RNA–Protein interactions for RNA: YJR029W

YJR029W, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YJR029W, Length 5,268 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YJR029WYJR029W IDI1P15496 288 aa1.13□□□□□ -2.23
YJR029WYJR029W COQ3P27680 312 aa1.13□□□□□ -2.23
YJR029WYJR029W PRO3P32263 286 aaKnown RBP1.13□□□□□ -2.23
YJR029WYJR029W YKL222CP35995 705 aa1.13□□□□□ -2.23
YJR029WYJR029W YKL075CP36083 450 aa1.13□□□□□ -2.23
YJR029WYJR029W YHR020WP38708 688 aaKnown RBP1.13□□□□□ -2.23
YJR029WYJR029W ERP5P38819 212 aa1.13□□□□□ -2.23
YJR029WYJR029W RGA1P39083 1007 aa1.13□□□□□ -2.23
YJR029WYJR029W SCC4P40090 624 aa1.13□□□□□ -2.23
YJR029WYJR029W ATF1P40353 525 aa1.13□□□□□ -2.23
YJR029WYJR029W ALD4P46367 519 aaKnown RBP1.13□□□□□ -2.23
YJR029WYJR029W PFD1P46988 109 aa1.13□□□□□ -2.23
YJR029WYJR029W YJL045WP47052 634 aa1.13□□□□□ -2.23
YJR029WYJR029W PRP31P49704 494 aaPredicted RBP1.13□□□□□ -2.23
YJR029WYJR029W HNT2P49775 206 aa1.13□□□□□ -2.23
YJR029WYJR029W MNN10P50108 393 aaKnown RBP1.13□□□□□ -2.23
YJR029WYJR029W SHE10P53075 577 aa1.13□□□□□ -2.23
YJR029WYJR029W ATG1P53104 897 aa1.13□□□□□ -2.23
YJR029WYJR029W YGL140CP53120 1219 aa1.13□□□□□ -2.23
YJR029WYJR029W YNR065CP53751 1116 aa1.13□□□□□ -2.23
YJR029WYJR029W NAF1P53919 492 aaKnown RBP1.13□□□□□ -2.23
YJR029WYJR029W SEN54Q02825 467 aaPredicted RBP1.13□□□□□ -2.23
YJR029WYJR029W YDR541CQ03049 344 aa1.13□□□□□ -2.23
YJR029WYJR029W JIP4Q03361 876 aa1.13□□□□□ -2.23
YJR029WYJR029W CRF1Q04930 467 aa1.13□□□□□ -2.23
YJR029WYJR029W THP3Q12049 470 aaKnown RBP1.13□□□□□ -2.23
YJR029WYJR029W CDC33P07260 213 aaKnown RBP1.13□□□□□ -2.23
YJR029WYJR029W GSY2P27472 705 aa1.13□□□□□ -2.23
YJR029WYJR029W EFT1P32324 842 aaKnown RBP1.13□□□□□ -2.23
YJR029WYJR029W PLC1P32383 869 aa1.13□□□□□ -2.23
YJR029WYJR029W NGG1P32494 702 aa1.13□□□□□ -2.23
YJR029WYJR029W ECM32P32644 1121 aaKnown RBP1.13□□□□□ -2.23
YJR029WYJR029W MRS6P32864 603 aaKnown RBP1.13□□□□□ -2.23
YJR029WYJR029W YKL133CP36066 463 aa1.13□□□□□ -2.23
YJR029WYJR029W CCZ1P38273 704 aa1.13□□□□□ -2.23
YJR029WYJR029W SLI15P38283 698 aa1.13□□□□□ -2.23
YJR029WYJR029W RGD1P38339 666 aa1.13□□□□□ -2.23
YJR029WYJR029W EFM2P38347 419 aa1.13□□□□□ -2.23
YJR029WYJR029W YHR054CP38780 354 aa1.13□□□□□ -2.23
YJR029WYJR029W RTR1P40084 226 aaPredicted RBP1.13□□□□□ -2.23
YJR029WYJR029W INA22P40576 216 aa1.13□□□□□ -2.23
YJR029WYJR029W MNN11P46985 422 aaKnown RBP1.13□□□□□ -2.23
YJR029WYJR029W EMC2P47133 292 aaKnown RBP1.13□□□□□ -2.23
YJR029WYJR029W FAA4P47912 694 aaKnown RBP1.13□□□□□ -2.23
YJR029WYJR029W GET1P53192 235 aa1.13□□□□□ -2.23
YJR029WYJR029W UBP16Q02863 499 aa1.13□□□□□ -2.23
YJR029WYJR029W RLI1Q03195 608 aaKnown RBP1.13□□□□□ -2.23
YJR029WYJR029W GIR2Q03768 265 aaPredicted RBP1.13□□□□□ -2.23
YJR029WYJR029W KAR5Q04746 504 aa1.13□□□□□ -2.23
YJR029WYJR029W YDL129WQ07555 291 aa1.13□□□□□ -2.23
YJR029WYJR029W PSR2Q07949 397 aa1.13□□□□□ -2.23
YJR029WYJR029W RIM20Q12033 661 aa1.13□□□□□ -2.23
YJR029WYJR029W SEC3P33332 1336 aaKnown RBP1.13□□□□□ -2.23
YJR029WYJR029W RAD2P07276 1031 aa1.12□□□□□ -2.23
YJR029WYJR029W ILS1P09436 1072 aaKnown RBP1.12□□□□□ -2.23
YJR029WYJR029W HSF1P10961 833 aa1.12□□□□□ -2.23
YJR029WYJR029W HOP1P20050 605 aa1.12□□□□□ -2.23
YJR029WYJR029W PRI2P20457 528 aa1.12□□□□□ -2.23
YJR029WYJR029W PRP28P23394 588 aa1.12□□□□□ -2.23
YJR029WYJR029W PRP22P24384 1145 aaKnown RBP1.12□□□□□ -2.23
YJR029WYJR029W NPL6P32832 435 aa1.12□□□□□ -2.23
YJR029WYJR029W RTC2P38279 296 aa1.12□□□□□ -2.23
YJR029WYJR029W SHU2P38957 223 aa1.12□□□□□ -2.23
YJR029WYJR029W MET18P40469 1032 aa1.12□□□□□ -2.23
YJR029WYJR029W BUD27P43573 796 aaKnown RBP RIP-Chip data1.12□□□□□ -2.23not detected
YJR029WYJR029W ECL1P48235 211 aa1.12□□□□□ -2.23
YJR029WYJR029W UBC12P52491 188 aa1.12□□□□□ -2.23
YJR029WYJR029W NCS6P53088 359 aa1.12□□□□□ -2.23
YJR029WYJR029W YGL036WP53185 909 aaPredicted RBP1.12□□□□□ -2.23
YJR029WYJR029W YNL115CP53925 644 aa1.12□□□□□ -2.23
YJR029WYJR029W UBP2Q01476 1272 aa1.12□□□□□ -2.23
YJR029WYJR029W RPS15Q01855 142 aaKnown RBP1.12□□□□□ -2.23
YJR029WYJR029W BUL2Q03758 920 aaKnown RBP1.12□□□□□ -2.23
YJR029WYJR029W YAP6Q03935 383 aa1.12□□□□□ -2.23
YJR029WYJR029W CDA2Q06703 312 aa1.12□□□□□ -2.23
YJR029WYJR029W YDL114WQ07530 308 aa1.12□□□□□ -2.23
YJR029WYJR029W SPO75Q07798 868 aa1.12□□□□□ -2.23
YJR029WYJR029W RTT10Q08924 1013 aa1.12□□□□□ -2.23
YJR029WYJR029W ZRT2Q12436 422 aa1.12□□□□□ -2.23
YJR029WYJR029W SEC39Q12745 709 aa1.12□□□□□ -2.23
YJR029WYJR029W FLP1P03870 423 aa1.12□□□□□ -2.23
YJR029WYJR029W THS1P04801 734 aaKnown RBP1.12□□□□□ -2.23
YJR029WYJR029W NFT1P0CE68 1218 aa1.12□□□□□ -2.23
YJR029WYJR029W RAD18P10862 487 aa1.12□□□□□ -2.23
YJR029WYJR029W APA1P16550 321 aaKnown RBP1.12□□□□□ -2.23
YJR029WYJR029W OLE1P21147 510 aaKnown RBP1.12□□□□□ -2.23
YJR029WYJR029W ARG1P22768 420 aa1.12□□□□□ -2.23
YJR029WYJR029W KIP1P28742 1111 aa1.12□□□□□ -2.23
YJR029WYJR029W PRO1P32264 428 aa1.12□□□□□ -2.23
YJR029WYJR029W PRP18P33411 251 aaPredicted RBP1.12□□□□□ -2.23
YJR029WYJR029W PRX1P34227 261 aaKnown RBP1.12□□□□□ -2.23
YJR029WYJR029W TSA1P34760 196 aaKnown RBP1.12□□□□□ -2.23
YJR029WYJR029W YBR053CP38235 358 aa1.12□□□□□ -2.23
YJR029WYJR029W TRM7P38238 310 aaKnown RBP1.12□□□□□ -2.23
YJR029WYJR029W LYS9P38999 446 aa1.12□□□□□ -2.23
YJR029WYJR029W CCT2P39076 527 aaKnown RBP1.12□□□□□ -2.23
YJR029WYJR029W MBP1P39678 833 aa1.12□□□□□ -2.23
YJR029WYJR029W YER135CP40082 130 aa1.12□□□□□ -2.23
YJR029WYJR029W TAF1P46677 1066 aa1.12□□□□□ -2.23
YJR029WYJR029W YAR1P46683 200 aa1.12□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms