RNA–Protein interactions for RNA: YPL203W

TPK2, Transcript of cAMP-dependent protein kinase catalytic subunit, yeast

Gene TPK2, Length 1,143 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPK2	YPL203W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.31	□□□□□ -1.72	not detected
TPK2	YPL203W	GPB1	Q08886	897 aa		4.31	□□□□□ -1.72
TPK2	YPL203W	IKI3	Q06706	1349 aa	Known RBP	4.3	□□□□□ -1.72
TPK2	YPL203W	BI4	P03879	638 aa		4.3	□□□□□ -1.72
TPK2	YPL203W	ACE2	P21192	770 aa		4.3	□□□□□ -1.72
TPK2	YPL203W	TYS1	P36421	394 aa	Known RBP	4.3	□□□□□ -1.72
TPK2	YPL203W	PAF1	P38351	445 aa		4.3	□□□□□ -1.72
TPK2	YPL203W	RRT14	P40470	206 aa		4.3	□□□□□ -1.72
TPK2	YPL203W	YKL151C	P36059	337 aa		4.29	□□□□□ -1.72
TPK2	YPL203W	MTC3	P53077	123 aa		4.29	□□□□□ -1.72
TPK2	YPL203W	SIZ1	Q04195	904 aa		4.29	□□□□□ -1.72
TPK2	YPL203W	SPO75	Q07798	868 aa		4.29	□□□□□ -1.72
TPK2	YPL203W	YLL058W	Q12198	575 aa		4.29	□□□□□ -1.72
TPK2	YPL203W	RIB2	Q12362	591 aa	Known RBP	4.29	□□□□□ -1.72
TPK2	YPL203W	PNS1	Q12412	539 aa		4.29	□□□□□ -1.72
TPK2	YPL203W	PDR5	P33302	1511 aa	Known RBP	4.28	□□□□□ -1.72
TPK2	YPL203W	STE11	P23561	717 aa		4.28	□□□□□ -1.72
TPK2	YPL203W	TRM2	P33753	639 aa		4.28	□□□□□ -1.72
TPK2	YPL203W	OCA5	P38738	679 aa		4.28	□□□□□ -1.72
TPK2	YPL203W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.28	□□□□□ -1.72	not detected
TPK2	YPL203W	PFD1	P46988	109 aa		4.28	□□□□□ -1.72
TPK2	YPL203W	MNN10	P50108	393 aa	Known RBP	4.28	□□□□□ -1.72
TPK2	YPL203W	GTF1	P53260	183 aa	Predicted RBP	4.28	□□□□□ -1.72
TPK2	YPL203W	SRP1	Q02821	542 aa	Known RBP	4.28	□□□□□ -1.72
TPK2	YPL203W	HRQ1	Q05549	1077 aa		4.28	□□□□□ -1.72
TPK2	YPL203W	FMP25	Q08023	583 aa		4.28	□□□□□ -1.72
TPK2	YPL203W	GCN2	P15442	1659 aa		4.27	□□□□□ -1.73
TPK2	YPL203W	RAD4	P14736	754 aa		4.27	□□□□□ -1.73
TPK2	YPL203W	PRP9	P19736	530 aa	Known RBP	4.27	□□□□□ -1.73
TPK2	YPL203W	CDC12	P32468	407 aa	Known RBP	4.27	□□□□□ -1.73
TPK2	YPL203W	SAH1	P39954	449 aa	Known RBP	4.27	□□□□□ -1.73
TPK2	YPL203W	MCM6	P53091	1017 aa	Known RBP	4.27	□□□□□ -1.73
TPK2	YPL203W	UTP8	P53276	713 aa	Known RBP	4.27	□□□□□ -1.73
TPK2	YPL203W	MSC2	Q03455	724 aa		4.27	□□□□□ -1.73
TPK2	YPL203W	DUS3	Q06053	668 aa	Known RBP	4.27	□□□□□ -1.73
TPK2	YPL203W	CDC6	P09119	513 aa		4.26	□□□□□ -1.73
TPK2	YPL203W	HCM1	P25364	564 aa		4.26	□□□□□ -1.73
TPK2	YPL203W	RPL8B	P29453	256 aa	Known RBP	4.26	□□□□□ -1.73
TPK2	YPL203W	SCT1	P32784	759 aa		4.26	□□□□□ -1.73
TPK2	YPL203W	LST4	P34239	828 aa		4.26	□□□□□ -1.73
TPK2	YPL203W	VPS62	P53285	467 aa		4.26	□□□□□ -1.73
TPK2	YPL203W	RIA1	P53893	1110 aa		4.26	□□□□□ -1.73
TPK2	YPL203W	YDR306C	Q06640	478 aa		4.26	□□□□□ -1.73
TPK2	YPL203W	MDM38	Q08179	573 aa		4.26	□□□□□ -1.73
TPK2	YPL203W	YOL098C	Q12496	1037 aa		4.26	□□□□□ -1.73
TPK2	YPL203W	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.25	□□□□□ -1.73	not detected
TPK2	YPL203W	EMC1	P25574	760 aa		4.25	□□□□□ -1.73
TPK2	YPL203W	AAR2	P32357	355 aa	Predicted RBP	4.25	□□□□□ -1.73
TPK2	YPL203W	TIM54	P47045	478 aa		4.25	□□□□□ -1.73
TPK2	YPL203W	HFM1	P51979	1187 aa		4.25	□□□□□ -1.73
TPK2	YPL203W	ERP6	P53198	216 aa		4.25	□□□□□ -1.73
TPK2	YPL203W	NSE3	Q05541	303 aa		4.25	□□□□□ -1.73
TPK2	YPL203W	TMA10	Q06177	86 aa		4.25	□□□□□ -1.73
TPK2	YPL203W	EAF1	Q06337	982 aa		4.25	□□□□□ -1.73
TPK2	YPL203W	OSW2	Q12202	724 aa		4.25	□□□□□ -1.73
TPK2	YPL203W	OSH2	Q12451	1283 aa		4.25	□□□□□ -1.73
TPK2	YPL203W	ADE8	P04161	214 aa		4.24	□□□□□ -1.73
TPK2	YPL203W	FUN30	P31380	1131 aa		4.24	□□□□□ -1.73
TPK2	YPL203W	HBS1	P32769	611 aa	Known RBP	4.24	□□□□□ -1.73
TPK2	YPL203W	SIT1	P39980	628 aa		4.24	□□□□□ -1.73
TPK2	YPL203W	ALR2	P43553	858 aa		4.24	□□□□□ -1.73
TPK2	YPL203W	IOC3	P43596	787 aa		4.24	□□□□□ -1.73
TPK2	YPL203W	GCV2	P49095	1034 aa		4.24	□□□□□ -1.73
TPK2	YPL203W	HUL5	P53119	910 aa		4.24	□□□□□ -1.73
TPK2	YPL203W	TPO2	P53283	614 aa		4.24	□□□□□ -1.73
TPK2	YPL203W	SRT1	Q03175	343 aa		4.24	□□□□□ -1.73
TPK2	YPL203W	YAP6	Q03935	383 aa		4.24	□□□□□ -1.73
TPK2	YPL203W	YLR224W	Q05947	369 aa		4.24	□□□□□ -1.73
TPK2	YPL203W	NOP12	Q08208	459 aa	Known RBP	4.24	□□□□□ -1.73
TPK2	YPL203W	HMI1	Q12039	706 aa		4.24	□□□□□ -1.73
TPK2	YPL203W	PUS9	Q12069	462 aa		4.24	□□□□□ -1.73
TPK2	YPL203W	KRE5	P22023	1365 aa		4.24	□□□□□ -1.73
TPK2	YPL203W	HSP60	P19882	572 aa	Known RBP	4.23	□□□□□ -1.73
TPK2	YPL203W	ARE1	P25628	610 aa		4.23	□□□□□ -1.73
TPK2	YPL203W	PPH3	P32345	308 aa		4.23	□□□□□ -1.73
TPK2	YPL203W	CDC11	P32458	415 aa		4.23	□□□□□ -1.73
TPK2	YPL203W	YHR020W	P38708	688 aa	Known RBP	4.23	□□□□□ -1.73
TPK2	YPL203W	GIC1	P38785	314 aa		4.23	□□□□□ -1.73
TPK2	YPL203W	YAP1801	P38856	637 aa		4.23	□□□□□ -1.73
TPK2	YPL203W	GYP7	P48365	746 aa		4.23	□□□□□ -1.73
TPK2	YPL203W	YGR125W	P53273	1036 aa		4.23	□□□□□ -1.73
TPK2	YPL203W	BDF2	Q07442	638 aa		4.23	□□□□□ -1.73
TPK2	YPL203W	XYL2	Q07993	356 aa		4.23	□□□□□ -1.73
TPK2	YPL203W	FLC1	Q08967	793 aa		4.23	□□□□□ -1.73
TPK2	YPL203W	CIT1	P00890	479 aa		4.22	□□□□□ -1.73
TPK2	YPL203W	SRP40	P32583	406 aa	Predicted RBP	4.22	□□□□□ -1.73
TPK2	YPL203W	YKR078W	P36158	585 aa	Known RBP	4.22	□□□□□ -1.73
TPK2	YPL203W	MND2	P40577	368 aa		4.22	□□□□□ -1.73
TPK2	YPL203W	MSE1	P48525	536 aa		4.22	□□□□□ -1.73
TPK2	YPL203W	UBX5	Q06682	500 aa		4.22	□□□□□ -1.73
TPK2	YPL203W	TPO1	Q07824	586 aa		4.22	□□□□□ -1.73
TPK2	YPL203W	CDC53	Q12018	815 aa	Known RBP	4.22	□□□□□ -1.73
TPK2	YPL203W	NTO1	Q12311	748 aa		4.22	□□□□□ -1.73
TPK2	YPL203W	SSM4	P40318	1319 aa		4.21	□□□□□ -1.73
TPK2	YPL203W	RPP2A	P05319	106 aa	Known RBP	4.21	□□□□□ -1.74
TPK2	YPL203W	PMI40	P29952	429 aa	Known RBP	4.21	□□□□□ -1.74
TPK2	YPL203W	RPC82	P32349	654 aa		4.21	□□□□□ -1.74
TPK2	YPL203W	AFR1	P33304	620 aa		4.21	□□□□□ -1.74
TPK2	YPL203W	YRO2	P38079	344 aa		4.21	□□□□□ -1.74
TPK2	YPL203W	ECM21	P38167	1117 aa	Known RBP	4.21	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 89.7 ms