RNA–Protein interactions for RNA: YHR139C

SPS100, Transcript of Protein required for spore wall maturation, yeast

Gene SPS100, Length 981 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPS100	YHR139C	MUD1	P32605	298 aa	Known RBP	9.47	□□□□□ -0.89
SPS100	YHR139C	MIP6	P38760	659 aa	Known RBP	9.47	□□□□□ -0.89
SPS100	YHR139C	FYV8	P46949	817 aa	Known RBP	9.47	□□□□□ -0.89
SPS100	YHR139C	ORC5	P50874	479 aa		9.47	□□□□□ -0.89
SPS100	YHR139C	MUK1	Q02866	612 aa		9.47	□□□□□ -0.89
SPS100	YHR139C	GIR2	Q03768	265 aa	Predicted RBP	9.47	□□□□□ -0.89
SPS100	YHR139C	RLP24	Q07915	199 aa	Known RBP	9.47	□□□□□ -0.89
SPS100	YHR139C	LDB19	Q12502	818 aa		9.47	□□□□□ -0.89
SPS100	YHR139C	SWI6	P09959	803 aa		9.46	□□□□□ -0.9
SPS100	YHR139C	APL1	P27351	700 aa		9.46	□□□□□ -0.9
SPS100	YHR139C	POT1	P27796	417 aa	Known RBP RIP-Chip data	9.46	□□□□□ -0.9	not detected
SPS100	YHR139C	SKG6	P32900	734 aa	Predicted RBP	9.46	□□□□□ -0.9
SPS100	YHR139C	MPE1	P35728	441 aa	Known RBP	9.46	□□□□□ -0.9
SPS100	YHR139C	FIR1	P40020	876 aa		9.46	□□□□□ -0.9
SPS100	YHR139C	YFL040W	P43562	540 aa		9.46	□□□□□ -0.9
SPS100	YHR139C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	9.46	□□□□□ -0.9	not detected
SPS100	YHR139C	HSH155	P49955	971 aa	Known RBP	9.46	□□□□□ -0.9
SPS100	YHR139C	TIM8	P57744	87 aa		9.46	□□□□□ -0.9
SPS100	YHR139C	TRS130	Q03660	1102 aa		9.46	□□□□□ -0.9
SPS100	YHR139C	DON1	Q05610	365 aa		9.46	□□□□□ -0.9
SPS100	YHR139C	FAL1	Q12099	399 aa	Known RBP	9.46	□□□□□ -0.9
SPS100	YHR139C	RPS6A	P0CX37	236 aa	Known RBP	9.45	□□□□□ -0.9
SPS100	YHR139C	RPS6B	P0CX38	236 aa	Predicted RBP	9.45	□□□□□ -0.9
SPS100	YHR139C	VMA1	P17255	1071 aa	Known RBP	9.45	□□□□□ -0.9
SPS100	YHR139C	FUB1	P25659	250 aa		9.45	□□□□□ -0.9
SPS100	YHR139C	DRE2	P36152	348 aa		9.45	□□□□□ -0.9
SPS100	YHR139C	SHM1	P37292	490 aa	Predicted RBP	9.45	□□□□□ -0.9
SPS100	YHR139C	MRX3	P38172	270 aa		9.45	□□□□□ -0.9
SPS100	YHR139C	NPP2	P39997	493 aa		9.45	□□□□□ -0.9
SPS100	YHR139C	ASN1	P49089	572 aa	Known RBP	9.45	□□□□□ -0.9
SPS100	YHR139C	YNL115C	P53925	644 aa		9.45	□□□□□ -0.9
SPS100	YHR139C	SHS1	Q07657	551 aa		9.45	□□□□□ -0.9
SPS100	YHR139C	ZPS1	Q12512	249 aa		9.45	□□□□□ -0.9
SPS100	YHR139C	SSB1	P11484	613 aa	Known RBP	9.44	□□□□□ -0.9
SPS100	YHR139C	ADE2	P21264	571 aa	Known RBP	9.44	□□□□□ -0.9
SPS100	YHR139C	SPO11	P23179	398 aa		9.44	□□□□□ -0.9
SPS100	YHR139C	SEC65	P29478	273 aa		9.44	□□□□□ -0.9
SPS100	YHR139C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	9.44	□□□□□ -0.9	not detected
SPS100	YHR139C	GRS1	P38088	690 aa	Known RBP	9.44	□□□□□ -0.9
SPS100	YHR139C	MMS4	P38257	691 aa		9.44	□□□□□ -0.9
SPS100	YHR139C	EFM2	P38347	419 aa		9.44	□□□□□ -0.9
SPS100	YHR139C	SSB2	P40150	613 aa	Known RBP	9.44	□□□□□ -0.9
SPS100	YHR139C	DOT1	Q04089	582 aa	Known RBP	9.44	□□□□□ -0.9
SPS100	YHR139C	CWC2	Q12046	339 aa	Predicted RBP	9.44	□□□□□ -0.9
SPS100	YHR139C	MCM2	P29469	868 aa		9.43	□□□□□ -0.9
SPS100	YHR139C	BUD2	P33314	1104 aa		9.43	□□□□□ -0.9
SPS100	YHR139C	WHI3	P34761	661 aa	Known RBP	9.43	□□□□□ -0.9
SPS100	YHR139C	MAC1	P35192	417 aa		9.43	□□□□□ -0.9
SPS100	YHR139C	FIG4	P42837	879 aa		9.43	□□□□□ -0.9
SPS100	YHR139C	COS5	P47187	383 aa		9.43	□□□□□ -0.9
SPS100	YHR139C	VPS75	P53853	264 aa		9.43	□□□□□ -0.9
SPS100	YHR139C	YNL134C	P53912	376 aa	Known RBP	9.43	□□□□□ -0.9
SPS100	YHR139C	PCD1	Q12524	340 aa		9.43	□□□□□ -0.9
SPS100	YHR139C	COX4	P04037	155 aa		9.42	□□□□□ -0.9
SPS100	YHR139C	ADE4	P04046	510 aa	Known RBP	9.42	□□□□□ -0.9
SPS100	YHR139C	TOM70	P07213	617 aa	Known RBP	9.42	□□□□□ -0.9
SPS100	YHR139C	GLN3	P18494	730 aa		9.42	□□□□□ -0.9
SPS100	YHR139C	PHO13	P19881	312 aa		9.42	□□□□□ -0.9
SPS100	YHR139C	LEO1	P38439	464 aa		9.42	□□□□□ -0.9
SPS100	YHR139C	LAM5	P43560	674 aa		9.42	□□□□□ -0.9
SPS100	YHR139C	GCV2	P49095	1034 aa		9.42	□□□□□ -0.9
SPS100	YHR139C	YLR297W	Q05899	129 aa		9.42	□□□□□ -0.9
SPS100	YHR139C	SLX4	Q12098	748 aa		9.42	□□□□□ -0.9
SPS100	YHR139C	YKL023W	P36103	277 aa	Known RBP	9.41	□□□□□ -0.9
SPS100	YHR139C	UBX7	P38349	436 aa		9.41	□□□□□ -0.9
SPS100	YHR139C	BRL1	P38770	471 aa		9.41	□□□□□ -0.9
SPS100	YHR139C	YAP1801	P38856	637 aa		9.41	□□□□□ -0.9
SPS100	YHR139C	HFM1	P51979	1187 aa		9.41	□□□□□ -0.9
SPS100	YHR139C	RPL4A	P10664	362 aa	Known RBP	9.4	□□□□□ -0.9
SPS100	YHR139C	NAT1	P12945	854 aa	Known RBP	9.4	□□□□□ -0.9
SPS100	YHR139C	PRR1	P28708	518 aa		9.4	□□□□□ -0.9
SPS100	YHR139C	RPT1	P33299	467 aa	Known RBP	9.4	□□□□□ -0.9
SPS100	YHR139C	PXL1	P36166	706 aa		9.4	□□□□□ -0.9
SPS100	YHR139C	YHL026C	P38740	315 aa		9.4	□□□□□ -0.9
SPS100	YHR139C	RTT107	P38850	1070 aa		9.4	□□□□□ -0.9
SPS100	YHR139C	FTR1	P40088	404 aa		9.4	□□□□□ -0.9
SPS100	YHR139C	SPO74	P45819	413 aa		9.4	□□□□□ -0.9
SPS100	YHR139C	ISM1	P48526	1002 aa		9.4	□□□□□ -0.9
SPS100	YHR139C	RPL4B	P49626	362 aa	Known RBP	9.4	□□□□□ -0.9
SPS100	YHR139C	FOL2	P51601	243 aa	Known RBP	9.4	□□□□□ -0.9
SPS100	YHR139C	ALT2	P52892	507 aa		9.4	□□□□□ -0.9
SPS100	YHR139C	YGR035C	P53222	116 aa		9.4	□□□□□ -0.9
SPS100	YHR139C	TBF1	Q02457	562 aa		9.4	□□□□□ -0.9
SPS100	YHR139C	YLR287C	Q05881	355 aa		9.4	□□□□□ -0.9
SPS100	YHR139C	PLP2	Q12017	286 aa		9.4	□□□□□ -0.9
SPS100	YHR139C	SWI3	P32591	825 aa		9.39	□□□□□ -0.91
SPS100	YHR139C	XRS2	P33301	854 aa		9.39	□□□□□ -0.91
SPS100	YHR139C	TRM2	P33753	639 aa		9.39	□□□□□ -0.91
SPS100	YHR139C	EBP2	P36049	427 aa	Known RBP	9.39	□□□□□ -0.91
SPS100	YHR139C	POA1	P38218	177 aa		9.39	□□□□□ -0.91
SPS100	YHR139C	VFA1	P40080	203 aa		9.39	□□□□□ -0.91
SPS100	YHR139C	STR2	P47164	639 aa		9.39	□□□□□ -0.91
SPS100	YHR139C	CLA4	P48562	842 aa		9.39	□□□□□ -0.91
SPS100	YHR139C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	9.39	□□□□□ -0.91	not detected
SPS100	YHR139C	CEF1	Q03654	590 aa	Predicted RBP	9.39	□□□□□ -0.91
SPS100	YHR139C	RGA2	Q06407	1009 aa		9.39	□□□□□ -0.91
SPS100	YHR139C	CSR1	Q06705	408 aa	Known RBP	9.39	□□□□□ -0.91
SPS100	YHR139C	SGT2	Q12118	346 aa	Known RBP	9.39	□□□□□ -0.91
SPS100	YHR139C	ASP3-2	P0CX77	362 aa		9.38	□□□□□ -0.91
SPS100	YHR139C	ASP3-3	P0CX78	362 aa		9.38	□□□□□ -0.91

Retrieved 100 of 5,963 RNA–protein pairs in 200.5 ms