YPR173C MYO5Q04439 1219 aaKnown RBP6.46□□□□□ -1.38
VPS4YPR173C TOS4Q06266 489 aa6.46□□□□□ -1.38
VPS4YPR173C SPO75Q07798 868 aa6.46□□□□□ -1.38
VPS4YPR173C RIO1Q12196 484 aaKnown RBP6.46□□□□□ -1.38
VPS4YPR173C NYV1Q12255 253 aa6.46□□□□□ -1.38
VPS4YPR173C COBP00163 385 aa6.45□□□□□ -1.38
VPS4YPR173C RPB2P08518 1224 aaKnown RBP6.45□□□□□ -1.38
VPS4YPR173C GFA1P14742 717 aaKnown RBP6.45□□□□□ -1.38
VPS4YPR173C THR4P16120 514 aaKnown RBP6.45□□□□□ -1.38
VPS4YPR173C OM45P16547 393 aa6.45□□□□□ -1.38
VPS4YPR173C SEC14P24280 304 aaKnown RBP6.45□□□□□ -1.38
VPS4YPR173C RAD5P32849 1169 aaPredicted RBP6.45□□□□□ -1.38
VPS4YPR173C SCD5P34758 872 aa6.45□□□□□ -1.38
VPS4YPR173C BOI1P38041 980 aaKnown RBP6.45□□□□□ -1.38
VPS4YPR173C YBR197CP38306 217 aa6.45□□□□□ -1.38
VPS4YPR173C ERG7P38604 731 aa6.45□□□□□ -1.38
VPS4YPR173C STT3P39007 718 aaKnown RBP6.45□□□□□ -1.38
VPS4YPR173C CSM2P40465 213 aa6.45□□□□□ -1.38
VPS4YPR173C YIR042CP40586 236 aa6.45□□□□□ -1.38
VPS4YPR173C YJR039WP47107 1121 aa6.45□□□□□ -1.38
VPS4YPR173C YJR098CP47139 656 aa6.45□□□□□ -1.38
VPS4YPR173C SGM1P47166 707 aa6.45□□□□□ -1.38
VPS4YPR173C CCM1P48237 864 aaPredicted RBP6.45□□□□□ -1.38
VPS4YPR173C UBA2P52488 636 aa6.45□□□□□ -1.38
VPS4YPR173C FOX2Q02207 900 aaKnown RBP6.45□□□□□ -1.38
VPS4YPR173C URH1Q04179 340 aa6.45□□□□□ -1.38
VPS4YPR173C IMH1Q06704 911 aaKnown RBP6.45□□□□□ -1.38
VPS4YPR173C THI3Q07471 609 aa6.45□□□□□ -1.38
VPS4YPR173C YOL075CQ08234 1294 aa6.45□□□□□ -1.38
VPS4YPR173C TY4A-HQ6Q5P6 413 aa6.45□□□□□ -1.38
VPS4YPR173C JIP3O13555 125 aa6.44□□□□□ -1.38
VPS4YPR173C ARG1P22768 420 aa6.44□□□□□ -1.38
VPS4YPR173C RPC53P25441 422 aa6.44□□□□□ -1.38
VPS4YPR173C MGM1P32266 881 aa6.44□□□□□ -1.38
VPS4YPR173C DAL1P32375 460 aa6.44□□□□□ -1.38
VPS4YPR173C ZUO1P32527 433 aaKnown RBP6.44□□□□□ -1.38
VPS4YPR173C ISC10P32645 267 aa6.44□□□□□ -1.38
VPS4YPR173C CBF5P33322 483 aaKnown RBP RIP-Chip data6.44□□□□□ -1.38not detected
VPS4YPR173C YKL091CP33324 310 aaKnown RBP6.44□□□□□ -1.38
VPS4YPR173C OAF3P36023 863 aa6.44□□□□□ -1.38
VPS4YPR173C YKR018CP36114 725 aa6.44□□□□□ -1.38
VPS4YPR173C GRS1P38088 690 aaKnown RBP6.44□□□□□ -1.38
VPS4YPR173C HXT5P38695 592 aa6.44□□□□□ -1.38
VPS4YPR173C SET5P38890 526 aaKnown RBP6.44□□□□□ -1.38
