RNA–Protein interactions for RNA: YHL025W

SNF6, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SNF6, Length 999 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF6YHL025W DON1Q05610 365 aa12.31□□□□□ -0.44
SNF6YHL025W AHC1Q12433 566 aa12.31□□□□□ -0.44
SNF6YHL025W GPT2P36148 743 aa12.3□□□□□ -0.44
SNF6YHL025W FLR1P38124 548 aa12.3□□□□□ -0.44
SNF6YHL025W ALF1P53904 254 aa12.3□□□□□ -0.44
SNF6YHL025W YML020WQ03722 664 aa12.3□□□□□ -0.44
SNF6YHL025W MLH2Q07980 695 aa12.3□□□□□ -0.44
SNF6YHL025W IES4Q08561 116 aa12.3□□□□□ -0.44
SNF6YHL025W CDC53Q12018 815 aaKnown RBP12.3□□□□□ -0.44
SNF6YHL025W OSW2Q12202 724 aa12.3□□□□□ -0.44
SNF6YHL025W MAS2P11914 482 aa12.29□□□□□ -0.44
SNF6YHL025W CHS2P14180 963 aa12.29□□□□□ -0.44
SNF6YHL025W UBC1P21734 215 aaKnown RBP12.29□□□□□ -0.44
SNF6YHL025W SSD1P24276 1250 aaKnown RBP RIP-Chip data12.29□□□□□ -0.44not detected
SNF6YHL025W ERG5P54781 538 aa12.29□□□□□ -0.44
SNF6YHL025W TIM8P57744 87 aa12.29□□□□□ -0.44
SNF6YHL025W UME1Q03010 460 aa12.29□□□□□ -0.44
SNF6YHL025W VPS38Q05919 439 aa12.29□□□□□ -0.44
SNF6YHL025W NEW1Q08972 1196 aaKnown RBP12.29□□□□□ -0.44
SNF6YHL025W MSC7P38694 644 aa12.28□□□□□ -0.44
SNF6YHL025W YAP5P40574 245 aa12.28□□□□□ -0.44
SNF6YHL025W SKP2P42843 763 aa12.28□□□□□ -0.44
SNF6YHL025W VTC3Q02725 835 aa12.28□□□□□ -0.44
SNF6YHL025W HIF1Q12373 385 aa12.28□□□□□ -0.44
SNF6YHL025W HIP1P06775 603 aa12.27□□□□□ -0.45
SNF6YHL025W SNA3P14359 133 aa12.27□□□□□ -0.45
SNF6YHL025W DPH2P32461 534 aa12.27□□□□□ -0.45
SNF6YHL025W SMY2P32909 740 aaKnown RBP12.27□□□□□ -0.45
SNF6YHL025W PCH2P38126 564 aa12.27□□□□□ -0.45
SNF6YHL025W GUA1P38625 525 aaKnown RBP12.27□□□□□ -0.45
SNF6YHL025W SMC2P38989 1170 aaKnown RBP12.27□□□□□ -0.45
SNF6YHL025W SDS3P40505 327 aa12.27□□□□□ -0.45
SNF6YHL025W OSW7P43611 510 aa12.27□□□□□ -0.45
SNF6YHL025W SMC3P47037 1230 aa12.27□□□□□ -0.45
SNF6YHL025W JSN1P47135 1091 aaKnown RBP RIP-Chip data12.27□□□□□ -0.45not detected
SNF6YHL025W SHE10P53075 577 aa12.27□□□□□ -0.45
SNF6YHL025W YNL146WP53906 100 aa12.27□□□□□ -0.45
SNF6YHL025W YLR297WQ05899 129 aa12.27□□□□□ -0.45
SNF6YHL025W YPR078CQ06813 372 aa12.27□□□□□ -0.45
SNF6YHL025W HFI1Q12060 488 aa12.27□□□□□ -0.45
SNF6YHL025W PPR1P07272 904 aaPredicted RBP12.26□□□□□ -0.45
SNF6YHL025W SPO12P17123 173 aa12.26□□□□□ -0.45
SNF6YHL025W VMA1P17255 1071 aaKnown RBP12.26□□□□□ -0.45
SNF6YHL025W RRP43P25359 394 aaPredicted RBP12.26□□□□□ -0.45
SNF6YHL025W MUD1P32605 298 aaKnown RBP12.26□□□□□ -0.45
SNF6YHL025W ATG3P40344 310 aa12.26□□□□□ -0.45
SNF6YHL025W SHQ1P40486 507 aaPredicted RBP12.26□□□□□ -0.45
SNF6YHL025W CUL3P53202 744 aa12.26□□□□□ -0.45
SNF6YHL025W MSC2Q03455 724 aa12.26□□□□□ -0.45
SNF6YHL025W UTP5Q04177 643 aaKnown RBP12.26□□□□□ -0.45
SNF6YHL025W LDB19Q12502 818 aa12.26□□□□□ -0.45
SNF6YHL025W AFT1P22149 690 aa12.25□□□□□ -0.45
SNF6YHL025W XRS2P33301 854 aa12.25□□□□□ -0.45
SNF6YHL025W NIP100P33420 868 aa12.25□□□□□ -0.45
SNF6YHL025W AVT3P36062 692 aa12.25□□□□□ -0.45
SNF6YHL025W NPP2P39997 493 aa12.25□□□□□ -0.45
SNF6YHL025W ACF4P47129 309 aa12.25□□□□□ -0.45
SNF6YHL025W JJJ3P47138 172 aa12.25□□□□□ -0.45
SNF6YHL025W CSR1Q06705 408 aaKnown RBP12.25□□□□□ -0.45
SNF6YHL025W YMR084WA2P2R3 262 aa12.24□□□□□ -0.45
SNF6YHL025W HEM1P09950 548 aaPredicted RBP12.24□□□□□ -0.45
SNF6YHL025W SEC23P15303 768 aaKnown RBP12.24□□□□□ -0.45
SNF6YHL025W PDC6P26263 563 aaKnown RBP12.24□□□□□ -0.45
SNF6YHL025W GRS1P38088 690 aaKnown RBP12.24□□□□□ -0.45
SNF6YHL025W IES1P43579 692 aa12.24□□□□□ -0.45
SNF6YHL025W ECM7Q06200 448 aa12.24□□□□□ -0.45
SNF6YHL025W OPY2Q06810 360 aa12.24□□□□□ -0.45
SNF6YHL025W ATG11Q12527 1178 aa12.24□□□□□ -0.45
SNF6YHL025W MTF2P10849 440 aa12.23□□□□□ -0.45
SNF6YHL025W TUP1P16649 713 aa12.23□□□□□ -0.45
SNF6YHL025W SMC1P32908 1225 aa12.23□□□□□ -0.45
SNF6YHL025W YKL023WP36103 277 aaKnown RBP12.23□□□□□ -0.45
SNF6YHL025W DAK1P54838 584 aaKnown RBP12.23□□□□□ -0.45
SNF6YHL025W UTP14Q04500 899 aaKnown RBP12.23□□□□□ -0.45
SNF6YHL025W YOL098CQ12496 1037 aa12.23□□□□□ -0.45
SNF6YHL025W YDR524C-BQ3E6R4 66 aa12.23□□□□□ -0.45
SNF6YHL025W TMT1P32643 299 aa12.22□□□□□ -0.45
SNF6YHL025W CCC2P38995 1004 aa12.22□□□□□ -0.45
SNF6YHL025W CAJ1P39101 391 aa12.22□□□□□ -0.45
SNF6YHL025W ASN1P49089 572 aaKnown RBP12.22□□□□□ -0.45
SNF6YHL025W HSH155P49955 971 aaKnown RBP12.22□□□□□ -0.45
SNF6YHL025W ENV11P53246 860 aa12.22□□□□□ -0.45
SNF6YHL025W ESBP6P53918 673 aa12.22□□□□□ -0.45
SNF6YHL025W YDR090CQ03193 310 aa12.22□□□□□ -0.45
SNF6YHL025W YDR034W-BQ6Q5X2 51 aa12.22□□□□□ -0.45
SNF6YHL025W PIN4P34217 668 aaKnown RBP RIP-Chip data12.21□□□□□ -0.45not detected
SNF6YHL025W ORC5P50874 479 aa12.21□□□□□ -0.45
SNF6YHL025W TAD1P53065 400 aa12.21□□□□□ -0.45
SNF6YHL025W RTP1Q12751 981 aa12.21□□□□□ -0.45
SNF6YHL025W MSS51P32335 436 aa12.2□□□□□ -0.46
SNF6YHL025W STO1P34160 861 aaKnown RBP12.2□□□□□ -0.46
SNF6YHL025W MCX1P38323 520 aaPredicted RBP12.2□□□□□ -0.46
SNF6YHL025W SCD6P45978 349 aaKnown RBP RIP-Chip data12.2□□□□□ -0.46not detected
SNF6YHL025W APT1P49435 187 aaKnown RBP12.2□□□□□ -0.46
SNF6YHL025W MNP1P53163 194 aaPredicted RBP12.2□□□□□ -0.46
SNF6YHL025W CUS1Q02554 436 aaPredicted RBP12.2□□□□□ -0.46
SNF6YHL025W YDL206WQ12424 762 aa12.2□□□□□ -0.46
SNF6YHL025W WHI2P12611 486 aa12.19□□□□□ -0.46
SNF6YHL025W KIP1P28742 1111 aa12.19□□□□□ -0.46
SNF6YHL025W RAD54P32863 898 aa12.19□□□□□ -0.46
Retrieved 100 of 5,963 RNA–protein pairs in 57.1 ms