RNA–Protein interactions for RNA: YJL172W

CPS1, Transcript of Vacuolar carboxypeptidase S, yeast

Gene CPS1, Length 1,731 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CPS1	YJL172W	DBP9	Q06218	594 aa	Known RBP	5.21	□□□□□ -1.58
CPS1	YJL172W	SPP382	Q06411	708 aa	Predicted RBP	5.21	□□□□□ -1.58
CPS1	YJL172W	DNL4	Q08387	944 aa	Predicted RBP	5.21	□□□□□ -1.58
CPS1	YJL172W	YOR352W	Q08816	343 aa		5.21	□□□□□ -1.58
CPS1	YJL172W	YPL225W	Q08971	146 aa	Known RBP	5.21	□□□□□ -1.58
CPS1	YJL172W	APC11	Q12157	165 aa		5.21	□□□□□ -1.58
CPS1	YJL172W	RIO1	Q12196	484 aa	Known RBP	5.21	□□□□□ -1.58
CPS1	YJL172W	YBL111C	Q3E7Y5	667 aa		5.21	□□□□□ -1.58
CPS1	YJL172W	RAD61	Q99359	647 aa		5.21	□□□□□ -1.58
CPS1	YJL172W	DUR1,2	P32528	1835 aa	Known RBP	5.21	□□□□□ -1.58
CPS1	YJL172W	CIT2	P08679	460 aa		5.2	□□□□□ -1.58
CPS1	YJL172W	TRL1	P09880	827 aa	Known RBP	5.2	□□□□□ -1.58
CPS1	YJL172W	BIK1	P11709	440 aa		5.2	□□□□□ -1.58
CPS1	YJL172W	SRM1	P21827	482 aa		5.2	□□□□□ -1.58
CPS1	YJL172W	SLY41	P22215	453 aa		5.2	□□□□□ -1.58
CPS1	YJL172W	STN1	P38960	494 aa		5.2	□□□□□ -1.58
CPS1	YJL172W	SRB7	P47822	140 aa		5.2	□□□□□ -1.58
CPS1	YJL172W	RRT6	P53117	311 aa	Predicted RBP	5.2	□□□□□ -1.58
CPS1	YJL172W	NSG2	P53898	299 aa		5.2	□□□□□ -1.58
CPS1	YJL172W	OYE2	Q03558	400 aa	Known RBP	5.2	□□□□□ -1.58
CPS1	YJL172W	RRN11	Q04712	507 aa		5.2	□□□□□ -1.58
CPS1	YJL172W	YDL124W	Q07551	312 aa	Known RBP	5.2	□□□□□ -1.58
CPS1	YJL172W	CHO2	P05374	869 aa	Known RBP	5.2	□□□□□ -1.58
CPS1	YJL172W	ARD1	P07347	238 aa	Predicted RBP	5.2	□□□□□ -1.58
CPS1	YJL172W	DID4	P36108	232 aa		5.2	□□□□□ -1.58
CPS1	YJL172W	CST26	P38226	397 aa		5.2	□□□□□ -1.58
CPS1	YJL172W	APD1	P38281	316 aa		5.2	□□□□□ -1.58
CPS1	YJL172W	MXR1	P40029	184 aa		5.2	□□□□□ -1.58
CPS1	YJL172W	MAD1	P40957	749 aa		5.2	□□□□□ -1.58
CPS1	YJL172W	YKE2	P52553	114 aa		5.2	□□□□□ -1.58
CPS1	YJL172W	LSC1	P53598	329 aa	Known RBP	5.2	□□□□□ -1.58
CPS1	YJL172W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	5.2	□□□□□ -1.58	not detected
CPS1	YJL172W	RPN4	Q03465	531 aa		5.2	□□□□□ -1.58
CPS1	YJL172W	ISA1	Q07821	250 aa	Predicted RBP	5.2	□□□□□ -1.58
CPS1	YJL172W	RRP36	Q12481	300 aa	Predicted RBP	5.2	□□□□□ -1.58
CPS1	YJL172W	PMS1	P14242	873 aa		5.19	□□□□□ -1.58
CPS1	YJL172W	RIT1	P23796	513 aa		5.19	□□□□□ -1.58
CPS1	YJL172W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	5.19	□□□□□ -1.58	not detected
CPS1	YJL172W	YDJ1	P25491	409 aa	Known RBP	5.19	□□□□□ -1.58
CPS1	YJL172W	PTR2	P32901	601 aa		5.19	□□□□□ -1.58
CPS1	YJL172W	SMY2	P32909	740 aa	Known RBP	5.19	□□□□□ -1.58
CPS1	YJL172W	MYO3	P36006	1272 aa		5.19	□□□□□ -1.58
CPS1	YJL172W	RXT2	P38255	430 aa		5.19	□□□□□ -1.58
CPS1	YJL172W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	5.19	□□□□□ -1.58	not detected
CPS1	YJL172W	AIM9	P40053	627 aa	Known RBP	5.19	□□□□□ -1.58
CPS1	YJL172W	TMN3	P40071	706 aa		5.19	□□□□□ -1.58
CPS1	YJL172W	DAS1	P47005	663 aa		5.19	□□□□□ -1.58
CPS1	YJL172W	YNL115C	P53925	644 aa		5.19	□□□□□ -1.58
