RNA–Protein interactions for RNA: YLR455W

PDP3, Transcript of Component of the NuA3b histone acetyltransferase complex, yeastyeast

Gene PDP3, Length 915 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDP3YLR455W BET3P36149 193 aa4.03□□□□□ -1.76
PDP3YLR455W URM1P40554 99 aaPredicted RBP4.03□□□□□ -1.76
PDP3YLR455W RTA1P53047 317 aa4.03□□□□□ -1.76
PDP3YLR455W ORC1P54784 914 aaPredicted RBP4.03□□□□□ -1.76
PDP3YLR455W URN1Q06525 465 aaKnown RBP4.03□□□□□ -1.76
PDP3YLR455W YPR071WQ12346 211 aa4.03□□□□□ -1.76
PDP3YLR455W TOP3P13099 656 aa4.02□□□□□ -1.77
PDP3YLR455W SRP101P32916 621 aa4.02□□□□□ -1.77
PDP3YLR455W YKL091CP33324 310 aaKnown RBP4.02□□□□□ -1.77
PDP3YLR455W YBR284WP38150 797 aa4.02□□□□□ -1.77
PDP3YLR455W PBP2P38151 413 aaKnown RBP RIP-Chip data4.02□□□□□ -1.77not detected
PDP3YLR455W AIM21P40563 679 aa4.02□□□□□ -1.77
PDP3YLR455W SLI1P53304 468 aa4.02□□□□□ -1.77
PDP3YLR455W SPE1P08432 466 aa4.01□□□□□ -1.77
PDP3YLR455W STE13P33894 931 aa4.01□□□□□ -1.77
PDP3YLR455W DEF1P35732 738 aaKnown RBP4.01□□□□□ -1.77
PDP3YLR455W OSW7P43611 510 aa4.01□□□□□ -1.77
PDP3YLR455W PSP2P50109 593 aaKnown RBP4.01□□□□□ -1.77
PDP3YLR455W RAI1P53063 387 aaKnown RBP4.01□□□□□ -1.77
PDP3YLR455W YGR283CP53336 341 aaPredicted RBP4.01□□□□□ -1.77
PDP3YLR455W ENV7Q12003 364 aa4.01□□□□□ -1.77
PDP3YLR455W NOT3P06102 836 aaKnown RBP4□□□□□ -1.77
PDP3YLR455W CIT2P08679 460 aa4□□□□□ -1.77
PDP3YLR455W EMC3P36039 253 aa4□□□□□ -1.77
PDP3YLR455W EXG2P52911 562 aa4□□□□□ -1.77
PDP3YLR455W DAM1P53267 343 aa4□□□□□ -1.77
PDP3YLR455W HDA1P53973 706 aa4□□□□□ -1.77
PDP3YLR455W YPR196WQ06595 470 aa4□□□□□ -1.77
PDP3YLR455W KCS1Q12494 1050 aa4□□□□□ -1.77
PDP3YLR455W MPH2P0CD99 609 aa3.99□□□□□ -1.77
PDP3YLR455W ERT1P38140 529 aa3.99□□□□□ -1.77
PDP3YLR455W MSS4P38994 779 aa3.99□□□□□ -1.77
PDP3YLR455W GDH3P39708 457 aa3.99□□□□□ -1.77
PDP3YLR455W NUP82P40368 713 aa3.99□□□□□ -1.77
PDP3YLR455W NCS6P53088 359 aa3.99□□□□□ -1.77
PDP3YLR455W KIN4Q01919 800 aa3.99□□□□□ -1.77
PDP3YLR455W ATP25Q03153 612 aa3.99□□□□□ -1.77
PDP3YLR455W PFK1P16861 987 aaKnown RBP3.98□□□□□ -1.77
PDP3YLR455W STE14P32584 239 aa3.98□□□□□ -1.77
PDP3YLR455W ALG2P43636 503 aa3.98□□□□□ -1.77
PDP3YLR455W MAL11P53048 616 aa3.98□□□□□ -1.77
PDP3YLR455W CTF4Q01454 927 aa3.98□□□□□ -1.77
PDP3YLR455W VPS30Q02948 557 aa3.98□□□□□ -1.77
PDP3YLR455W GUP2Q08929 609 aa3.98□□□□□ -1.77
PDP3YLR455W UPC2Q12151 913 aa3.98□□□□□ -1.77
PDP3YLR455W NPC2Q12408 173 aa3.98□□□□□ -1.77
PDP3YLR455W TOM70P07213 617 aaKnown RBP3.97□□□□□ -1.77
PDP3YLR455W RRP14P36080 434 aaKnown RBP3.97□□□□□ -1.77
PDP3YLR455W CHS7P38843 316 aa3.97□□□□□ -1.77
PDP3YLR455W NIT3P49954 291 aa3.97□□□□□ -1.77
PDP3YLR455W NOG2P53742 486 aaKnown RBP3.97□□□□□ -1.77
PDP3YLR455W YKR011CQ02209 353 aa3.97□□□□□ -1.77
PDP3YLR455W YLR125WQ12138 136 aa3.97□□□□□ -1.77
PDP3YLR455W ERR1P0CX10 437 aa3.96□□□□□ -1.78
PDP3YLR455W ERR2P0CX11 437 aa3.96□□□□□ -1.78
PDP3YLR455W PHO8P11491 566 aa3.96□□□□□ -1.78
PDP3YLR455W RFA1P22336 621 aaKnown RBP3.96□□□□□ -1.78
PDP3YLR455W MSH2P25847 964 aa3.96□□□□□ -1.78
PDP3YLR455W URA1P28272 314 aaPredicted RBP3.96□□□□□ -1.78
PDP3YLR455W HRR25P29295 494 aaKnown RBP3.96□□□□□ -1.78
PDP3YLR455W TIM23P32897 222 aa3.96□□□□□ -1.78
PDP3YLR455W TYE7P33122 291 aaPredicted RBP3.96□□□□□ -1.78
PDP3YLR455W SPC29P33419 253 aa3.96□□□□□ -1.78
PDP3YLR455W NMD2P38798 1089 aaKnown RBP3.96□□□□□ -1.78
PDP3YLR455W CTF8P38877 133 aa3.96□□□□□ -1.78
PDP3YLR455W GYP8P43570 497 aa3.96□□□□□ -1.78
PDP3YLR455W JSN1P47135 1091 aaKnown RBP RIP-Chip data3.96□□□□□ -1.78not detected
PDP3YLR455W GIS1Q03833 894 aa3.96□□□□□ -1.78
PDP3YLR455W REH1Q06709 432 aa3.96□□□□□ -1.78
PDP3YLR455W WHI4Q07655 649 aaKnown RBP3.96□□□□□ -1.78
PDP3YLR455W AIM39Q08223 395 aa3.96□□□□□ -1.78
PDP3YLR455W MDM12Q92328 271 aa3.96□□□□□ -1.78
PDP3YLR455W TAD3Q9URQ3 322 aa3.96□□□□□ -1.78
PDP3YLR455W SDP1P40479 209 aa3.95□□□□□ -1.78
PDP3YLR455W TY4A-JP47023 414 aa3.95□□□□□ -1.78
PDP3YLR455W UGO1Q03327 502 aa3.95□□□□□ -1.78
PDP3YLR455W SSL1Q04673 461 aaPredicted RBP3.95□□□□□ -1.78
PDP3YLR455W ENB1Q08299 606 aa3.95□□□□□ -1.78
PDP3YLR455W RAD53P22216 821 aa3.94□□□□□ -1.78
PDP3YLR455W KAR4P25583 335 aa3.94□□□□□ -1.78
PDP3YLR455W HSV2P50079 448 aaPredicted RBP3.94□□□□□ -1.78
PDP3YLR455W YDR514CQ04408 483 aa3.94□□□□□ -1.78
PDP3YLR455W LAS17Q12446 633 aa3.94□□□□□ -1.78
PDP3YLR455W PHR1P05066 565 aaKnown RBP RIP-Chip data3.93□□□□□ -1.78not detected
PDP3YLR455W SED4P25365 1065 aa3.93□□□□□ -1.78
PDP3YLR455W MTC2P34246 357 aa3.93□□□□□ -1.78
PDP3YLR455W YIL108WP40483 696 aaKnown RBP3.93□□□□□ -1.78
PDP3YLR455W CEP3P40969 608 aa3.93□□□□□ -1.78
PDP3YLR455W HXT16P47185 567 aa3.93□□□□□ -1.78
PDP3YLR455W RNH70P53331 553 aa3.93□□□□□ -1.78
PDP3YLR455W MET7Q08645 548 aa3.93□□□□□ -1.78
PDP3YLR455W THI21Q08975 551 aa3.93□□□□□ -1.78
PDP3YLR455W DAL7P21826 554 aa3.92□□□□□ -1.78
PDP3YLR455W CAD1P24813 409 aaKnown RBP3.92□□□□□ -1.78
PDP3YLR455W CYS3P31373 394 aaKnown RBP3.92□□□□□ -1.78
PDP3YLR455W RPD3P32561 433 aa3.92□□□□□ -1.78
PDP3YLR455W TAD1P53065 400 aa3.92□□□□□ -1.78
PDP3YLR455W SLU7Q02775 382 aaKnown RBP3.92□□□□□ -1.78
PDP3YLR455W POB3Q04636 552 aaKnown RBP3.92□□□□□ -1.78
PDP3YLR455W RPS9AO13516 197 aaKnown RBP3.91□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 8.5 ms