RNA–Protein interactions for RNA: YJL140W

RPB4, Transcript of RNA polymerase II subunit B32, yeastyeast

Gene RPB4, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB4YJL140W HEM3P28789 327 aa6.15□□□□□ -1.42
RPB4YJL140W PRO1P32264 428 aa6.15□□□□□ -1.42
RPB4YJL140W QNS1P38795 714 aaKnown RBP6.15□□□□□ -1.42
RPB4YJL140W CSI1Q04368 295 aa6.15□□□□□ -1.42
RPB4YJL140W YLR225CQ05948 407 aaKnown RBP6.15□□□□□ -1.42
RPB4YJL140W WRS1Q12109 432 aaKnown RBP6.15□□□□□ -1.42
RPB4YJL140W GIN4Q12263 1142 aa6.15□□□□□ -1.42
RPB4YJL140W SNU66Q12420 587 aaPredicted RBP6.15□□□□□ -1.42
RPB4YJL140W PRE9P23638 258 aaKnown RBP6.14□□□□□ -1.43
RPB4YJL140W RAD24P32641 659 aa6.14□□□□□ -1.43
RPB4YJL140W MDL2P33311 773 aa6.14□□□□□ -1.43
RPB4YJL140W LRG1P35688 1017 aa6.14□□□□□ -1.43
RPB4YJL140W MAL31P38156 614 aa6.14□□□□□ -1.43
RPB4YJL140W NUG1P40010 520 aaKnown RBP6.14□□□□□ -1.43
RPB4YJL140W YNR063WP53749 607 aa6.14□□□□□ -1.43
RPB4YJL140W EST2Q06163 884 aa6.14□□□□□ -1.43
RPB4YJL140W NOP8Q08287 484 aaPredicted RBP6.14□□□□□ -1.43
RPB4YJL140W SRO9P25567 434 aaKnown RBP6.13□□□□□ -1.43
RPB4YJL140W PAH1P32567 862 aa6.13□□□□□ -1.43
RPB4YJL140W YHL012WP38709 493 aa6.13□□□□□ -1.43
RPB4YJL140W PTC7P38797 343 aa6.13□□□□□ -1.43
RPB4YJL140W PIC2P40035 300 aa6.13□□□□□ -1.43
RPB4YJL140W ENT3P47160 408 aa6.13□□□□□ -1.43
RPB4YJL140W HEM13P11353 328 aaKnown RBP6.12□□□□□ -1.43
RPB4YJL140W PFK2P16862 959 aaKnown RBP RIP-Chip data6.12□□□□□ -1.43not detected
RPB4YJL140W ASF1P32447 279 aa6.12□□□□□ -1.43
RPB4YJL140W SEG2P34250 1132 aa6.12□□□□□ -1.43
RPB4YJL140W SPO1P53541 631 aa6.12□□□□□ -1.43
RPB4YJL140W SAM35P14693 329 aa6.11□□□□□ -1.43
RPB4YJL140W CYC8P14922 966 aa6.11□□□□□ -1.43
RPB4YJL140W SWC3P31376 625 aa6.11□□□□□ -1.43
RPB4YJL140W RPT3P33298 428 aaKnown RBP6.11□□□□□ -1.43
RPB4YJL140W UBP12P39538 1254 aa6.11□□□□□ -1.43
RPB4YJL140W YFH7P43591 353 aa6.11□□□□□ -1.43
RPB4YJL140W LPX1Q12405 387 aaKnown RBP6.11□□□□□ -1.43
RPB4YJL140W VPS13Q07878 3144 aa6.1□□□□□ -1.43
RPB4YJL140W ADR1P07248 1323 aa6.1□□□□□ -1.43
RPB4YJL140W YNG2P38806 282 aaKnown RBP6.1□□□□□ -1.43
RPB4YJL140W PSF2P40359 213 aa6.1□□□□□ -1.43
RPB4YJL140W GTS1P40956 396 aa6.1□□□□□ -1.43
RPB4YJL140W YJR107WP47145 328 aa6.1□□□□□ -1.43
RPB4YJL140W FOL2P51601 243 aaKnown RBP6.1□□□□□ -1.43
RPB4YJL140W NBA1Q08229 501 aaKnown RBP6.1□□□□□ -1.43
RPB4YJL140W FBP1P09201 348 aa6.09□□□□□ -1.43
RPB4YJL140W RAD53P22216 821 aa6.09□□□□□ -1.43
RPB4YJL140W KEL1P38853 1164 aaKnown RBP6.09□□□□□ -1.43
RPB4YJL140W RPS26AP39938 119 aaKnown RBP6.09□□□□□ -1.43
RPB4YJL140W RPS26BP39939 119 aaKnown RBP6.09□□□□□ -1.43
RPB4YJL140W YJL045WP47052 634 aa6.09□□□□□ -1.43