CPS1	YJL172W	KRE28	Q04431	385 aa		5.19	□□□□□ -1.58
CPS1	YJL172W	YIG1	Q08956	461 aa		5.19	□□□□□ -1.58
CPS1	YJL172W	NCR1	Q12200	1170 aa		5.19	□□□□□ -1.58
CPS1	YJL172W	CSR2	Q12734	1121 aa		5.19	□□□□□ -1.58
CPS1	YJL172W	PGA3	Q12746	312 aa	Known RBP	5.19	□□□□□ -1.58
CPS1	YJL172W	HEM1	P09950	548 aa	Predicted RBP	5.18	□□□□□ -1.58
CPS1	YJL172W	SUP45	P12385	437 aa	Known RBP	5.18	□□□□□ -1.58
CPS1	YJL172W	MRPS28	P21771	286 aa		5.18	□□□□□ -1.58
CPS1	YJL172W	MAK31	P23059	88 aa		5.18	□□□□□ -1.58
CPS1	YJL172W	RPL8B	P29453	256 aa	Known RBP	5.18	□□□□□ -1.58
CPS1	YJL172W	NUD1	P32336	851 aa		5.18	□□□□□ -1.58
CPS1	YJL172W	CSE1	P33307	960 aa		5.18	□□□□□ -1.58
CPS1	YJL172W	PTH2	P34222	208 aa		5.18	□□□□□ -1.58
CPS1	YJL172W	NUP120	P35729	1037 aa		5.18	□□□□□ -1.58
CPS1	YJL172W	ABZ1	P37254	787 aa	Predicted RBP	5.18	□□□□□ -1.58
CPS1	YJL172W	KEL1	P38853	1164 aa	Known RBP	5.18	□□□□□ -1.58
CPS1	YJL172W	VID28	P40547	921 aa		5.18	□□□□□ -1.58
CPS1	YJL172W	CTK3	P46963	296 aa	Predicted RBP	5.18	□□□□□ -1.58
CPS1	YJL172W	EFM5	P53200	248 aa	Known RBP	5.18	□□□□□ -1.58
CPS1	YJL172W	DCP2	P53550	970 aa	Known RBP	5.18	□□□□□ -1.58
CPS1	YJL172W	NOP15	P53927	220 aa	Predicted RBP	5.18	□□□□□ -1.58
CPS1	YJL172W	SSL2	Q00578	843 aa		5.18	□□□□□ -1.58
CPS1	YJL172W	RPT6	Q01939	405 aa	Known RBP	5.18	□□□□□ -1.58
CPS1	YJL172W	ECM11	Q04110	302 aa		5.18	□□□□□ -1.58
CPS1	YJL172W	SXM1	Q04175	944 aa	Known RBP	5.18	□□□□□ -1.58
CPS1	YJL172W	ATG38	Q05789	226 aa	Known RBP	5.18	□□□□□ -1.58
CPS1	YJL172W	MAG2	Q06436	670 aa	Known RBP	5.18	□□□□□ -1.58
CPS1	YJL172W	TUF1	P02992	437 aa	Known RBP	5.17	□□□□□ -1.58
CPS1	YJL172W	SES1	P07284	462 aa	Known RBP	5.17	□□□□□ -1.58
CPS1	YJL172W	RPL19A	P0CX82	189 aa	Known RBP	5.17	□□□□□ -1.58
CPS1	YJL172W	RPL19B	P0CX83	189 aa	Predicted RBP	5.17	□□□□□ -1.58
CPS1	YJL172W	FBP26	P32604	452 aa		5.17	□□□□□ -1.58
CPS1	YJL172W	SEC8	P32855	1065 aa		5.17	□□□□□ -1.58
CPS1	YJL172W	MRPL40	P36534	297 aa		5.17	□□□□□ -1.58
CPS1	YJL172W	FUI1	P38196	639 aa		5.17	□□□□□ -1.58
CPS1	YJL172W	YHL050C	P38721	697 aa		5.17	□□□□□ -1.58
CPS1	YJL172W	PEX18	P38855	283 aa		5.17	□□□□□ -1.58
CPS1	YJL172W	YIL089W	P40500	205 aa		5.17	□□□□□ -1.58
CPS1	YJL172W	STR2	P47164	639 aa		5.17	□□□□□ -1.58
CPS1	YJL172W	ISM1	P48526	1002 aa		5.17	□□□□□ -1.58
CPS1	YJL172W	FMP30	Q02883	468 aa		5.17	□□□□□ -1.58
CPS1	YJL172W	STE20	Q03497	939 aa	Known RBP	5.17	□□□□□ -1.58
CPS1	YJL172W	INP2	Q03824	705 aa		5.17	□□□□□ -1.58
CPS1	YJL172W	POB3	Q04636	552 aa	Known RBP	5.17	□□□□□ -1.58
CPS1	YJL172W	SKG3	Q06315	1026 aa		5.17	□□□□□ -1.58
CPS1	YJL172W	RGA2	Q06407	1009 aa		5.17	□□□□□ -1.58
CPS1	YJL172W	YDL129W	Q07555	291 aa		5.17	□□□□□ -1.58
CPS1	YJL172W	LAP2	Q10740	671 aa		5.17	□□□□□ -1.58
CPS1	YJL172W	GNT1	Q12096	491 aa		5.17	□□□□□ -1.58
CPS1	YJL172W	MATALPHA2	P0CY08	210 aa		5.17	□□□□□ -1.58
CPS1	YJL172W	HMLALPHA2	P0CY09	210 aa		5.17	□□□□□ -1.58
CPS1	YJL172W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	5.17	□□□□□ -1.58	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms