RNA–Protein interactions for RNA: YPL217C

BMS1, Transcript of GTPase required for ribosomal subunit synthesis and rRNA processing, yeast

Gene BMS1, Length 3,552 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BMS1	YPL217C	HMG1	P12683	1054 aa		3.58	□□□□□ -1.84
BMS1	YPL217C	HCA4	P20448	770 aa	Known RBP	3.58	□□□□□ -1.84
BMS1	YPL217C	YME1	P32795	747 aa		3.58	□□□□□ -1.84
BMS1	YPL217C	PTC3	P34221	468 aa	Known RBP	3.58	□□□□□ -1.84
BMS1	YPL217C	YEL1	P34225	687 aa		3.58	□□□□□ -1.84
BMS1	YPL217C	HES1	P35843	434 aa		3.58	□□□□□ -1.84
BMS1	YPL217C	YKL222C	P35995	705 aa		3.58	□□□□□ -1.84
BMS1	YPL217C	MNN2	P38069	597 aa		3.58	□□□□□ -1.84
BMS1	YPL217C	RFC3	P38629	340 aa		3.58	□□□□□ -1.84
BMS1	YPL217C	MKT1	P40850	830 aa	Known RBP	3.58	□□□□□ -1.84
BMS1	YPL217C	SEC27	P41811	889 aa	Known RBP	3.58	□□□□□ -1.84
BMS1	YPL217C	TAD1	P53065	400 aa		3.58	□□□□□ -1.84
BMS1	YPL217C	ZPR1	P53303	486 aa	Known RBP	3.58	□□□□□ -1.84
BMS1	YPL217C	YNL115C	P53925	644 aa		3.58	□□□□□ -1.84
BMS1	YPL217C	RPM2	Q02773	1202 aa		3.58	□□□□□ -1.84
BMS1	YPL217C	URH1	Q04179	340 aa		3.58	□□□□□ -1.84
BMS1	YPL217C	KAR5	Q04746	504 aa		3.58	□□□□□ -1.84
BMS1	YPL217C	GTB1	Q04924	702 aa		3.58	□□□□□ -1.84
BMS1	YPL217C	SSK22	P25390	1331 aa	Predicted RBP	3.58	□□□□□ -1.84
BMS1	YPL217C	HIS3	P06633	220 aa		3.58	□□□□□ -1.84
BMS1	YPL217C	CDC6	P09119	513 aa		3.58	□□□□□ -1.84
BMS1	YPL217C	MSM1	P22438	575 aa		3.58	□□□□□ -1.84
BMS1	YPL217C	CPR3	P25719	182 aa		3.58	□□□□□ -1.84
BMS1	YPL217C	HIR2	P32480	875 aa		3.58	□□□□□ -1.84
BMS1	YPL217C	CLG1	P35190	452 aa		3.58	□□□□□ -1.84
BMS1	YPL217C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	3.58	□□□□□ -1.84	not detected
BMS1	YPL217C	LSG1	P53145	640 aa	Known RBP	3.58	□□□□□ -1.84
BMS1	YPL217C	AAD16	Q02895	342 aa		3.58	□□□□□ -1.84
BMS1	YPL217C	TDA9	Q04545	1251 aa		3.58	□□□□□ -1.84
BMS1	YPL217C	ATG17	Q06410	417 aa		3.58	□□□□□ -1.84
BMS1	YPL217C	OPY2	Q06810	360 aa		3.58	□□□□□ -1.84
BMS1	YPL217C	RCN2	Q12044	265 aa		3.58	□□□□□ -1.84
BMS1	YPL217C	SPO21	Q12411	609 aa		3.58	□□□□□ -1.84
BMS1	YPL217C	RSR1	P13856	272 aa		3.58	□□□□□ -1.84
BMS1	YPL217C	REC107	P21651	314 aa		3.58	□□□□□ -1.84
BMS1	YPL217C	RPC34	P32910	317 aa		3.58	□□□□□ -1.84
BMS1	YPL217C	KES1	P35844	434 aa	Known RBP	3.58	□□□□□ -1.84
BMS1	YPL217C	PGM2	P37012	569 aa	Known RBP	3.58	□□□□□ -1.84
BMS1	YPL217C	MRX3	P38172	270 aa		3.58	□□□□□ -1.84
BMS1	YPL217C	BRL1	P38770	471 aa		3.58	□□□□□ -1.84
BMS1	YPL217C	IES5	P40060	125 aa		3.58	□□□□□ -1.84
BMS1	YPL217C	SAD1	P43589	448 aa		3.58	□□□□□ -1.84
BMS1	YPL217C	YGL176C	P46945	554 aa		3.58	□□□□□ -1.84
BMS1	YPL217C	URB2	P47108	1174 aa		3.58	□□□□□ -1.84
BMS1	YPL217C	UBP15	P50101	1230 aa		3.58	□□□□□ -1.84
BMS1	YPL217C	CIK1	Q01649	594 aa		3.58	□□□□□ -1.84
BMS1	YPL217C	ATP25	Q03153	612 aa		3.58	□□□□□ -1.84
BMS1	YPL217C	GIR2	Q03768	265 aa	Predicted RBP	3.58	□□□□□ -1.84
BMS1	YPL217C	YOR289W	Q12012	251 aa	Predicted RBP	3.58	□□□□□ -1.84
BMS1	YPL217C	RRP6	Q12149	733 aa	Known RBP	3.58	□□□□□ -1.84
BMS1	YPL217C	IES3	Q12345	250 aa		3.58	□□□□□ -1.84
BMS1	YPL217C	YOL098C	Q12496	1037 aa		3.58	□□□□□ -1.84
BMS1	YPL217C	FLO1	P32768	1537 aa		3.58	□□□□□ -1.84
BMS1	YPL217C	UBA1	P22515	1024 aa	Known RBP	3.57	□□□□□ -1.84
BMS1	YPL217C	EUG1	P32474	517 aa		3.57	□□□□□ -1.84
BMS1	YPL217C	HSP78	P33416	811 aa		3.57	□□□□□ -1.84
BMS1	YPL217C	SQT1	P35184	431 aa		3.57	□□□□□ -1.84
BMS1	YPL217C	BUD6	P41697	788 aa		3.57	□□□□□ -1.84
BMS1	YPL217C	EMW1	P42842	904 aa	Known RBP	3.57	□□□□□ -1.84
BMS1	YPL217C	YJL055W	P47044	245 aa		3.57	□□□□□ -1.84
BMS1	YPL217C	RFX1	P48743	811 aa		3.57	□□□□□ -1.84
BMS1	YPL217C	HEH2	Q03281	663 aa		3.57	□□□□□ -1.84
BMS1	YPL217C	YIG1	Q08956	461 aa		3.57	□□□□□ -1.84
BMS1	YPL217C	PCL8	Q08966	492 aa		3.57	□□□□□ -1.84
BMS1	YPL217C	GET3	Q12154	354 aa	Known RBP	3.57	□□□□□ -1.84
BMS1	YPL217C	NOT5	Q12514	560 aa	Predicted RBP	3.57	□□□□□ -1.84
BMS1	YPL217C	ATP2	P00830	511 aa	Known RBP	3.57	□□□□□ -1.84
BMS1	YPL217C	CLN3	P13365	580 aa		3.57	□□□□□ -1.84
BMS1	YPL217C	RPC19	P28000	142 aa	Known RBP	3.57	□□□□□ -1.84
BMS1	YPL217C	YBL055C	P34220	418 aa	Predicted RBP	3.57	□□□□□ -1.84
BMS1	YPL217C	COY1	P34237	679 aa		3.57	□□□□□ -1.84
BMS1	YPL217C	CCT2	P39076	527 aa	Known RBP	3.57	□□□□□ -1.84
BMS1	YPL217C	ATG32	P40458	529 aa		3.57	□□□□□ -1.84
BMS1	YPL217C	VTC2	P43585	828 aa		3.57	□□□□□ -1.84
BMS1	YPL217C	PSP1	P50896	841 aa	Known RBP	3.57	□□□□□ -1.84
BMS1	YPL217C	LSC2	P53312	427 aa		3.57	□□□□□ -1.84
BMS1	YPL217C	DIG1	Q03063	452 aa	Known RBP	3.57	□□□□□ -1.84
BMS1	YPL217C	YMR187C	Q03236	431 aa		3.57	□□□□□ -1.84
BMS1	YPL217C	PKH1	Q03407	766 aa		3.57	□□□□□ -1.84
BMS1	YPL217C	SOV1	Q04748	898 aa		3.57	□□□□□ -1.84
BMS1	YPL217C	FRA1	Q07825	749 aa		3.57	□□□□□ -1.84
BMS1	YPL217C	NOP12	Q08208	459 aa	Known RBP	3.57	□□□□□ -1.84
BMS1	YPL217C	WHI5	Q12416	295 aa		3.57	□□□□□ -1.84
BMS1	YPL217C	UBR2	Q07963	1872 aa		3.57	□□□□□ -1.84
BMS1	YPL217C	HXK1	P04806	485 aa	Known RBP	3.57	□□□□□ -1.84
BMS1	YPL217C	HMG2	P12684	1045 aa		3.57	□□□□□ -1.84
BMS1	YPL217C	POL3	P15436	1097 aa		3.57	□□□□□ -1.84
BMS1	YPL217C	HEM15	P16622	393 aa		3.57	□□□□□ -1.84
BMS1	YPL217C	ALG1	P16661	449 aa		3.57	□□□□□ -1.84
BMS1	YPL217C	APL1	P27351	700 aa		3.57	□□□□□ -1.84
BMS1	YPL217C	EAP1	P36041	632 aa	Known RBP	3.57	□□□□□ -1.84
BMS1	YPL217C	TIF4631	P39935	952 aa	Known RBP	3.57	□□□□□ -1.84
BMS1	YPL217C	COS6	P53344	381 aa		3.57	□□□□□ -1.84
BMS1	YPL217C	BNI4	P53858	892 aa		3.57	□□□□□ -1.84
BMS1	YPL217C	RAD30	Q04049	632 aa		3.57	□□□□□ -1.84
BMS1	YPL217C	YPQ2	Q06328	317 aa		3.57	□□□□□ -1.84
BMS1	YPL217C	VIP1	Q06685	1146 aa	Known RBP	3.57	□□□□□ -1.84
BMS1	YPL217C	GPI13	Q07830	1017 aa		3.57	□□□□□ -1.84
BMS1	YPL217C	TRE1	Q08919	783 aa		3.57	□□□□□ -1.84
BMS1	YPL217C	YLR278C	Q05854	1341 aa		3.57	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 111.3 ms