RNA–Protein interactions for RNA: YLR301W

HRI1, Transcript of Protein of unknown function that interacts with Sec72p and Hrr25p, yeast

Gene HRI1, Length 735 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HRI1	YLR301W	RPD3	P32561	433 aa		4.17	□□□□□ -1.74
HRI1	YLR301W	YRO2	P38079	344 aa		4.17	□□□□□ -1.74
HRI1	YLR301W	PBY1	P38254	753 aa		4.17	□□□□□ -1.74
HRI1	YLR301W	MUK1	Q02866	612 aa		4.17	□□□□□ -1.74
HRI1	YLR301W	CTF13	P35203	478 aa		4.16	□□□□□ -1.74
HRI1	YLR301W	CTF8	P38877	133 aa		4.16	□□□□□ -1.74
HRI1	YLR301W	ATF1	P40353	525 aa		4.16	□□□□□ -1.74
HRI1	YLR301W	YIL108W	P40483	696 aa	Known RBP	4.16	□□□□□ -1.74
HRI1	YLR301W	NOP7	P53261	605 aa	Known RBP	4.16	□□□□□ -1.74
HRI1	YLR301W	TUB3	P09734	445 aa	Known RBP	4.15	□□□□□ -1.75
HRI1	YLR301W	MTH1	P35198	433 aa		4.15	□□□□□ -1.75
HRI1	YLR301W	CCM1	P48237	864 aa	Predicted RBP	4.15	□□□□□ -1.75
HRI1	YLR301W	TPO2	P53283	614 aa		4.15	□□□□□ -1.75
HRI1	YLR301W	GND2	P53319	492 aa		4.15	□□□□□ -1.75
HRI1	YLR301W	SWM1	Q12379	170 aa		4.15	□□□□□ -1.75
HRI1	YLR301W	TRM11	Q12463	433 aa		4.15	□□□□□ -1.75
HRI1	YLR301W	RFA1	P22336	621 aa	Known RBP	4.14	□□□□□ -1.75
HRI1	YLR301W	TYE7	P33122	291 aa	Predicted RBP	4.14	□□□□□ -1.75
HRI1	YLR301W	IRR1	P40541	1150 aa		4.14	□□□□□ -1.75
HRI1	YLR301W	HDA1	P53973	706 aa		4.14	□□□□□ -1.75
HRI1	YLR301W	BUL2	Q03758	920 aa	Known RBP	4.14	□□□□□ -1.75
HRI1	YLR301W	FRE5	Q08908	694 aa		4.14	□□□□□ -1.75
HRI1	YLR301W	MET3	P08536	511 aa		4.13	□□□□□ -1.75
HRI1	YLR301W	SPC42	P36094	363 aa		4.13	□□□□□ -1.75
HRI1	YLR301W	ERT1	P38140	529 aa		4.13	□□□□□ -1.75
HRI1	YLR301W	PPS1	P38148	807 aa		4.13	□□□□□ -1.75
HRI1	YLR301W	YKR011C	Q02209	353 aa		4.13	□□□□□ -1.75
HRI1	YLR301W	DLT1	Q04216	342 aa		4.13	□□□□□ -1.75
HRI1	YLR301W	LCD1	Q04377	747 aa		4.13	□□□□□ -1.75
HRI1	YLR301W	HBS1	P32769	611 aa	Known RBP	4.12	□□□□□ -1.75
HRI1	YLR301W	STE5	P32917	917 aa		4.12	□□□□□ -1.75
HRI1	YLR301W	TOK1	P40310	691 aa		4.12	□□□□□ -1.75
HRI1	YLR301W	ELO3	P40319	345 aa		4.12	□□□□□ -1.75
HRI1	YLR301W	CEP3	P40969	608 aa		4.12	□□□□□ -1.75
HRI1	YLR301W	ALD6	P54115	500 aa	Known RBP	4.12	□□□□□ -1.75
HRI1	YLR301W	BDF2	Q07442	638 aa		4.12	□□□□□ -1.75
HRI1	YLR301W	HBT1	Q07653	1046 aa	Known RBP	4.12	□□□□□ -1.75
HRI1	YLR301W	CUE2	P36075	443 aa	Known RBP	4.11	□□□□□ -1.75
HRI1	YLR301W	SPF1	P39986	1215 aa	Known RBP	4.11	□□□□□ -1.75
HRI1	YLR301W	SDS3	P40505	327 aa		4.11	□□□□□ -1.75
HRI1	YLR301W	DAS1	P47005	663 aa		4.11	□□□□□ -1.75
HRI1	YLR301W	ADY4	Q05955	493 aa		4.11	□□□□□ -1.75
HRI1	YLR301W	CAF20	P12962	161 aa	Known RBP	4.1	□□□□□ -1.75
HRI1	YLR301W	PRP9	P19736	530 aa	Known RBP	4.1	□□□□□ -1.75
HRI1	YLR301W	URA1	P28272	314 aa	Predicted RBP	4.1	□□□□□ -1.75
HRI1	YLR301W	REC104	P33323	182 aa		4.1	□□□□□ -1.75
HRI1	YLR301W	YHL017W	P38745	532 aa		4.1	□□□□□ -1.75
HRI1	YLR301W	YHR078W	P38799	552 aa		4.1	□□□□□ -1.75
HRI1	YLR301W	VAC8	P39968	578 aa		4.1	□□□□□ -1.75
HRI1	YLR301W	FKH2	P41813	862 aa		4.1	□□□□□ -1.75
HRI1	YLR301W	LGE1	Q02796	332 aa	Known RBP	4.1	□□□□□ -1.75
HRI1	YLR301W	PRP4	P20053	465 aa	Known RBP	4.09	□□□□□ -1.75
HRI1	YLR301W	YBR184W	P38299	523 aa		4.09	□□□□□ -1.75
HRI1	YLR301W	RPP1	P38786	293 aa		4.09	□□□□□ -1.75
HRI1	YLR301W	MUP1	P50276	574 aa		4.09	□□□□□ -1.75
HRI1	YLR301W	TDA5	Q06417	326 aa	Known RBP	4.09	□□□□□ -1.75
HRI1	YLR301W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
HRI1	YLR301W	RPS9A	O13516	197 aa	Known RBP	4.08	□□□□□ -1.76
HRI1	YLR301W	SCT1	P32784	759 aa		4.08	□□□□□ -1.76
HRI1	YLR301W	PFD1	P46988	109 aa		4.08	□□□□□ -1.76
HRI1	YLR301W	MRPS35	P53292	345 aa		4.08	□□□□□ -1.76
HRI1	YLR301W	MRH1	Q12117	320 aa	Predicted RBP	4.08	□□□□□ -1.76
HRI1	YLR301W	YPR071W	Q12346	211 aa		4.08	□□□□□ -1.76
HRI1	YLR301W	CDC11	P32458	415 aa		4.07	□□□□□ -1.76
HRI1	YLR301W	VHR1	P40522	640 aa		4.07	□□□□□ -1.76
HRI1	YLR301W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
HRI1	YLR301W	ASI2	P53895	289 aa		4.07	□□□□□ -1.76
HRI1	YLR301W	MPH2	P0CD99	609 aa		4.06	□□□□□ -1.76
HRI1	YLR301W	YBR284W	P38150	797 aa		4.06	□□□□□ -1.76
HRI1	YLR301W	ALR2	P43553	858 aa		4.06	□□□□□ -1.76
HRI1	YLR301W	PUS2	P53167	370 aa		4.06	□□□□□ -1.76
HRI1	YLR301W	FMP25	Q08023	583 aa		4.06	□□□□□ -1.76
HRI1	YLR301W	SSF2	Q12153	453 aa	Predicted RBP	4.06	□□□□□ -1.76
HRI1	YLR301W	NDJ1	Q12366	352 aa		4.06	□□□□□ -1.76
HRI1	YLR301W	YBR053C	P38235	358 aa		4.05	□□□□□ -1.76
HRI1	YLR301W	AMA1	P50082	593 aa		4.05	□□□□□ -1.76
HRI1	YLR301W	UTP8	P53276	713 aa	Known RBP	4.05	□□□□□ -1.76
HRI1	YLR301W	DUS1	P53759	423 aa	Known RBP	4.05	□□□□□ -1.76
HRI1	YLR301W	ENV7	Q12003	364 aa		4.05	□□□□□ -1.76
HRI1	YLR301W	SUT2	Q12286	268 aa		4.05	□□□□□ -1.76
HRI1	YLR301W	CYS3	P31373	394 aa	Known RBP	4.04	□□□□□ -1.76
HRI1	YLR301W	PET10	P36139	283 aa		4.04	□□□□□ -1.76
HRI1	YLR301W	YJL163C	P46996	555 aa		4.04	□□□□□ -1.76
HRI1	YLR301W	PKH1	Q03407	766 aa		4.04	□□□□□ -1.76
HRI1	YLR301W	CRR1	Q05790	422 aa		4.04	□□□□□ -1.76
HRI1	YLR301W	HAL9	Q12180	1030 aa		4.04	□□□□□ -1.76
HRI1	YLR301W	NGG1	P32494	702 aa		4.03	□□□□□ -1.76
HRI1	YLR301W	PZF1	P39933	429 aa		4.03	□□□□□ -1.76
HRI1	YLR301W	NOG2	P53742	486 aa	Known RBP	4.03	□□□□□ -1.76
HRI1	YLR301W	MUS81	Q04149	632 aa	Predicted RBP	4.03	□□□□□ -1.76
HRI1	YLR301W	HBN1	Q96VH4	193 aa		4.03	□□□□□ -1.76
HRI1	YLR301W	GFA1	P14742	717 aa	Known RBP	4.02	□□□□□ -1.77
HRI1	YLR301W	MSD1	P15179	658 aa	Known RBP	4.02	□□□□□ -1.77
HRI1	YLR301W	TDP1	P38319	544 aa		4.02	□□□□□ -1.77
HRI1	YLR301W	OCA5	P38738	679 aa		4.02	□□□□□ -1.77
HRI1	YLR301W	PCL5	P38794	229 aa		4.02	□□□□□ -1.77
HRI1	YLR301W	SNM1	P40993	198 aa		4.02	□□□□□ -1.77
HRI1	YLR301W	RIA1	P53893	1110 aa		4.02	□□□□□ -1.77
HRI1	YLR301W	YLR415C	O13578	112 aa		4.01	□□□□□ -1.77
HRI1	YLR301W	GRX1	P25373	110 aa	Known RBP	4.01	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms