RNA–Protein interactions for RNA: YKL112W

ABF1, Transcript of DNA binding protein with possible chromatin-reorganizing activity, yeastyeast

Gene ABF1, Length 2,196 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABF1YKL112W TFB1P32776 642 aa5.04□□□□□ -1.6
ABF1YKL112W MIA40P36046 403 aa5.04□□□□□ -1.6
ABF1YKL112W BOI1P38041 980 aaKnown RBP5.04□□□□□ -1.6
ABF1YKL112W YHL050CP38721 697 aa5.04□□□□□ -1.6
ABF1YKL112W GGA2P38817 585 aaKnown RBP5.04□□□□□ -1.6
ABF1YKL112W MAD1P40957 749 aa5.04□□□□□ -1.6
ABF1YKL112W SHE4P51534 789 aa5.04□□□□□ -1.6
ABF1YKL112W NCS2P53923 493 aaPredicted RBP5.04□□□□□ -1.6
ABF1YKL112W ADE12P80210 433 aaKnown RBP5.04□□□□□ -1.6
ABF1YKL112W SPO19Q03029 223 aa5.04□□□□□ -1.6
ABF1YKL112W RIO1Q12196 484 aaKnown RBP5.04□□□□□ -1.6
ABF1YKL112W YEL077CQ3E7X8 1277 aa5.04□□□□□ -1.6
ABF1YKL112W SEC2P17065 759 aa5.04□□□□□ -1.6
ABF1YKL112W REC107P21651 314 aa5.04□□□□□ -1.6
ABF1YKL112W RSC6P25632 483 aa5.04□□□□□ -1.6
ABF1YKL112W MCM2P29469 868 aa5.04□□□□□ -1.6
ABF1YKL112W SET3P36124 751 aa5.04□□□□□ -1.6
ABF1YKL112W RIM11P38615 370 aa5.04□□□□□ -1.6
ABF1YKL112W YHR131CP38835 850 aa5.04□□□□□ -1.6
ABF1YKL112W SMC2P38989 1170 aaKnown RBP5.04□□□□□ -1.6
ABF1YKL112W SUM1P46676 1062 aa5.04□□□□□ -1.6
ABF1YKL112W IML2P47031 731 aa5.04□□□□□ -1.6
ABF1YKL112W YJR107WP47145 328 aa5.04□□□□□ -1.6
ABF1YKL112W HST1P53685 503 aa5.04□□□□□ -1.6
ABF1YKL112W COG6P53959 839 aa5.04□□□□□ -1.6
ABF1YKL112W SPN1Q06505 410 aaPredicted RBP5.04□□□□□ -1.6
ABF1YKL112W ICL2Q12031 575 aa5.04□□□□□ -1.6
ABF1YKL112W REC8Q12188 680 aa5.04□□□□□ -1.6
ABF1YKL112W AHC1Q12433 566 aa5.04□□□□□ -1.6
ABF1YKL112W TMA7Q3E764 64 aaKnown RBP5.04□□□□□ -1.6
ABF1YKL112W SRM1P21827 482 aa5.03□□□□□ -1.6
ABF1YKL112W PAP1P29468 568 aaKnown RBP5.03□□□□□ -1.6
ABF1YKL112W YEL1P34225 687 aa5.03□□□□□ -1.6
ABF1YKL112W APD1P38281 316 aa5.03□□□□□ -1.6
ABF1YKL112W ERC1P38767 581 aa5.03□□□□□ -1.6
ABF1YKL112W SPL2P38839 148 aa5.03□□□□□ -1.6
ABF1YKL112W SPC72P39723 622 aa5.03□□□□□ -1.6
ABF1YKL112W ALD5P40047 520 aaKnown RBP5.03□□□□□ -1.6
ABF1YKL112W RIM21P48565 533 aa5.03□□□□□ -1.6
ABF1YKL112W FOL2P51601 243 aaKnown RBP5.03□□□□□ -1.6
ABF1YKL112W YMR018WQ04364 514 aa5.03□□□□□ -1.6
ABF1YKL112W BRX1Q08235 291 aaKnown RBP5.03□□□□□ -1.6
ABF1YKL112W YPL277CQ08989 487 aa5.03□□□□□ -1.6
ABF1YKL112W OSH2Q12451 1283 aa5.03□□□□□ -1.6
ABF1YKL112W ARG82P07250 355 aa5.02□□□□□ -1.61
ABF1YKL112W CNS1P33313 385 aa5.02□□□□□ -1.61
ABF1YKL112W NUF2P33895 451 aa5.02□□□□□ -1.61
ABF1YKL112W UIP5P36137 443 aa5.02□□□□□ -1.61
ABF1YKL112W YBL036CP38197 257 aa5.02□□□□□ -1.61
ABF1YKL112W YIL166CP40445 542 aa5.02□□□□□ -1.61
ABF1YKL112W HUL4P40985 892 aa5.02□□□□□ -1.61
ABF1YKL112W ROG3P43602 733 aa5.02□□□□□ -1.61
ABF1YKL112W TRF5P48561 642 aaKnown RBP5.02□□□□□ -1.61
ABF1YKL112W MNP1P53163 194 aaPredicted RBP5.02□□□□□ -1.61
ABF1YKL112W NSE5Q03718 556 aa5.02□□□□□ -1.61
ABF1YKL112W ECM11Q04110 302 aa5.02□□□□□ -1.61
ABF1YKL112W MNL2Q12205 849 aa5.02□□□□□ -1.61
ABF1YKL112W TAF3Q12297 353 aa5.02□□□□□ -1.61
ABF1YKL112W PGI1P12709 554 aaKnown RBP5.02□□□□□ -1.61
ABF1YKL112W GUT1P32190 709 aa5.02□□□□□ -1.61
ABF1YKL112W ASF2P32448 525 aaPredicted RBP5.02□□□□□ -1.61
ABF1YKL112W SSZ1P38788 538 aaKnown RBP5.02□□□□□ -1.61
ABF1YKL112W ECM1P39715 212 aa5.02□□□□□ -1.61
ABF1YKL112W KXD1P53158 218 aa5.02□□□□□ -1.61
ABF1YKL112W DCP2P53550 970 aaKnown RBP5.02□□□□□ -1.61
ABF1YKL112W NAB6Q03735 1134 aaKnown RBP RIP-Chip data5.02□□□□□ -1.61not detected
ABF1YKL112W COX6P00427 148 aa5.01□□□□□ -1.61
ABF1YKL112W CIT1P00890 479 aa5.01□□□□□ -1.61
ABF1YKL112W TEF1P02994 458 aaKnown RBP5.01□□□□□ -1.61
ABF1YKL112W PPQ1P32945 549 aa5.01□□□□□ -1.61
ABF1YKL112W ECM4P36156 370 aa5.01□□□□□ -1.61
ABF1YKL112W PET100P38958 111 aa5.01□□□□□ -1.61
ABF1YKL112W PCL7P40186 285 aa5.01□□□□□ -1.61
ABF1YKL112W NUP82P40368 713 aa5.01□□□□□ -1.61
ABF1YKL112W GPP1P41277 250 aaKnown RBP5.01□□□□□ -1.61
ABF1YKL112W YJR120WP47157 116 aa5.01□□□□□ -1.61
ABF1YKL112W RPT4P53549 437 aaKnown RBP5.01□□□□□ -1.61
ABF1YKL112W PTA1Q01329 785 aaPredicted RBP5.01□□□□□ -1.61
ABF1YKL112W MED1Q12321 566 aa5.01□□□□□ -1.61
ABF1YKL112W STF1P01098 86 aa5.01□□□□□ -1.61
ABF1YKL112W TRM1P15565 570 aaKnown RBP5.01□□□□□ -1.61
ABF1YKL112W PFK2P16862 959 aaKnown RBP RIP-Chip data5.01□□□□□ -1.61not detected
ABF1YKL112W PLC1P32383 869 aa5.01□□□□□ -1.61
ABF1YKL112W PIH1P38768 344 aa5.01□□□□□ -1.61
ABF1YKL112W TOK1P40310 691 aa5.01□□□□□ -1.61
ABF1YKL112W VNX1P42839 908 aa5.01□□□□□ -1.61
ABF1YKL112W YMR1P47147 688 aaKnown RBP RIP-Chip data5.01□□□□□ -1.61not detected
ABF1YKL112W PEX14P53112 341 aa5.01□□□□□ -1.61
ABF1YKL112W YNL144CP53907 740 aa5.01□□□□□ -1.61
ABF1YKL112W UBX4P54730 416 aa5.01□□□□□ -1.61
ABF1YKL112W FDC1Q03034 503 aa5.01□□□□□ -1.61
ABF1YKL112W TAF11Q04226 346 aa5.01□□□□□ -1.61
ABF1YKL112W GAD1Q04792 585 aa5.01□□□□□ -1.61
ABF1YKL112W MCP2Q06567 569 aa5.01□□□□□ -1.61
ABF1YKL112W PIN2Q12057 282 aa5.01□□□□□ -1.61
ABF1YKL112W PSF3Q12146 194 aa5.01□□□□□ -1.61
ABF1YKL112W FRT1Q99332 602 aa5.01□□□□□ -1.61
ABF1YKL112W TEL1P38110 2787 aa5□□□□□ -1.61
ABF1YKL112W MRM1P25270 412 aa5□□□□□ -1.61
ABF1YKL112W OCA4P25366 362 aa5□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 122.4 ms