RNA–Protein interactions for RNA: YMR129W

POM152, Transcript of Glycoprotein subunit of transmembrane ring of nuclear pore complex, yeast

Gene POM152, Length 4,014 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
POM152	YMR129W	QNS1	P38795	714 aa	Known RBP	3.2	□□□□□ -1.9
POM152	YMR129W	GIP2	P40036	548 aa		3.2	□□□□□ -1.9
POM152	YMR129W	SAP185	P40856	1058 aa		3.2	□□□□□ -1.9
POM152	YMR129W	SHR5	P41912	237 aa		3.2	□□□□□ -1.9
POM152	YMR129W	NHX1	Q04121	633 aa		3.2	□□□□□ -1.9
POM152	YMR129W	XYL2	Q07993	356 aa		3.2	□□□□□ -1.9
POM152	YMR129W	UGA2	P38067	497 aa		3.19	□□□□□ -1.9
POM152	YMR129W	RRP8	P38961	392 aa	Known RBP	3.19	□□□□□ -1.9
POM152	YMR129W	PBP1	P53297	722 aa	Known RBP	3.19	□□□□□ -1.9
POM152	YMR129W	NCE103	P53615	221 aa		3.19	□□□□□ -1.9
POM152	YMR129W	TY1A-DR2	Q03964	440 aa	Known RBP	3.19	□□□□□ -1.9
POM152	YMR129W	YLR257W	Q06146	321 aa	Known RBP	3.19	□□□□□ -1.9
POM152	YMR129W	RSC2	Q06488	889 aa		3.19	□□□□□ -1.9
POM152	YMR129W	HOM3	P10869	527 aa		3.19	□□□□□ -1.9
POM152	YMR129W	TAF1	P46677	1066 aa		3.19	□□□□□ -1.9
POM152	YMR129W	MNN11	P46985	422 aa	Known RBP	3.19	□□□□□ -1.9
POM152	YMR129W	BNA2	P47125	453 aa		3.19	□□□□□ -1.9
POM152	YMR129W	RSC1	P53236	928 aa		3.19	□□□□□ -1.9
POM152	YMR129W	YMR018W	Q04364	514 aa		3.19	□□□□□ -1.9
POM152	YMR129W	OPT2	Q06593	877 aa		3.19	□□□□□ -1.9
POM152	YMR129W	NEW1	Q08972	1196 aa	Known RBP	3.19	□□□□□ -1.9
POM152	YMR129W	FPS1	P23900	669 aa		3.19	□□□□□ -1.9
POM152	YMR129W	DPB3	P27344	201 aa		3.19	□□□□□ -1.9
POM152	YMR129W	EMC3	P36039	253 aa		3.19	□□□□□ -1.9
POM152	YMR129W	MNN4	P36044	1178 aa		3.19	□□□□□ -1.9
POM152	YMR129W	YIL092W	P40497	633 aa		3.19	□□□□□ -1.9
POM152	YMR129W	SBE2	P42223	864 aa	Known RBP	3.19	□□□□□ -1.9
POM152	YMR129W	IES1	P43579	692 aa		3.19	□□□□□ -1.9
POM152	YMR129W	NUP85	P46673	744 aa		3.19	□□□□□ -1.9
POM152	YMR129W	PCL10	P53124	433 aa		3.19	□□□□□ -1.9
POM152	YMR129W	DCS2	Q12123	353 aa		3.19	□□□□□ -1.9
POM152	YMR129W	ENT1	Q12518	454 aa		3.19	□□□□□ -1.9
POM152	YMR129W	PTH2	P34222	208 aa		3.18	□□□□□ -1.9
POM152	YMR129W	APL2	P36000	726 aa	Predicted RBP	3.18	□□□□□ -1.9
POM152	YMR129W	RPN10	P38886	268 aa	Known RBP	3.18	□□□□□ -1.9
POM152	YMR129W	SIT1	P39980	628 aa		3.18	□□□□□ -1.9
POM152	YMR129W	MEC3	Q02574	474 aa		3.18	□□□□□ -1.9
POM152	YMR129W	SRP1	Q02821	542 aa	Known RBP	3.18	□□□□□ -1.9
POM152	YMR129W	YIG1	Q08956	461 aa		3.18	□□□□□ -1.9
POM152	YMR129W	CWC2	Q12046	339 aa	Predicted RBP	3.18	□□□□□ -1.9
POM152	YMR129W	CCR4	P31384	837 aa	Known RBP	3.18	□□□□□ -1.9
POM152	YMR129W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	3.18	□□□□□ -1.9	not detected
POM152	YMR129W	CIA1	Q05583	330 aa		3.18	□□□□□ -1.9
POM152	YMR129W	RSA3	Q05942	220 aa	Known RBP	3.18	□□□□□ -1.9
POM152	YMR129W	AAC3	P18238	307 aa		3.18	□□□□□ -1.9
POM152	YMR129W	MSH1	P25846	959 aa		3.18	□□□□□ -1.9
POM152	YMR129W	SLA2	P33338	968 aa		3.18	□□□□□ -1.9
POM152	YMR129W	DUG1	P43616	481 aa	Known RBP	3.18	□□□□□ -1.9
POM152	YMR129W	ASM4	Q05166	528 aa		3.18	□□□□□ -1.9
POM152	YMR129W	RCL1	Q08096	367 aa	Predicted RBP	3.18	□□□□□ -1.9
POM152	YMR129W	RRP6	Q12149	733 aa	Known RBP	3.18	□□□□□ -1.9
POM152	YMR129W	YER158C	P40095	573 aa		3.17	□□□□□ -1.9
POM152	YMR129W	YFL052W	P43551	465 aa		3.17	□□□□□ -1.9
POM152	YMR129W	MAD3	P47074	515 aa		3.17	□□□□□ -1.9
POM152	YMR129W	CPR6	P53691	371 aa	Known RBP	3.17	□□□□□ -1.9
POM152	YMR129W	GUK1	P15454	187 aa	Known RBP	3.17	□□□□□ -1.9
POM152	YMR129W	ACA1	P39970	489 aa		3.17	□□□□□ -1.9
POM152	YMR129W	SLD3	P53135	668 aa		3.17	□□□□□ -1.9
POM152	YMR129W	CUZ1	P53899	274 aa		3.17	□□□□□ -1.9
POM152	YMR129W	EIS1	Q05050	843 aa	Known RBP	3.17	□□□□□ -1.9
POM152	YMR129W	RFA1	P22336	621 aa	Known RBP	3.17	□□□□□ -1.9
POM152	YMR129W	TIM10	P87108	93 aa		3.17	□□□□□ -1.9
POM152	YMR129W	EAR1	Q03212	550 aa		3.17	□□□□□ -1.9
POM152	YMR129W	PRC1	P00729	532 aa		3.16	□□□□□ -1.9
POM152	YMR129W	OPI1	P21957	404 aa		3.16	□□□□□ -1.9
POM152	YMR129W	OSH7	P38755	437 aa		3.16	□□□□□ -1.9
POM152	YMR129W	VTC4	P47075	721 aa		3.16	□□□□□ -1.9
POM152	YMR129W	ENV11	P53246	860 aa		3.16	□□□□□ -1.9
POM152	YMR129W	TEP1	P53916	434 aa		3.16	□□□□□ -1.9
POM152	YMR129W	TRS130	Q03660	1102 aa		3.16	□□□□□ -1.9
POM152	YMR129W	TPP1	Q03796	238 aa		3.16	□□□□□ -1.9
POM152	YMR129W	YLR149C	Q99296	730 aa		3.16	□□□□□ -1.9
POM152	YMR129W	KNS1	P32350	737 aa	Predicted RBP	3.16	□□□□□ -1.9
POM152	YMR129W	SCS2	P40075	244 aa	Known RBP	3.16	□□□□□ -1.9
POM152	YMR129W	NIT3	P49954	291 aa		3.16	□□□□□ -1.9
POM152	YMR129W	LEE1	Q02799	301 aa	Known RBP	3.16	□□□□□ -1.9
POM152	YMR129W	ATP25	Q03153	612 aa		3.16	□□□□□ -1.9
POM152	YMR129W	SKY1	Q03656	742 aa		3.16	□□□□□ -1.9
POM152	YMR129W	DOT1	Q04089	582 aa	Known RBP	3.16	□□□□□ -1.9
POM152	YMR129W	SSL1	Q04673	461 aa	Predicted RBP	3.16	□□□□□ -1.9
POM152	YMR129W	RPN7	Q06103	429 aa	Known RBP	3.16	□□□□□ -1.9
POM152	YMR129W	GAS5	Q08193	484 aa		3.16	□□□□□ -1.9
POM152	YMR129W	LAP2	Q10740	671 aa		3.16	□□□□□ -1.9
POM152	YMR129W	PHO81	P17442	1178 aa		3.16	□□□□□ -1.9
POM152	YMR129W	SWI4	P25302	1093 aa	Known RBP	3.16	□□□□□ -1.9
POM152	YMR129W	HXT4	P32467	576 aa		3.16	□□□□□ -1.9
POM152	YMR129W	GPT2	P36148	743 aa		3.16	□□□□□ -1.9
POM152	YMR129W	CCT5	P40413	562 aa	Known RBP	3.16	□□□□□ -1.9
POM152	YMR129W	ENT3	P47160	408 aa		3.16	□□□□□ -1.9
POM152	YMR129W	ASK10	P48361	1146 aa		3.16	□□□□□ -1.9
POM152	YMR129W	ELG1	Q12050	791 aa		3.16	□□□□□ -1.9
POM152	YMR129W	GFA1	P14742	717 aa	Known RBP	3.16	□□□□□ -1.9
POM152	YMR129W	CMP2	P14747	604 aa		3.16	□□□□□ -1.9
POM152	YMR129W	NAR1	P23503	491 aa	Known RBP	3.16	□□□□□ -1.9
POM152	YMR129W	OAF3	P36023	863 aa		3.16	□□□□□ -1.9
POM152	YMR129W	GIC1	P38785	314 aa		3.16	□□□□□ -1.9
POM152	YMR129W	YHR202W	P38887	602 aa		3.16	□□□□□ -1.9
POM152	YMR129W	DPH1	P40487	425 aa	Known RBP	3.16	□□□□□ -1.9
POM152	YMR129W	RLP7	P40693	322 aa	Known RBP	3.16	□□□□□ -1.9
POM152	YMR129W	RET2	P43621	546 aa		3.16	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 61.3 ms