RNA–Protein interactions for RNA: YNL278W

CAF120, Transcript of Part of the CCR4-NOT transcriptional regulatory complex, yeastyeast

Gene CAF120, Length 3,183 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF120YNL278W SEC21P32074 935 aaKnown RBP3□□□□□ -1.93
CAF120YNL278W RPC37P36121 282 aa3□□□□□ -1.93
CAF120YNL278W TIF4631P39935 952 aaKnown RBP3□□□□□ -1.93
CAF120YNL278W RPS26AP39938 119 aaKnown RBP3□□□□□ -1.93
CAF120YNL278W RPS26BP39939 119 aaKnown RBP3□□□□□ -1.93
CAF120YNL278W GPP1P41277 250 aaKnown RBP3□□□□□ -1.93
CAF120YNL278W HMI1Q12039 706 aa3□□□□□ -1.93
CAF120YNL278W TY3A-GQ12173 290 aa3□□□□□ -1.93
CAF120YNL278W TIP41Q12199 356 aa3□□□□□ -1.93
CAF120YNL278W NFI1Q12216 726 aa3□□□□□ -1.93
CAF120YNL278W TY3A-IQ99219 290 aa3□□□□□ -1.93
CAF120YNL278W RPL19AP0CX82 189 aaKnown RBP3□□□□□ -1.93
CAF120YNL278W RPL19BP0CX83 189 aaPredicted RBP3□□□□□ -1.93
CAF120YNL278W HOM3P10869 527 aa3□□□□□ -1.93
CAF120YNL278W APA1P16550 321 aaKnown RBP3□□□□□ -1.93
CAF120YNL278W CKI1P20485 582 aa3□□□□□ -1.93
CAF120YNL278W SPT5P27692 1063 aaKnown RBP3□□□□□ -1.93
CAF120YNL278W UGA4P32837 571 aa3□□□□□ -1.93
CAF120YNL278W ARC19P33204 171 aaKnown RBP3□□□□□ -1.93
CAF120YNL278W BCK2P33306 851 aa3□□□□□ -1.93
CAF120YNL278W ARL1P38116 183 aaKnown RBP3□□□□□ -1.93
CAF120YNL278W MAL33P38157 468 aa3□□□□□ -1.93
CAF120YNL278W RXT2P38255 430 aa3□□□□□ -1.93
CAF120YNL278W YAP1801P38856 637 aa3□□□□□ -1.93
CAF120YNL278W ICP55P40051 511 aa3□□□□□ -1.93
CAF120YNL278W CCM1P48237 864 aaPredicted RBP3□□□□□ -1.93
CAF120YNL278W RTC4P53850 401 aa3□□□□□ -1.93
CAF120YNL278W YNL034WP53963 612 aa3□□□□□ -1.93
CAF120YNL278W YNL018CP53976 612 aa3□□□□□ -1.93
CAF120YNL278W MSH6Q03834 1242 aa3□□□□□ -1.93
CAF120YNL278W SND1Q04007 877 aa3□□□□□ -1.93
CAF120YNL278W RRB1Q04225 511 aaKnown RBP3□□□□□ -1.93
CAF120YNL278W SLX4Q12098 748 aa3□□□□□ -1.93
CAF120YNL278W GIS3Q12418 502 aa3□□□□□ -1.93
CAF120YNL278W LSO1Q3E827 93 aa3□□□□□ -1.93
CAF120YNL278W MST1P07236 462 aa2.99□□□□□ -1.93
CAF120YNL278W PRX1P34227 261 aaKnown RBP2.99□□□□□ -1.93
CAF120YNL278W KDX1P36005 433 aa2.99□□□□□ -1.93
CAF120YNL278W MCX1P38323 520 aaPredicted RBP2.99□□□□□ -1.93
CAF120YNL278W APE4P38821 490 aa2.99□□□□□ -1.93
CAF120YNL278W CRP1P38845 465 aaKnown RBP2.99□□□□□ -1.93
CAF120YNL278W FAA4P47912 694 aaKnown RBP2.99□□□□□ -1.93
CAF120YNL278W ATG16Q03818 150 aa2.99□□□□□ -1.93
CAF120YNL278W DON1Q05610 365 aa2.99□□□□□ -1.93
CAF120YNL278W ATG13Q06628 738 aa2.99□□□□□ -1.93
CAF120YNL278W NUR1Q12066 484 aa2.99□□□□□ -1.93
CAF120YNL278W SEC18P18759 758 aaKnown RBP2.99□□□□□ -1.93
CAF120YNL278W ADE2P21264 571 aaKnown RBP2.99□□□□□ -1.93
CAF120YNL278W APN1P22936 367 aa2.99□□□□□ -1.93
