RNA–Protein interactions for RNA: YLR086W

SMC4, Transcript of Subunit of the condensin complex, yeastyeast

Gene SMC4, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMC4YLR086W GPR1Q12361 961 aa1.78□□□□□ -2.12
SMC4YLR086W CDC6P09119 513 aa1.78□□□□□ -2.12
SMC4YLR086W SFL1P20134 766 aa1.78□□□□□ -2.12
SMC4YLR086W KAE1P36132 386 aa1.78□□□□□ -2.12
SMC4YLR086W HSL7P38274 827 aa1.78□□□□□ -2.12
SMC4YLR086W GPB2P39717 880 aa1.78□□□□□ -2.12
SMC4YLR086W RET2P43621 546 aa1.78□□□□□ -2.12
SMC4YLR086W YNR014WP53719 212 aa1.78□□□□□ -2.12
SMC4YLR086W YNR063WP53749 607 aa1.78□□□□□ -2.12
SMC4YLR086W YMR187CQ03236 431 aa1.78□□□□□ -2.12
SMC4YLR086W YDR132CQ03900 495 aa1.78□□□□□ -2.12
SMC4YLR086W HMO1Q03973 246 aaKnown RBP1.78□□□□□ -2.12
SMC4YLR086W NHX1Q04121 633 aa1.78□□□□□ -2.12
SMC4YLR086W OSW2Q12202 724 aa1.78□□□□□ -2.12
SMC4YLR086W SVS1Q12254 260 aa1.78□□□□□ -2.12
SMC4YLR086W GIN4Q12263 1142 aa1.78□□□□□ -2.12
SMC4YLR086W YPR071WQ12346 211 aa1.78□□□□□ -2.12
SMC4YLR086W NSI1Q12457 570 aa1.78□□□□□ -2.12
SMC4YLR086W ADR1P07248 1323 aa1.78□□□□□ -2.12
SMC4YLR086W CHS2P14180 963 aa1.78□□□□□ -2.12
SMC4YLR086W SSD1P24276 1250 aaKnown RBP RIP-Chip data1.78□□□□□ -2.12not detected
SMC4YLR086W VBA3P25594 458 aa1.78□□□□□ -2.12
SMC4YLR086W URA1P28272 314 aaPredicted RBP1.78□□□□□ -2.12
SMC4YLR086W VPS24P36095 224 aaKnown RBP1.78□□□□□ -2.12
SMC4YLR086W GPP2P40106 250 aaKnown RBP1.78□□□□□ -2.12
SMC4YLR086W RLP7P40693 322 aaKnown RBP1.78□□□□□ -2.12
SMC4YLR086W TGL2P54857 326 aa1.78□□□□□ -2.12
SMC4YLR086W YKR011CQ02209 353 aa1.78□□□□□ -2.12
SMC4YLR086W CEF1Q03654 590 aaPredicted RBP1.78□□□□□ -2.12
SMC4YLR086W RRP6Q12149 733 aaKnown RBP1.78□□□□□ -2.12
SMC4YLR086W ADP1P25371 1049 aa1.77□□□□□ -2.13
SMC4YLR086W PRP45P28004 379 aaPredicted RBP1.77□□□□□ -2.13
SMC4YLR086W EUG1P32474 517 aa1.77□□□□□ -2.13
SMC4YLR086W PUB1P32588 453 aaKnown RBP RIP-Chip data1.77□□□□□ -2.13not detected
SMC4YLR086W BEM4P39011 633 aa1.77□□□□□ -2.13
SMC4YLR086W YEN1P40028 759 aa1.77□□□□□ -2.13
SMC4YLR086W SDP1P40479 209 aa1.77□□□□□ -2.13
SMC4YLR086W MND2P40577 368 aa1.77□□□□□ -2.13
SMC4YLR086W RAI1P53063 387 aaKnown RBP1.77□□□□□ -2.13
SMC4YLR086W GAS5Q08193 484 aa1.77□□□□□ -2.13
SMC4YLR086W TMA7Q3E764 64 aaKnown RBP1.77□□□□□ -2.13
SMC4YLR086W SPS1P08458 490 aa1.77□□□□□ -2.13
SMC4YLR086W DPB3P27344 201 aa1.77□□□□□ -2.13
SMC4YLR086W MAL31P38156 614 aa1.77□□□□□ -2.13
SMC4YLR086W MIP6P38760 659 aaKnown RBP1.77□□□□□ -2.13
SMC4YLR086W SSP120P39931 234 aaKnown RBP1.77□□□□□ -2.13
SMC4YLR086W HLJ1P48353 224 aa1.77□□□□□ -2.13
SMC4YLR086W VPS62P53285 467 aa1.77□□□□□ -2.13
SMC4YLR086W SDH1Q00711 640 aa1.77□□□□□ -2.13
SMC4YLR086W ACO1P19414 778 aaKnown RBP RIP-Chip data1.77□□□□□ -2.13not detected
SMC4YLR086W TYE7P33122 291 aaPredicted RBP1.77□□□□□ -2.13
SMC4YLR086W YBR284WP38150 797 aa1.77□□□□□ -2.13
SMC4YLR086W OAF1P39720 1047 aaPredicted RBP1.77□□□□□ -2.13
SMC4YLR086W YFL054CP43549 646 aa1.77□□□□□ -2.13
SMC4YLR086W CCT8P47079 568 aaKnown RBP1.77□□□□□ -2.13
SMC4YLR086W ZIP2P53061 704 aa1.77□□□□□ -2.13
SMC4YLR086W DUS4Q06063 367 aa1.77□□□□□ -2.13
SMC4YLR086W TYS1P36421 394 aaKnown RBP1.77□□□□□ -2.13
SMC4YLR086W HXT6P39003 570 aaKnown RBP1.77□□□□□ -2.13
SMC4YLR086W HXT7P39004 570 aa1.77□□□□□ -2.13
SMC4YLR086W IES5P40060 125 aa1.77□□□□□ -2.13
SMC4YLR086W SDA1P53313 767 aaKnown RBP1.77□□□□□ -2.13
SMC4YLR086W NSG2P53898 299 aa1.77□□□□□ -2.13
SMC4YLR086W RSM24Q03976 319 aa1.77□□□□□ -2.13
SMC4YLR086W RSB1Q08417 382 aa1.77□□□□□ -2.13
SMC4YLR086W THI72Q08579 599 aa1.77□□□□□ -2.13
SMC4YLR086W TRE2Q08693 809 aa1.77□□□□□ -2.13
SMC4YLR086W UPC2Q12151 913 aa1.77□□□□□ -2.13
SMC4YLR086W PHR1P05066 565 aaKnown RBP RIP-Chip data1.76□□□□□ -2.13not detected
SMC4YLR086W NOT3P06102 836 aaKnown RBP1.76□□□□□ -2.13
SMC4YLR086W SWI6P09959 803 aa1.76□□□□□ -2.13
SMC4YLR086W HEM12P32347 362 aaPredicted RBP1.76□□□□□ -2.13
SMC4YLR086W TAT1P38085 619 aa1.76□□□□□ -2.13
SMC4YLR086W RPN10P38886 268 aaKnown RBP1.76□□□□□ -2.13
SMC4YLR086W SET5P38890 526 aaKnown RBP1.76□□□□□ -2.13
SMC4YLR086W YJR096WP47137 282 aa1.76□□□□□ -2.13
SMC4YLR086W ENP2P48234 707 aaKnown RBP1.76□□□□□ -2.13
SMC4YLR086W NCS6P53088 359 aa1.76□□□□□ -2.13
SMC4YLR086W YGR012WP53206 393 aa1.76□□□□□ -2.13
SMC4YLR086W NOP12Q08208 459 aaKnown RBP1.76□□□□□ -2.13
SMC4YLR086W MED7Q08278 222 aa1.76□□□□□ -2.13
SMC4YLR086W ENB1Q08299 606 aa1.76□□□□□ -2.13
SMC4YLR086W TMA17Q12513 150 aa1.76□□□□□ -2.13
SMC4YLR086W ATG11Q12527 1178 aa1.76□□□□□ -2.13
SMC4YLR086W SGS1P35187 1447 aa1.76□□□□□ -2.13
SMC4YLR086W HIS5P07172 385 aa1.76□□□□□ -2.13
SMC4YLR086W AEP2P22136 580 aa1.76□□□□□ -2.13
SMC4YLR086W GAR1P28007 205 aaKnown RBP1.76□□□□□ -2.13
SMC4YLR086W TSA1P34760 196 aaKnown RBP1.76□□□□□ -2.13
SMC4YLR086W WHI3P34761 661 aaKnown RBP1.76□□□□□ -2.13
SMC4YLR086W SSZ1P38788 538 aaKnown RBP1.76□□□□□ -2.13
SMC4YLR086W SLN1P39928 1220 aaPredicted RBP1.76□□□□□ -2.13
SMC4YLR086W NUG1P40010 520 aaKnown RBP1.76□□□□□ -2.13
SMC4YLR086W PEA2P40091 420 aa1.76□□□□□ -2.13
SMC4YLR086W TAD1P53065 400 aa1.76□□□□□ -2.13
SMC4YLR086W CNM67P53865 581 aaKnown RBP1.76□□□□□ -2.13
SMC4YLR086W ECM9Q02202 377 aa1.76□□□□□ -2.13
SMC4YLR086W VPS30Q02948 557 aa1.76□□□□□ -2.13
SMC4YLR086W SKY1Q03656 742 aa1.76□□□□□ -2.13
SMC4YLR086W YDR338CQ05497 695 aa1.76□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms