RNA–Protein interactions for RNA: YGR171C

MSM1, Transcript of Mitochondrial methionyl-tRNA synthetase (MetRS), yeastyeast

Gene MSM1, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSM1YGR171C STO1P34160 861 aaKnown RBP4.41□□□□□ -1.7
MSM1YGR171C ZRG8P40021 1076 aa4.41□□□□□ -1.7
MSM1YGR171C CEP3P40969 608 aa4.41□□□□□ -1.7
MSM1YGR171C JSN1P47135 1091 aaKnown RBP RIP-Chip data4.41□□□□□ -1.7not detected
MSM1YGR171C YGR012WP53206 393 aa4.41□□□□□ -1.7
MSM1YGR171C NOG2P53742 486 aaKnown RBP4.41□□□□□ -1.7
MSM1YGR171C ALO1P54783 526 aaKnown RBP4.41□□□□□ -1.7
MSM1YGR171C ENA2Q01896 1091 aa4.41□□□□□ -1.7
MSM1YGR171C UME1Q03010 460 aa4.41□□□□□ -1.7
MSM1YGR171C BRE4Q07660 1125 aa4.41□□□□□ -1.7
MSM1YGR171C YLR001CQ07895 862 aa4.41□□□□□ -1.7
MSM1YGR171C VTS1Q08831 523 aaKnown RBP RIP-Chip data4.41□□□□□ -1.7not detected
MSM1YGR171C ENA5Q12691 1091 aa4.41□□□□□ -1.7
MSM1YGR171C RPS9AO13516 197 aaKnown RBP4.41□□□□□ -1.7
MSM1YGR171C HSF1P10961 833 aa4.41□□□□□ -1.7
MSM1YGR171C DAL7P21826 554 aa4.41□□□□□ -1.7
MSM1YGR171C URA1P28272 314 aaPredicted RBP4.41□□□□□ -1.7
MSM1YGR171C PUB1P32588 453 aaKnown RBP RIP-Chip data4.41□□□□□ -1.7not detected
MSM1YGR171C LIP5P32875 414 aa4.41□□□□□ -1.7
MSM1YGR171C CAF16P43569 289 aa4.41□□□□□ -1.7
MSM1YGR171C RAI1P53063 387 aaKnown RBP4.41□□□□□ -1.7
MSM1YGR171C TAD1P53065 400 aa4.41□□□□□ -1.7
MSM1YGR171C TMA17Q12513 150 aa4.41□□□□□ -1.7
MSM1YGR171C RAD18P10862 487 aa4.4□□□□□ -1.71
MSM1YGR171C PER1P25625 357 aa4.4□□□□□ -1.71
MSM1YGR171C STE13P33894 931 aa4.4□□□□□ -1.71
MSM1YGR171C YEL1P34225 687 aa4.4□□□□□ -1.71
MSM1YGR171C ETP1P38748 585 aaKnown RBP4.4□□□□□ -1.71
MSM1YGR171C TPM2P40414 161 aa4.4□□□□□ -1.71
MSM1YGR171C TY4A-JP47023 414 aa4.4□□□□□ -1.71
MSM1YGR171C PSP2P50109 593 aaKnown RBP4.4□□□□□ -1.71
MSM1YGR171C YOR352WQ08816 343 aa4.4□□□□□ -1.71
MSM1YGR171C FAP7Q12055 197 aaPredicted RBP4.4□□□□□ -1.71
MSM1YGR171C SSD1P24276 1250 aaKnown RBP RIP-Chip data4.39□□□□□ -1.71not detected
MSM1YGR171C PCL2P25693 308 aa4.39□□□□□ -1.71
MSM1YGR171C TYE7P33122 291 aaPredicted RBP4.39□□□□□ -1.71
MSM1YGR171C MCD4P36051 919 aa4.39□□□□□ -1.71
MSM1YGR171C OMA1P36163 345 aa4.39□□□□□ -1.71
MSM1YGR171C CYS3P31373 394 aaKnown RBP4.38□□□□□ -1.71
MSM1YGR171C SAP190P36123 1033 aa4.38□□□□□ -1.71
MSM1YGR171C TYS1P36421 394 aaKnown RBP4.38□□□□□ -1.71
MSM1YGR171C ENP1P38333 483 aaKnown RBP4.38□□□□□ -1.71
MSM1YGR171C MGS1P40151 587 aa4.38□□□□□ -1.71
MSM1YGR171C GPG1P53130 126 aa4.38□□□□□ -1.71
MSM1YGR171C YKR011CQ02209 353 aa4.38□□□□□ -1.71
MSM1YGR171C URN1Q06525 465 aaKnown RBP4.38□□□□□ -1.71
MSM1YGR171C CDA1Q06702 301 aa4.38□□□□□ -1.71
MSM1YGR171C GAL10P04397 699 aa4.38□□□□□ -1.71
MSM1YGR171C SFL1P20134 766 aa4.38□□□□□ -1.71
MSM1YGR171C RPN10P38886 268 aaKnown RBP4.38□□□□□ -1.71
MSM1YGR171C MND2P40577 368 aa4.38□□□□□ -1.71
MSM1YGR171C ALY2P47029 1046 aa4.38□□□□□ -1.71
MSM1YGR171C CTH1P47976 325 aa4.38□□□□□ -1.71
MSM1YGR171C SNO2P53823 222 aa4.38□□□□□ -1.71
MSM1YGR171C HDA1P53973 706 aa4.38□□□□□ -1.71
MSM1YGR171C SNP1Q00916 300 aaPredicted RBP4.38□□□□□ -1.71
MSM1YGR171C LRS4Q04087 347 aaKnown RBP4.38□□□□□ -1.71
MSM1YGR171C HFD1Q04458 532 aa4.38□□□□□ -1.71
MSM1YGR171C YCL002CP25565 263 aa4.37□□□□□ -1.71
MSM1YGR171C HOG1P32485 435 aa4.37□□□□□ -1.71
MSM1YGR171C RPD3P32561 433 aa4.37□□□□□ -1.71
MSM1YGR171C ATG19P35193 415 aa4.37□□□□□ -1.71
MSM1YGR171C RLP7P40693 322 aaKnown RBP4.37□□□□□ -1.71
MSM1YGR171C SHR5P41912 237 aa4.37□□□□□ -1.71
MSM1YGR171C YJR120WP47157 116 aa4.37□□□□□ -1.71
MSM1YGR171C MET13P53128 600 aa4.37□□□□□ -1.71
MSM1YGR171C PUS2P53167 370 aa4.37□□□□□ -1.71
MSM1YGR171C PEX8P53248 589 aa4.37□□□□□ -1.71
MSM1YGR171C COG8Q04632 607 aa4.37□□□□□ -1.71
MSM1YGR171C SGD1Q06132 899 aa4.37□□□□□ -1.71
MSM1YGR171C PRC1P00729 532 aa4.36□□□□□ -1.71
MSM1YGR171C POL12P38121 705 aaPredicted RBP4.36□□□□□ -1.71
MSM1YGR171C POA1P38218 177 aa4.36□□□□□ -1.71
MSM1YGR171C YIL108WP40483 696 aaKnown RBP4.36□□□□□ -1.71
MSM1YGR171C INP52P50942 1183 aa4.36□□□□□ -1.71
MSM1YGR171C PBP1P53297 722 aaKnown RBP4.36□□□□□ -1.71
MSM1YGR171C ROT1Q03691 256 aa4.36□□□□□ -1.71
MSM1YGR171C SSL1Q04673 461 aaPredicted RBP4.36□□□□□ -1.71
MSM1YGR171C YDL177CQ12257 170 aa4.36□□□□□ -1.71
MSM1YGR171C YBR182C-AQ8TGU6 64 aa4.36□□□□□ -1.71
MSM1YGR171C DIF1O13577 133 aa4.35□□□□□ -1.71
MSM1YGR171C SPE1P08432 466 aa4.35□□□□□ -1.71
MSM1YGR171C SET5P38890 526 aaKnown RBP4.35□□□□□ -1.71
MSM1YGR171C DOT6P40059 670 aaKnown RBP4.35□□□□□ -1.71
MSM1YGR171C NIT1P40447 199 aa4.35□□□□□ -1.71
MSM1YGR171C GPP1P41277 250 aaKnown RBP4.35□□□□□ -1.71
MSM1YGR171C HXT16P47185 567 aa4.35□□□□□ -1.71
MSM1YGR171C GTF1P53260 183 aaPredicted RBP4.35□□□□□ -1.71
MSM1YGR171C MTQ2Q03920 221 aaPredicted RBP4.35□□□□□ -1.71
MSM1YGR171C NHX1Q04121 633 aa4.35□□□□□ -1.71
MSM1YGR171C DFG16Q99234 619 aa4.35□□□□□ -1.71
MSM1YGR171C RPP2AP05319 106 aaKnown RBP4.35□□□□□ -1.71
MSM1YGR171C EUG1P32474 517 aa4.35□□□□□ -1.71
MSM1YGR171C SEC6P32844 805 aa4.35□□□□□ -1.71
MSM1YGR171C PCM1P38628 557 aaKnown RBP4.35□□□□□ -1.71
MSM1YGR171C NAB3P38996 802 aaKnown RBP RIP-Chip data4.35□□□□□ -1.71not detected
MSM1YGR171C GUP2Q08929 609 aa4.35□□□□□ -1.71
MSM1YGR171C HAL9Q12180 1030 aa4.35□□□□□ -1.71
MSM1YGR171C YOR022CQ12204 715 aa4.35□□□□□ -1.71
MSM1YGR171C TMA7Q3E764 64 aaKnown RBP4.35□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms