RNA–Protein interactions for RNA: YKL099C

UTP11, Transcript of Subunit of U3-containing Small Subunit (SSU) processome complex, yeast

Gene UTP11, Length 753 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UTP11	YKL099C	PWP2	P25635	923 aa	Known RBP	4.67	□□□□□ -1.66
UTP11	YKL099C	DID4	P36108	232 aa		4.67	□□□□□ -1.66
UTP11	YKL099C	PES4	P39684	611 aa		4.67	□□□□□ -1.66
UTP11	YKL099C	ALD5	P40047	520 aa	Known RBP	4.67	□□□□□ -1.66
UTP11	YKL099C	FMP10	P40098	244 aa		4.67	□□□□□ -1.66
UTP11	YKL099C	RPS7B	P48164	190 aa	Known RBP	4.67	□□□□□ -1.66
UTP11	YKL099C	YRB30	P53107	440 aa	Predicted RBP	4.67	□□□□□ -1.66
UTP11	YKL099C	PIB2	P53191	635 aa		4.67	□□□□□ -1.66
UTP11	YKL099C	EMI2	Q04409	500 aa	Known RBP	4.67	□□□□□ -1.66
UTP11	YKL099C	YMR321C	Q04898	105 aa		4.67	□□□□□ -1.66
UTP11	YKL099C	EMG1	Q06287	252 aa	Known RBP	4.67	□□□□□ -1.66
UTP11	YKL099C	BRE1	Q07457	700 aa	Known RBP	4.67	□□□□□ -1.66
UTP11	YKL099C	LSO1	Q3E827	93 aa		4.67	□□□□□ -1.66
UTP11	YKL099C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.66	□□□□□ -1.66	not detected
UTP11	YKL099C	SES1	P07284	462 aa	Known RBP	4.66	□□□□□ -1.66
UTP11	YKL099C	RPB10	P22139	70 aa		4.66	□□□□□ -1.66
UTP11	YKL099C	SEC20	P28791	383 aa		4.66	□□□□□ -1.66
UTP11	YKL099C	NDT80	P38830	627 aa		4.66	□□□□□ -1.66
UTP11	YKL099C	RGD2	P43556	714 aa		4.66	□□□□□ -1.66
UTP11	YKL099C	SPO74	P45819	413 aa		4.66	□□□□□ -1.66
UTP11	YKL099C	PSP2	P50109	593 aa	Known RBP	4.66	□□□□□ -1.66
UTP11	YKL099C	PPT1	P53043	513 aa		4.66	□□□□□ -1.66
UTP11	YKL099C	LIF1	P53150	421 aa		4.66	□□□□□ -1.66
UTP11	YKL099C	RPS15	Q01855	142 aa	Known RBP	4.66	□□□□□ -1.66
UTP11	YKL099C	LCD1	Q04377	747 aa		4.66	□□□□□ -1.66
UTP11	YKL099C	TY1B-A	O13527	1196 aa	Known RBP	4.65	□□□□□ -1.67
UTP11	YKL099C	NUC1	P08466	329 aa		4.65	□□□□□ -1.67
UTP11	YKL099C	FUB1	P25659	250 aa		4.65	□□□□□ -1.67
UTP11	YKL099C	URK1	P27515	501 aa		4.65	□□□□□ -1.67
UTP11	YKL099C	ANP1	P32629	500 aa		4.65	□□□□□ -1.67
UTP11	YKL099C	PGM1	P33401	570 aa	Known RBP	4.65	□□□□□ -1.67
UTP11	YKL099C	DBP7	P36120	742 aa	Known RBP	4.65	□□□□□ -1.67
UTP11	YKL099C	RFC1	P38630	861 aa	Known RBP	4.65	□□□□□ -1.67
UTP11	YKL099C	RRM3	P38766	723 aa		4.65	□□□□□ -1.67
UTP11	YKL099C	BOL3	P39724	118 aa		4.65	□□□□□ -1.67
UTP11	YKL099C	TPM2	P40414	161 aa		4.65	□□□□□ -1.67
UTP11	YKL099C	HXT8	P40886	569 aa		4.65	□□□□□ -1.67
UTP11	YKL099C	FMS1	P50264	508 aa		4.65	□□□□□ -1.67
UTP11	YKL099C	RPT6	Q01939	405 aa	Known RBP	4.65	□□□□□ -1.67
UTP11	YKL099C	SKY1	Q03656	742 aa		4.65	□□□□□ -1.67
UTP11	YKL099C	SPO71	Q03868	1245 aa		4.65	□□□□□ -1.67
UTP11	YKL099C	SLP1	Q12232	587 aa		4.65	□□□□□ -1.67
UTP11	YKL099C	RLF2	Q12495	606 aa		4.65	□□□□□ -1.67
UTP11	YKL099C	TFA2	P36145	328 aa		4.64	□□□□□ -1.67
UTP11	YKL099C	DRE2	P36152	348 aa		4.64	□□□□□ -1.67
UTP11	YKL099C	TVP23	P38962	199 aa		4.64	□□□□□ -1.67
UTP11	YKL099C	MET13	P53128	600 aa		4.64	□□□□□ -1.67
UTP11	YKL099C	YGL081W	P53156	320 aa		4.64	□□□□□ -1.67
UTP11	YKL099C	GUD1	Q07729	489 aa		4.64	□□□□□ -1.67
UTP11	YKL099C	GPI13	Q07830	1017 aa		4.64	□□□□□ -1.67
UTP11	YKL099C	CLF1	Q12309	687 aa	Predicted RBP	4.64	□□□□□ -1.67
UTP11	YKL099C	PRC1	P00729	532 aa		4.63	□□□□□ -1.67
UTP11	YKL099C	MSD1	P15179	658 aa	Known RBP	4.63	□□□□□ -1.67
UTP11	YKL099C	RPL8A	P17076	256 aa	Known RBP	4.63	□□□□□ -1.67
UTP11	YKL099C	OPI1	P21957	404 aa		4.63	□□□□□ -1.67
UTP11	YKL099C	SYN8	P31377	255 aa		4.63	□□□□□ -1.67
UTP11	YKL099C	GIP2	P40036	548 aa		4.63	□□□□□ -1.67
UTP11	YKL099C	TED1	P40533	473 aa		4.63	□□□□□ -1.67
UTP11	YKL099C	FAF1	P40546	346 aa	Predicted RBP	4.63	□□□□□ -1.67
UTP11	YKL099C	INP52	P50942	1183 aa		4.63	□□□□□ -1.67
UTP11	YKL099C	MRPS35	P53292	345 aa		4.63	□□□□□ -1.67
UTP11	YKL099C	RSC2	Q06488	889 aa		4.63	□□□□□ -1.67
UTP11	YKL099C	VIP1	Q06685	1146 aa	Known RBP	4.63	□□□□□ -1.67
UTP11	YKL099C	SSF2	Q12153	453 aa	Predicted RBP	4.63	□□□□□ -1.67
UTP11	YKL099C	GLT1	Q12680	2145 aa	Known RBP	4.63	□□□□□ -1.67
UTP11	YKL099C	TY4B-P	A0A0B7P3V8	1104 aa		4.62	□□□□□ -1.67
UTP11	YKL099C	SAC7	P17121	654 aa		4.62	□□□□□ -1.67
UTP11	YKL099C	CDC48	P25694	835 aa	Known RBP	4.62	□□□□□ -1.67
UTP11	YKL099C	SFA1	P32771	386 aa		4.62	□□□□□ -1.67
UTP11	YKL099C	NTA1	P40354	457 aa		4.62	□□□□□ -1.67
UTP11	YKL099C	ALG2	P43636	503 aa		4.62	□□□□□ -1.67
UTP11	YKL099C	CTR1	P49573	406 aa		4.62	□□□□□ -1.67
UTP11	YKL099C	SUT1	P53032	299 aa	Known RBP	4.62	□□□□□ -1.67
UTP11	YKL099C	ARI1	P53111	347 aa	Known RBP	4.62	□□□□□ -1.67
UTP11	YKL099C	TPO2	P53283	614 aa		4.62	□□□□□ -1.67
UTP11	YKL099C	SOK2	P53438	785 aa	Predicted RBP	4.62	□□□□□ -1.67
UTP11	YKL099C	YML020W	Q03722	664 aa		4.62	□□□□□ -1.67
UTP11	YKL099C	MAG2	Q06436	670 aa	Known RBP	4.62	□□□□□ -1.67
UTP11	YKL099C	OXR1	Q08952	273 aa		4.62	□□□□□ -1.67
UTP11	YKL099C	TY4A-H	Q6Q5P6	413 aa		4.62	□□□□□ -1.67
UTP11	YKL099C	CCH1	P50077	2039 aa		4.62	□□□□□ -1.67
UTP11	YKL099C	IMP2'	P32351	346 aa		4.61	□□□□□ -1.67
UTP11	YKL099C	RRN6	P32786	894 aa		4.61	□□□□□ -1.67
UTP11	YKL099C	MYO3	P36006	1272 aa		4.61	□□□□□ -1.67
UTP11	YKL099C	APN2	P38207	520 aa		4.61	□□□□□ -1.67
UTP11	YKL099C	POA1	P38218	177 aa		4.61	□□□□□ -1.67
UTP11	YKL099C	BIO5	P53744	561 aa	Known RBP	4.61	□□□□□ -1.67
UTP11	YKL099C	PTA1	Q01329	785 aa	Predicted RBP	4.61	□□□□□ -1.67
UTP11	YKL099C	MDM1	Q01846	1127 aa		4.61	□□□□□ -1.67
UTP11	YKL099C	ECM16	Q04217	1267 aa	Known RBP	4.61	□□□□□ -1.67
UTP11	YKL099C	SPN1	Q06505	410 aa	Predicted RBP	4.61	□□□□□ -1.67
UTP11	YKL099C	SOG2	Q08817	791 aa		4.61	□□□□□ -1.67
UTP11	YKL099C	CIT1	P00890	479 aa		4.6	□□□□□ -1.67
UTP11	YKL099C	MAK31	P23059	88 aa		4.6	□□□□□ -1.67
UTP11	YKL099C	MSS51	P32335	436 aa		4.6	□□□□□ -1.67
UTP11	YKL099C	RER2	P35196	286 aa		4.6	□□□□□ -1.67
UTP11	YKL099C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.6	□□□□□ -1.67	not detected
UTP11	YKL099C	AIM46	P38885	310 aa		4.6	□□□□□ -1.67
UTP11	YKL099C	HMF1	P40037	129 aa	Known RBP	4.6	□□□□□ -1.67
UTP11	YKL099C	CSM2	P40465	213 aa		4.6	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 9.7 ms