RNA–Protein interactions for RNA: YIL008W

URM1, Transcript of Ubiquitin-like protein involved in thiolation of cytoplasmic tRNAs, yeastyeast

Gene URM1, Length 300 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
URM1YIL008W STE14P32584 239 aa3.32□□□□□ -1.88
URM1YIL008W HUL4P40985 892 aa3.32□□□□□ -1.88
URM1YIL008W SUN4P53616 420 aa3.32□□□□□ -1.88
URM1YIL008W NPL3Q01560 414 aaKnown RBP RIP-Chip data3.32□□□□□ -1.88 RIP-Chip
URM1YIL008W CAD1P24813 409 aaKnown RBP3.31□□□□□ -1.88
URM1YIL008W TYE7P33122 291 aaPredicted RBP3.31□□□□□ -1.88
URM1YIL008W YIL108WP40483 696 aaKnown RBP3.31□□□□□ -1.88
URM1YIL008W AIM21P40563 679 aa3.31□□□□□ -1.88
URM1YIL008W CEP3P40969 608 aa3.31□□□□□ -1.88
URM1YIL008W NNF1P47149 201 aa3.31□□□□□ -1.88
URM1YIL008W YKR011CQ02209 353 aa3.31□□□□□ -1.88
URM1YIL008W YDL124WQ07551 312 aaKnown RBP3.31□□□□□ -1.88
URM1YIL008W AIM39Q08223 395 aa3.31□□□□□ -1.88
URM1YIL008W FLC1Q08967 793 aa3.31□□□□□ -1.88
URM1YIL008W LAS17Q12446 633 aa3.31□□□□□ -1.88
URM1YIL008W MPH2P0CD99 609 aa3.3□□□□□ -1.88
URM1YIL008W TOP3P13099 656 aa3.3□□□□□ -1.88
URM1YIL008W URA1P28272 314 aaPredicted RBP3.3□□□□□ -1.88
URM1YIL008W HRR25P29295 494 aaKnown RBP3.3□□□□□ -1.88
URM1YIL008W YHR020WP38708 688 aaKnown RBP3.3□□□□□ -1.88
URM1YIL008W MSS4P38994 779 aa3.3□□□□□ -1.88
URM1YIL008W SDP1P40479 209 aa3.3□□□□□ -1.88
URM1YIL008W UBP6P43593 499 aaKnown RBP3.3□□□□□ -1.88
URM1YIL008W HUL5P53119 910 aa3.3□□□□□ -1.88
URM1YIL008W HDA1P53973 706 aa3.3□□□□□ -1.88
URM1YIL008W TAF8Q03750 510 aa3.3□□□□□ -1.88
URM1YIL008W ENV7Q12003 364 aa3.3□□□□□ -1.88
URM1YIL008W RPS9AO13516 197 aaKnown RBP3.29□□□□□ -1.88
URM1YIL008W GGA2P38817 585 aaKnown RBP3.29□□□□□ -1.88
URM1YIL008W RSP5P39940 809 aaKnown RBP3.29□□□□□ -1.88
URM1YIL008W JSN1P47135 1091 aaKnown RBP RIP-Chip data3.29□□□□□ -1.88not detected
URM1YIL008W NIT3P49954 291 aa3.29□□□□□ -1.88
URM1YIL008W KIN4Q01919 800 aa3.29□□□□□ -1.88
URM1YIL008W STI1P15705 589 aaKnown RBP RIP-Chip data3.28□□□□□ -1.88not detected
URM1YIL008W EFT1P32324 842 aaKnown RBP3.28□□□□□ -1.88
URM1YIL008W CTF8P38877 133 aa3.28□□□□□ -1.88
URM1YIL008W SLI1P53304 468 aa3.28□□□□□ -1.88
URM1YIL008W NOG2P53742 486 aaKnown RBP3.28□□□□□ -1.88
URM1YIL008W CTF4Q01454 927 aa3.28□□□□□ -1.88
URM1YIL008W SLU7Q02775 382 aaKnown RBP3.28□□□□□ -1.88
URM1YIL008W NSE3Q05541 303 aa3.28□□□□□ -1.88
URM1YIL008W PEX19Q07418 342 aa3.28□□□□□ -1.88
URM1YIL008W BDF2Q07442 638 aa3.28□□□□□ -1.88
URM1YIL008W CAN1P04817 590 aa3.27□□□□□ -1.89
URM1YIL008W TOM70P07213 617 aaKnown RBP3.27□□□□□ -1.89
URM1YIL008W TRP4P07285 380 aaPredicted RBP3.27□□□□□ -1.89
URM1YIL008W CYS3P31373 394 aaKnown RBP3.27□□□□□ -1.89
URM1YIL008W SEC21P32074 935 aaKnown RBP3.27□□□□□ -1.89
URM1YIL008W EMC3P36039 253 aa3.27□□□□□ -1.89
URM1YIL008W BET3P36149 193 aa3.27□□□□□ -1.89
URM1YIL008W CHS7P38843 316 aa3.27□□□□□ -1.89
URM1YIL008W PUS2P53167 370 aa3.27□□□□□ -1.89
URM1YIL008W DAM1P53267 343 aa3.27□□□□□ -1.89
URM1YIL008W YGR283CP53336 341 aaPredicted RBP3.27□□□□□ -1.89
URM1YIL008W CDC53Q12018 815 aaKnown RBP3.27□□□□□ -1.89
URM1YIL008W SWM1Q12379 170 aa3.27□□□□□ -1.89
URM1YIL008W GAL11P19659 1081 aa3.26□□□□□ -1.89
URM1YIL008W DAL7P21826 554 aa3.26□□□□□ -1.89
URM1YIL008W KTR4P38131 464 aa3.26□□□□□ -1.89
URM1YIL008W YHR078WP38799 552 aa3.26□□□□□ -1.89
URM1YIL008W BUL1P48524 976 aa3.26□□□□□ -1.89
URM1YIL008W RTA1P53047 317 aa3.26□□□□□ -1.89
URM1YIL008W YOL098CQ12496 1037 aa3.26□□□□□ -1.89
URM1YIL008W TUB3P09734 445 aaKnown RBP3.25□□□□□ -1.89
URM1YIL008W ERG4P25340 473 aa3.25□□□□□ -1.89
URM1YIL008W CTF13P35203 478 aa3.25□□□□□ -1.89
URM1YIL008W GYP8P43570 497 aa3.25□□□□□ -1.89
URM1YIL008W ALG2P43636 503 aa3.25□□□□□ -1.89
URM1YIL008W DUS1P53759 423 aaKnown RBP3.25□□□□□ -1.89
URM1YIL008W ERG5P54781 538 aa3.25□□□□□ -1.89
URM1YIL008W YDR514CQ04408 483 aa3.25□□□□□ -1.89
URM1YIL008W YLR040CQ07988 224 aa3.25□□□□□ -1.89
URM1YIL008W HAL9Q12180 1030 aa3.25□□□□□ -1.89
URM1YIL008W TRM11Q12463 433 aa3.25□□□□□ -1.89
URM1YIL008W YOR131CQ12486 218 aa3.25□□□□□ -1.89
URM1YIL008W PHR1P05066 565 aaKnown RBP RIP-Chip data3.24□□□□□ -1.89not detected
URM1YIL008W SRP40P32583 406 aaPredicted RBP3.24□□□□□ -1.89
URM1YIL008W SUL1P38359 859 aa3.24□□□□□ -1.89
URM1YIL008W CHZ1P40019 153 aaPredicted RBP3.24□□□□□ -1.89
URM1YIL008W TAD1P53065 400 aa3.24□□□□□ -1.89
URM1YIL008W LRS4Q04087 347 aaKnown RBP3.24□□□□□ -1.89
URM1YIL008W REH1Q06709 432 aa3.24□□□□□ -1.89
URM1YIL008W YOL073CQ08232 322 aa3.24□□□□□ -1.89
URM1YIL008W YOR022CQ12204 715 aa3.24□□□□□ -1.89
URM1YIL008W PRC1P00729 532 aa3.23□□□□□ -1.89
URM1YIL008W YCL002CP25565 263 aa3.23□□□□□ -1.89
URM1YIL008W SPC29P33419 253 aa3.23□□□□□ -1.89
URM1YIL008W SAP190P36123 1033 aa3.23□□□□□ -1.89
URM1YIL008W PZF1P39933 429 aa3.23□□□□□ -1.89
URM1YIL008W VHR1P40522 640 aa3.23□□□□□ -1.89
URM1YIL008W ASI2P53895 289 aa3.23□□□□□ -1.89
URM1YIL008W RNT1Q02555 471 aa3.23□□□□□ -1.89
URM1YIL008W ATP25Q03153 612 aa3.23□□□□□ -1.89
URM1YIL008W ALG7P07286 448 aa3.22□□□□□ -1.89
URM1YIL008W PRP4P20053 465 aaKnown RBP3.22□□□□□ -1.89
URM1YIL008W OCA5P38738 679 aa3.22□□□□□ -1.89
URM1YIL008W RPP1P38786 293 aa3.22□□□□□ -1.89
URM1YIL008W SET5P38890 526 aaKnown RBP3.22□□□□□ -1.89
URM1YIL008W SAK1P38990 1142 aa3.22□□□□□ -1.89
URM1YIL008W SSY5P47002 699 aa3.22□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 10.5 ms