RNA–Protein interactions for RNA: YIL035C

CKA1, Transcript of Alpha catalytic subunit of casein kinase 2 (CK2), yeast

Gene CKA1, Length 1,119 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CKA1	YIL035C	SDP1	P40479	209 aa		5.05	□□□□□ -1.6
CKA1	YIL035C	YIL108W	P40483	696 aa	Known RBP	5.05	□□□□□ -1.6
CKA1	YIL035C	HDA1	P53973	706 aa		5.05	□□□□□ -1.6
CKA1	YIL035C	EAF1	Q06337	982 aa		5.05	□□□□□ -1.6
CKA1	YIL035C	YLR040C	Q07988	224 aa		5.05	□□□□□ -1.6
CKA1	YIL035C	RAD4	P14736	754 aa		5.04	□□□□□ -1.6
CKA1	YIL035C	MSD1	P15179	658 aa	Known RBP	5.04	□□□□□ -1.6
CKA1	YIL035C	RAD53	P22216	821 aa		5.04	□□□□□ -1.6
CKA1	YIL035C	RFA1	P22336	621 aa	Known RBP	5.04	□□□□□ -1.6
CKA1	YIL035C	SEC21	P32074	935 aa	Known RBP	5.04	□□□□□ -1.6
CKA1	YIL035C	CDC11	P32458	415 aa		5.04	□□□□□ -1.6
CKA1	YIL035C	PET10	P36139	283 aa		5.04	□□□□□ -1.6
CKA1	YIL035C	ERP6	P53198	216 aa		5.04	□□□□□ -1.6
CKA1	YIL035C	YKR011C	Q02209	353 aa		5.04	□□□□□ -1.6
CKA1	YIL035C	HBN1	Q96VH4	193 aa		5.04	□□□□□ -1.6
CKA1	YIL035C	TRP4	P07285	380 aa	Predicted RBP	5.03	□□□□□ -1.6
CKA1	YIL035C	TOP3	P13099	656 aa		5.03	□□□□□ -1.6
CKA1	YIL035C	URA1	P28272	314 aa	Predicted RBP	5.03	□□□□□ -1.6
CKA1	YIL035C	TYE7	P33122	291 aa	Predicted RBP	5.03	□□□□□ -1.6
CKA1	YIL035C	CEP3	P40969	608 aa		5.03	□□□□□ -1.6
CKA1	YIL035C	ERG5	P54781	538 aa		5.03	□□□□□ -1.6
CKA1	YIL035C	VPS30	Q02948	557 aa		5.03	□□□□□ -1.6
CKA1	YIL035C	SPO75	Q07798	868 aa		5.03	□□□□□ -1.6
CKA1	YIL035C	CTF8	P38877	133 aa		5.02	□□□□□ -1.61
CKA1	YIL035C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	5.02	□□□□□ -1.61	not detected
CKA1	YIL035C	YOL073C	Q08232	322 aa		5.02	□□□□□ -1.61
CKA1	YIL035C	ENV7	Q12003	364 aa		5.02	□□□□□ -1.61
CKA1	YIL035C	TRM13	Q12383	476 aa		5.02	□□□□□ -1.61
CKA1	YIL035C	TUB3	P09734	445 aa	Known RBP	5.01	□□□□□ -1.61
CKA1	YIL035C	ARE1	P25628	610 aa		5.01	□□□□□ -1.61
CKA1	YIL035C	ERG4	P25340	473 aa		5	□□□□□ -1.61
CKA1	YIL035C	KTR4	P38131	464 aa		5	□□□□□ -1.61
CKA1	YIL035C	MOH1	P38191	138 aa		5	□□□□□ -1.61
CKA1	YIL035C	SUL1	P38359	859 aa		5	□□□□□ -1.61
CKA1	YIL035C	PEX19	Q07418	342 aa		5	□□□□□ -1.61
CKA1	YIL035C	OSH2	Q12451	1283 aa		5	□□□□□ -1.61
CKA1	YIL035C	MPH2	P0CD99	609 aa		4.99	□□□□□ -1.61
CKA1	YIL035C	HSP60	P19882	572 aa	Known RBP	4.99	□□□□□ -1.61
CKA1	YIL035C	OAR1	P35731	278 aa		4.99	□□□□□ -1.61
CKA1	YIL035C	YHR020W	P38708	688 aa	Known RBP	4.99	□□□□□ -1.61
CKA1	YIL035C	TIM54	P47045	478 aa		4.99	□□□□□ -1.61
CKA1	YIL035C	PPM2	Q08282	695 aa		4.99	□□□□□ -1.61
CKA1	YIL035C	CIT1	P00890	479 aa		4.98	□□□□□ -1.61
CKA1	YIL035C	PRP4	P20053	465 aa	Known RBP	4.98	□□□□□ -1.61
CKA1	YIL035C	CTF13	P35203	478 aa		4.98	□□□□□ -1.61
CKA1	YIL035C	TAF8	Q03750	510 aa		4.98	□□□□□ -1.61
CKA1	YIL035C	RPS9A	O13516	197 aa	Known RBP	4.97	□□□□□ -1.61
CKA1	YIL035C	YHR078W	P38799	552 aa		4.97	□□□□□ -1.61
CKA1	YIL035C	UBP6	P43593	499 aa	Known RBP	4.97	□□□□□ -1.61
CKA1	YIL035C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.97	□□□□□ -1.61	not detected
CKA1	YIL035C	NOP7	P53261	605 aa	Known RBP	4.97	□□□□□ -1.61
CKA1	YIL035C	YGR125W	P53273	1036 aa		4.97	□□□□□ -1.61
CKA1	YIL035C	SWM1	Q12379	170 aa		4.97	□□□□□ -1.61
CKA1	YIL035C	SCT1	P32784	759 aa		4.96	□□□□□ -1.62
CKA1	YIL035C	RNT1	Q02555	471 aa		4.96	□□□□□ -1.62
CKA1	YIL035C	HAL9	Q12180	1030 aa		4.96	□□□□□ -1.62
CKA1	YIL035C	TRM11	Q12463	433 aa		4.96	□□□□□ -1.62
CKA1	YIL035C	BET3	P36149	193 aa		4.95	□□□□□ -1.62
CKA1	YIL035C	GYP8	P43570	497 aa		4.95	□□□□□ -1.62
CKA1	YIL035C	YJL049W	P47048	450 aa		4.95	□□□□□ -1.62
CKA1	YIL035C	PUS2	P53167	370 aa		4.95	□□□□□ -1.62
CKA1	YIL035C	MRPS35	P53292	345 aa		4.95	□□□□□ -1.62
CKA1	YIL035C	NOG2	P53742	486 aa	Known RBP	4.95	□□□□□ -1.62
CKA1	YIL035C	DUS1	P53759	423 aa	Known RBP	4.95	□□□□□ -1.62
CKA1	YIL035C	YDL124W	Q07551	312 aa	Known RBP	4.95	□□□□□ -1.62
CKA1	YIL035C	FLC1	Q08967	793 aa		4.95	□□□□□ -1.62
CKA1	YIL035C	ALG7	P07286	448 aa		4.94	□□□□□ -1.62
CKA1	YIL035C	CYS3	P31373	394 aa	Known RBP	4.94	□□□□□ -1.62
CKA1	YIL035C	EMC3	P36039	253 aa		4.94	□□□□□ -1.62
CKA1	YIL035C	NIT3	P49954	291 aa		4.94	□□□□□ -1.62
CKA1	YIL035C	RTA1	P53047	317 aa		4.94	□□□□□ -1.62
CKA1	YIL035C	HUL5	P53119	910 aa		4.94	□□□□□ -1.62
CKA1	YIL035C	ASI2	P53895	289 aa		4.94	□□□□□ -1.62
CKA1	YIL035C	YOR022C	Q12204	715 aa		4.94	□□□□□ -1.62
CKA1	YIL035C	PPR1	P07272	904 aa	Predicted RBP	4.93	□□□□□ -1.62
CKA1	YIL035C	DAL7	P21826	554 aa		4.93	□□□□□ -1.62
CKA1	YIL035C	YCL002C	P25565	263 aa		4.93	□□□□□ -1.62
CKA1	YIL035C	VHR1	P40522	640 aa		4.93	□□□□□ -1.62
CKA1	YIL035C	HUL4	P40985	892 aa		4.93	□□□□□ -1.62
CKA1	YIL035C	TAD1	P53065	400 aa		4.93	□□□□□ -1.62
CKA1	YIL035C	YGR283C	P53336	341 aa	Predicted RBP	4.93	□□□□□ -1.62
CKA1	YIL035C	MUK1	Q02866	612 aa		4.93	□□□□□ -1.62
CKA1	YIL035C	YMR206W	Q03695	313 aa		4.93	□□□□□ -1.62
CKA1	YIL035C	LRS4	Q04087	347 aa	Known RBP	4.93	□□□□□ -1.62
CKA1	YIL035C	OMS1	Q06668	471 aa		4.93	□□□□□ -1.62
CKA1	YIL035C	TOM70	P07213	617 aa	Known RBP	4.92	□□□□□ -1.62
CKA1	YIL035C	RPP1	P38786	293 aa		4.92	□□□□□ -1.62
CKA1	YIL035C	FKH2	P41813	862 aa		4.92	□□□□□ -1.62
CKA1	YIL035C	STB4	P50104	949 aa		4.92	□□□□□ -1.62
CKA1	YIL035C	UBA2	P52488	636 aa		4.92	□□□□□ -1.62
CKA1	YIL035C	BDF2	Q07442	638 aa		4.92	□□□□□ -1.62
CKA1	YIL035C	CAN1	P04817	590 aa		4.91	□□□□□ -1.62
CKA1	YIL035C	RSP5	P39940	809 aa	Known RBP	4.91	□□□□□ -1.62
CKA1	YIL035C	ELO3	P40319	345 aa		4.91	□□□□□ -1.62
CKA1	YIL035C	MUS81	Q04149	632 aa	Predicted RBP	4.91	□□□□□ -1.62
CKA1	YIL035C	TMN2	Q04562	672 aa		4.91	□□□□□ -1.62
CKA1	YIL035C	MCH5	Q08777	521 aa		4.91	□□□□□ -1.62
CKA1	YIL035C	FRE5	Q08908	694 aa		4.91	□□□□□ -1.62
CKA1	YIL035C	MET3	P08536	511 aa		4.9	□□□□□ -1.63
CKA1	YIL035C	ALG2	P43636	503 aa		4.9	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 52.7 ms