RNA–Protein interactions for RNA: YML103C

NUP188, Transcript of Subunit of the inner ring of the nuclear pore complex (NPC), yeastyeast

Gene NUP188, Length 4,968 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP188YML103C MRP10O75012 95 aa1.54□□□□□ -2.16
NUP188YML103C VBA3P25594 458 aa1.54□□□□□ -2.16
NUP188YML103C SEC6P32844 805 aa1.54□□□□□ -2.16
NUP188YML103C MFT1P33441 392 aaKnown RBP1.54□□□□□ -2.16
NUP188YML103C RFC5P38251 354 aa1.54□□□□□ -2.16
NUP188YML103C RLP7P40693 322 aaKnown RBP1.54□□□□□ -2.16
NUP188YML103C HRQ1Q05549 1077 aa1.54□□□□□ -2.16
NUP188YML103C YPR196WQ06595 470 aa1.54□□□□□ -2.16
NUP188YML103C ALG6Q12001 544 aaKnown RBP1.54□□□□□ -2.16
NUP188YML103C URA1P28272 314 aaPredicted RBP1.54□□□□□ -2.16
NUP188YML103C MRS6P32864 603 aaKnown RBP1.54□□□□□ -2.16
NUP188YML103C TYS1P36421 394 aaKnown RBP1.54□□□□□ -2.16
NUP188YML103C TDA3P38758 523 aa1.54□□□□□ -2.16
NUP188YML103C CCT5P40413 562 aaKnown RBP1.54□□□□□ -2.16
NUP188YML103C MTQ2Q03920 221 aaPredicted RBP1.54□□□□□ -2.16
NUP188YML103C RSC3Q06639 885 aa1.54□□□□□ -2.16
NUP188YML103C SLX4Q12098 748 aa1.54□□□□□ -2.16
NUP188YML103C SVS1Q12254 260 aa1.54□□□□□ -2.16
NUP188YML103C YVC1Q12324 675 aa1.54□□□□□ -2.16
NUP188YML103C YPR071WQ12346 211 aa1.54□□□□□ -2.16
NUP188YML103C ADP1P25371 1049 aa1.54□□□□□ -2.16
NUP188YML103C PTP2P29461 750 aa1.54□□□□□ -2.16
NUP188YML103C TYE7P33122 291 aaPredicted RBP1.54□□□□□ -2.16
NUP188YML103C YFL052WP43551 465 aa1.54□□□□□ -2.16
NUP188YML103C YGR153WP48238 217 aa1.54□□□□□ -2.16
NUP188YML103C PEX14P53112 341 aa1.54□□□□□ -2.16
NUP188YML103C PEX8P53248 589 aa1.54□□□□□ -2.16
NUP188YML103C ALO1P54783 526 aaKnown RBP1.54□□□□□ -2.16
NUP188YML103C NYV1Q12255 253 aa1.54□□□□□ -2.16
NUP188YML103C KCS1Q12494 1050 aa1.54□□□□□ -2.16
NUP188YML103C ATG11Q12527 1178 aa1.54□□□□□ -2.16
NUP188YML103C CDC9P04819 755 aa1.54□□□□□ -2.16
NUP188YML103C SFL1P20134 766 aa1.54□□□□□ -2.16
NUP188YML103C KAE1P36132 386 aa1.54□□□□□ -2.16
NUP188YML103C ECM21P38167 1117 aaKnown RBP1.54□□□□□ -2.16
NUP188YML103C SHR5P41912 237 aa1.54□□□□□ -2.16
NUP188YML103C SBE2P42223 864 aaKnown RBP1.54□□□□□ -2.16
NUP188YML103C NIT2P47016 307 aa1.54□□□□□ -2.16
NUP188YML103C YOL057WQ08225 711 aa1.54□□□□□ -2.16
NUP188YML103C BI4P03879 638 aa1.53□□□□□ -2.16
NUP188YML103C SSD1P24276 1250 aaKnown RBP RIP-Chip data1.53□□□□□ -2.16not detected
NUP188YML103C PCL2P25693 308 aa1.53□□□□□ -2.16
NUP188YML103C STE13P33894 931 aa1.53□□□□□ -2.16
NUP188YML103C TAT1P38085 619 aa1.53□□□□□ -2.16
NUP188YML103C VPS27P40343 622 aaKnown RBP1.53□□□□□ -2.16
NUP188YML103C DAS1P47005 663 aa1.53□□□□□ -2.16
NUP188YML103C MET13P53128 600 aa1.53□□□□□ -2.16
NUP188YML103C ORC4P54791 529 aa1.53□□□□□ -2.16
NUP188YML103C SRC1Q03707 834 aa1.53□□□□□ -2.16
NUP188YML103C PHM6Q05637 104 aa1.53□□□□□ -2.16
NUP188YML103C TRE1Q08919 783 aa1.53□□□□□ -2.16
NUP188YML103C YPR053CQ6Q5F3 151 aa1.53□□□□□ -2.16
NUP188YML103C NOT3P06102 836 aaKnown RBP1.53□□□□□ -2.16
NUP188YML103C SAM35P14693 329 aa1.53□□□□□ -2.16
NUP188YML103C PRP19P32523 503 aaKnown RBP1.53□□□□□ -2.16
NUP188YML103C PGM1P33401 570 aaKnown RBP1.53□□□□□ -2.16
NUP188YML103C YRB30P53107 440 aaPredicted RBP1.53□□□□□ -2.16
NUP188YML103C NPY1P53164 384 aa1.53□□□□□ -2.16
NUP188YML103C SNO2P53823 222 aa1.53□□□□□ -2.16
NUP188YML103C COG6P53959 839 aa1.53□□□□□ -2.16
NUP188YML103C YKR011CQ02209 353 aa1.53□□□□□ -2.16
NUP188YML103C NSE5Q03718 556 aa1.53□□□□□ -2.16
NUP188YML103C ATG16Q03818 150 aa1.53□□□□□ -2.16
NUP188YML103C ATG33Q06485 197 aa1.53□□□□□ -2.16
NUP188YML103C TUF1P02992 437 aaKnown RBP1.53□□□□□ -2.16
NUP188YML103C CHS2P14180 963 aa1.53□□□□□ -2.16
NUP188YML103C PRP22P24384 1145 aaKnown RBP1.53□□□□□ -2.16
NUP188YML103C MEF1P25039 761 aa1.53□□□□□ -2.16
NUP188YML103C TRK2P28584 889 aa1.53□□□□□ -2.16
NUP188YML103C NAM7P30771 971 aaKnown RBP1.53□□□□□ -2.16
NUP188YML103C CYS3P31373 394 aaKnown RBP1.53□□□□□ -2.16
NUP188YML103C MCD4P36051 919 aa1.53□□□□□ -2.16
NUP188YML103C SAP190P36123 1033 aa1.53□□□□□ -2.16
NUP188YML103C YBR284WP38150 797 aa1.53□□□□□ -2.16
NUP188YML103C YLF2P38746 405 aa1.53□□□□□ -2.16
NUP188YML103C CTF8P38877 133 aa1.53□□□□□ -2.16
NUP188YML103C CCT3P39077 534 aaKnown RBP1.53□□□□□ -2.16
NUP188YML103C GPB2P39717 880 aa1.53□□□□□ -2.16
NUP188YML103C SAW1P39735 261 aa1.53□□□□□ -2.16
NUP188YML103C CNM67P53865 581 aaKnown RBP1.53□□□□□ -2.16
NUP188YML103C PUF3Q07807 879 aaKnown RBP RIP-Chip data1.53□□□□□ -2.16not detected
NUP188YML103C HFI1Q12060 488 aa1.53□□□□□ -2.16
NUP188YML103C PSF3Q12146 194 aa1.53□□□□□ -2.16
NUP188YML103C RAD18P10862 487 aa1.52□□□□□ -2.17
NUP188YML103C SST2P11972 698 aaKnown RBP1.52□□□□□ -2.17
NUP188YML103C APL1P27351 700 aa1.52□□□□□ -2.17
NUP188YML103C EUG1P32474 517 aa1.52□□□□□ -2.17
NUP188YML103C YKR018CP36114 725 aa1.52□□□□□ -2.17
NUP188YML103C PPE1P38796 400 aa1.52□□□□□ -2.17
NUP188YML103C OAF1P39720 1047 aaPredicted RBP1.52□□□□□ -2.17
NUP188YML103C NIT1P40447 199 aa1.52□□□□□ -2.17
NUP188YML103C HFM1P51979 1187 aa1.52□□□□□ -2.17
NUP188YML103C YBP2P53169 641 aa1.52□□□□□ -2.17
NUP188YML103C HPF1Q05164 967 aa1.52□□□□□ -2.17
NUP188YML103C TOP3P13099 656 aa1.52□□□□□ -2.17
NUP188YML103C CCR4P31384 837 aaKnown RBP1.52□□□□□ -2.17
NUP188YML103C NIC96P34077 839 aa1.52□□□□□ -2.17
NUP188YML103C APN2P38207 520 aa1.52□□□□□ -2.17
NUP188YML103C MXR1P40029 184 aa1.52□□□□□ -2.17
NUP188YML103C GPP1P41277 250 aaKnown RBP1.52□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 25.7 ms