VPS4YPR173C RET3P53600 189 aa6.44□□□□□ -1.38
VPS4YPR173C RPT6Q01939 405 aaKnown RBP6.44□□□□□ -1.38
VPS4YPR173C ADA2Q02336 434 aa6.44□□□□□ -1.38
VPS4YPR173C TRS120Q04183 1289 aa6.44□□□□□ -1.38
VPS4YPR173C UBX2Q04228 584 aa6.44□□□□□ -1.38
VPS4YPR173C GIS4Q04233 774 aa6.44□□□□□ -1.38
VPS4YPR173C LCB5Q06147 687 aaKnown RBP6.44□□□□□ -1.38
VPS4YPR173C SSB1P11484 613 aaKnown RBP6.43□□□□□ -1.38
VPS4YPR173C KRS1P15180 591 aaKnown RBP6.43□□□□□ -1.38
VPS4YPR173C STI1P15705 589 aaKnown RBP RIP-Chip data6.43□□□□□ -1.38not detected
VPS4YPR173C RIT1P23796 513 aa6.43□□□□□ -1.38
VPS4YPR173C SIP3P38717 1229 aa6.43□□□□□ -1.38
VPS4YPR173C TOM71P38825 639 aaKnown RBP6.43□□□□□ -1.38
VPS4YPR173C SSB2P40150 613 aaKnown RBP6.43□□□□□ -1.38
VPS4YPR173C ATG1P53104 897 aa6.43□□□□□ -1.38
VPS4YPR173C SPC24Q04477 213 aa6.43□□□□□ -1.38
VPS4YPR173C ECI1Q05871 280 aa6.43□□□□□ -1.38
VPS4YPR173C CMS1Q07897 291 aaKnown RBP6.43□□□□□ -1.38
VPS4YPR173C SIL1Q08199 421 aa6.43□□□□□ -1.38
VPS4YPR173C SLK19Q08581 821 aaKnown RBP6.43□□□□□ -1.38
VPS4YPR173C TAF10Q12030 206 aa6.43□□□□□ -1.38
VPS4YPR173C CIT1P00890 479 aa6.42□□□□□ -1.38
VPS4YPR173C TUF1P02992 437 aaKnown RBP6.42□□□□□ -1.38
VPS4YPR173C ARG4P04076 463 aaPredicted RBP6.42□□□□□ -1.38
VPS4YPR173C PYC1P11154 1178 aaKnown RBP6.42□□□□□ -1.38
VPS4YPR173C TUP1P16649 713 aa6.42□□□□□ -1.38
VPS4YPR173C MRPS28P21771 286 aa6.42□□□□□ -1.38
VPS4YPR173C APL1P27351 700 aa6.42□□□□□ -1.38
VPS4YPR173C CCT2P39076 527 aaKnown RBP6.42□□□□□ -1.38
VPS4YPR173C CCT3P39077 534 aaKnown RBP6.42□□□□□ -1.38
VPS4YPR173C JJJ2P46997 583 aa6.42□□□□□ -1.38
VPS4YPR173C YGR153WP48238 217 aa6.42□□□□□ -1.38
VPS4YPR173C KAP114P53067 1004 aa6.42□□□□□ -1.38
VPS4YPR173C SDA1P53313 767 aaKnown RBP6.42□□□□□ -1.38
VPS4YPR173C EEB1Q02891 456 aa6.42□□□□□ -1.38
VPS4YPR173C VPS30Q02948 557 aa6.42□□□□□ -1.38
VPS4YPR173C YLR346CQ06139 101 aa6.42□□□□□ -1.38
VPS4YPR173C UTP4Q06679 776 aaKnown RBP6.42□□□□□ -1.38
VPS4YPR173C CSR1Q06705 408 aaKnown RBP6.42□□□□□ -1.38
VPS4YPR173C MLH2Q07980 695 aa6.42□□□□□ -1.38
VPS4YPR173C DPH6Q12429 685 aa6.42□□□□□ -1.38
VPS4YPR173C ZRT2Q12436 422 aa6.42□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 11 ms