CAF120YNL278W PUF4P25339 888 aaKnown RBP RIP-Chip data2.99□□□□□ -1.93not detected
CAF120YNL278W SYN8P31377 255 aa2.99□□□□□ -1.93
CAF120YNL278W JNM1P36224 373 aa2.99□□□□□ -1.93
CAF120YNL278W EXO84P38261 753 aa2.99□□□□□ -1.93
CAF120YNL278W SAF1P38352 637 aa2.99□□□□□ -1.93
CAF120YNL278W DOT6P40059 670 aaKnown RBP2.99□□□□□ -1.93
CAF120YNL278W SIP5P40210 489 aaKnown RBP2.99□□□□□ -1.93
CAF120YNL278W NCS2P53923 493 aaPredicted RBP2.99□□□□□ -1.93
CAF120YNL278W APC11Q12157 165 aa2.99□□□□□ -1.93
CAF120YNL278W APC2Q12440 853 aa2.99□□□□□ -1.93
CAF120YNL278W TMA17Q12513 150 aa2.99□□□□□ -1.93
CAF120YNL278W TOR1P35169 2470 aa2.99□□□□□ -1.93
CAF120YNL278W INH1P01097 85 aa2.98□□□□□ -1.93
CAF120YNL278W NAT1P12945 854 aaKnown RBP2.98□□□□□ -1.93
CAF120YNL278W HCA4P20448 770 aaKnown RBP2.98□□□□□ -1.93
CAF120YNL278W MGE1P38523 228 aa2.98□□□□□ -1.93
CAF120YNL278W UTP7P40055 554 aaKnown RBP2.98□□□□□ -1.93
CAF120YNL278W BTN2P53286 410 aa2.98□□□□□ -1.93
CAF120YNL278W COG6P53959 839 aa2.98□□□□□ -1.93
CAF120YNL278W RPS15Q01855 142 aaKnown RBP2.98□□□□□ -1.93
CAF120YNL278W ESC2Q06340 456 aa2.98□□□□□ -1.93
CAF120YNL278W YDL073WQ07454 984 aa2.98□□□□□ -1.93
CAF120YNL278W WRS1Q12109 432 aaKnown RBP2.98□□□□□ -1.93
CAF120YNL278W HXK1P04806 485 aaKnown RBP2.98□□□□□ -1.93
CAF120YNL278W SPS1P08458 490 aa2.98□□□□□ -1.93
CAF120YNL278W BIK1P11709 440 aa2.98□□□□□ -1.93
CAF120YNL278W SRP54P20424 541 aaKnown RBP2.98□□□□□ -1.93
CAF120YNL278W LCB1P25045 558 aaKnown RBP2.98□□□□□ -1.93
CAF120YNL278W MSH3P25336 1018 aa2.98□□□□□ -1.93
CAF120YNL278W MSH2P25847 964 aa2.98□□□□□ -1.93
CAF120YNL278W GSY2P27472 705 aa2.98□□□□□ -1.93
CAF120YNL278W MKK2P32491 506 aa2.98□□□□□ -1.93
CAF120YNL278W CNS1P33313 385 aa2.98□□□□□ -1.93
CAF120YNL278W SIC1P38634 284 aa2.98□□□□□ -1.93
CAF120YNL278W MEF2P39677 819 aa2.98□□□□□ -1.93
CAF120YNL278W SPF1P39986 1215 aaKnown RBP2.98□□□□□ -1.93
CAF120YNL278W HXT8P40886 569 aa2.98□□□□□ -1.93
CAF120YNL278W YKE2P52553 114 aa2.98□□□□□ -1.93
CAF120YNL278W ADE12P80210 433 aaKnown RBP2.98□□□□□ -1.93
CAF120YNL278W YLR413WQ06689 675 aa2.98□□□□□ -1.93
CAF120YNL278W ACK1Q07622 623 aaPredicted RBP2.98□□□□□ -1.93
CAF120YNL278W YOR389WQ08912 624 aa2.98□□□□□ -1.93
CAF120YNL278W YVC1Q12324 675 aa2.98□□□□□ -1.93
CAF120YNL278W PHO8P11491 566 aa2.98□□□□□ -1.93
CAF120YNL278W MER1P16523 270 aa2.98□□□□□ -1.93
CAF120YNL278W NPR1P22211 790 aa2.98□□□□□ -1.93
CAF120YNL278W PRP22P24384 1145 aaKnown RBP2.98□□□□□ -1.93
CAF120YNL278W ATG19P35193 415 aa2.98□□□□□ -1.93
CAF120YNL278W HSE1P38753 452 aa2.98□□□□□ -1.93
CAF120YNL278W HUL4P40985 892 aa2.98□□□□□ -1.93
CAF120YNL278W VTC2P43585 828 aa2.98□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 36.3 ms