RPB4YJL140W PPM2Q08282 695 aa6.09□□□□□ -1.43
RPB4YJL140W PMA1P05030 918 aaKnown RBP6.08□□□□□ -1.44
RPB4YJL140W RPS19AP07280 144 aaKnown RBP6.08□□□□□ -1.44
RPB4YJL140W RPS19BP07281 144 aaPredicted RBP6.08□□□□□ -1.44
RPB4YJL140W YSC84P32793 468 aa6.08□□□□□ -1.44
RPB4YJL140W ERG7P38604 731 aa6.08□□□□□ -1.44
RPB4YJL140W NMD3P38861 518 aaKnown RBP6.08□□□□□ -1.44
RPB4YJL140W UBP5P39944 805 aa6.08□□□□□ -1.44
RPB4YJL140W SIW14P53965 281 aa6.08□□□□□ -1.44
RPB4YJL140W PTC5Q12511 572 aa6.08□□□□□ -1.44
RPB4YJL140W DUR1,2P32528 1835 aaKnown RBP6.08□□□□□ -1.44
RPB4YJL140W ATE1P16639 503 aa6.07□□□□□ -1.44
RPB4YJL140W RNQ1P25367 405 aa6.07□□□□□ -1.44
RPB4YJL140W OCT1P35999 772 aa6.07□□□□□ -1.44
RPB4YJL140W NET1P47035 1189 aa6.07□□□□□ -1.44
RPB4YJL140W ENV11P53246 860 aa6.07□□□□□ -1.44
RPB4YJL140W HDA2Q06629 674 aa6.07□□□□□ -1.44
RPB4YJL140W YPL260WQ08977 551 aa6.07□□□□□ -1.44
RPB4YJL140W GAS1P22146 559 aaKnown RBP6.06□□□□□ -1.44
RPB4YJL140W KIP1P28742 1111 aa6.06□□□□□ -1.44
RPB4YJL140W SEC8P32855 1065 aa6.06□□□□□ -1.44
RPB4YJL140W PTK1P36002 662 aaPredicted RBP6.06□□□□□ -1.44
RPB4YJL140W MCD4P36051 919 aa6.06□□□□□ -1.44
RPB4YJL140W NMD2P38798 1089 aaKnown RBP6.06□□□□□ -1.44
RPB4YJL140W YIR042CP40586 236 aa6.06□□□□□ -1.44
RPB4YJL140W VPS62P53285 467 aa6.06□□□□□ -1.44
RPB4YJL140W RMD1Q03441 430 aa6.06□□□□□ -1.44
RPB4YJL140W RRP15Q06511 250 aaPredicted RBP6.06□□□□□ -1.44
RPB4YJL140W RRI2Q12348 645 aa6.06□□□□□ -1.44
RPB4YJL140W FLO1P32768 1537 aa6.05□□□□□ -1.44
RPB4YJL140W CDC60P26637 1090 aaKnown RBP6.05□□□□□ -1.44
RPB4YJL140W ALG3P38179 458 aa6.05□□□□□ -1.44
RPB4YJL140W CCZ1P38273 704 aa6.05□□□□□ -1.44
RPB4YJL140W ACA1P39970 489 aa6.05□□□□□ -1.44
RPB4YJL140W UBP3Q01477 912 aaKnown RBP RIP-Chip data6.05□□□□□ -1.44not detected
RPB4YJL140W HOS3Q02959 697 aaKnown RBP6.05□□□□□ -1.44
RPB4YJL140W NKP2Q06162 153 aa6.05□□□□□ -1.44
RPB4YJL140W ESF1Q06344 628 aaKnown RBP6.05□□□□□ -1.44
RPB4YJL140W TY3A-GQ12173 290 aa6.05□□□□□ -1.44
RPB4YJL140W TY3A-IQ99219 290 aa6.05□□□□□ -1.44
RPB4YJL140W DED1P06634 604 aaKnown RBP6.04□□□□□ -1.44
RPB4YJL140W SNF3P10870 884 aa6.04□□□□□ -1.44
RPB4YJL140W GCD7P32502 381 aaPredicted RBP6.04□□□□□ -1.44
RPB4YJL140W TSA1P34760 196 aaKnown RBP6.04□□□□□ -1.44
RPB4YJL140W BAP2P38084 609 aa6.04□□□□□ -1.44
RPB4YJL140W YBL028CP38202 106 aa6.04□□□□□ -1.44
RPB4YJL140W RPN3P40016 523 aaKnown RBP6.04□□□□□ -1.44
RPB4YJL140W LYS14P40971 790 aa6.04□□□□□ -1.44
RPB4YJL140W TNA1P53322 534 aa6.04□□□□□ -1.44
RPB4YJL140W YVH1Q02256 364 aaKnown RBP6.04□□□□□ -1.44
RPB4YJL140W INM2Q05533 292 aa6.04□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms