RNA–Protein interactions for RNA: YGR136W

LSB1, Transcript of Negative regulator of actin nucleation-promoting factor activity, yeast

Gene LSB1, Length 726 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSB1	YGR136W	RRG1	Q12167	365 aa	Predicted RBP	4.82	□□□□□ -1.64
LSB1	YGR136W	GLO4	Q12320	285 aa		4.82	□□□□□ -1.64
LSB1	YGR136W	SAC3	P46674	1301 aa		4.81	□□□□□ -1.64
LSB1	YGR136W	PDR18	P53756	1333 aa		4.81	□□□□□ -1.64
LSB1	YGR136W	HVG1	P0CE11	249 aa		4.81	□□□□□ -1.64
LSB1	YGR136W	SBA1	P28707	216 aa	Known RBP	4.81	□□□□□ -1.64
LSB1	YGR136W	MRP8	P35719	219 aa		4.81	□□□□□ -1.64
LSB1	YGR136W	ARL1	P38116	183 aa	Known RBP	4.81	□□□□□ -1.64
LSB1	YGR136W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.81	□□□□□ -1.64	not detected
LSB1	YGR136W	GGA2	P38817	585 aa	Known RBP	4.81	□□□□□ -1.64
LSB1	YGR136W	RIX1	P38883	763 aa	Predicted RBP	4.81	□□□□□ -1.64
LSB1	YGR136W	FET4	P40988	552 aa		4.81	□□□□□ -1.64
LSB1	YGR136W	CRF1	Q04930	467 aa		4.81	□□□□□ -1.64
LSB1	YGR136W	SPO75	Q07798	868 aa		4.81	□□□□□ -1.64
LSB1	YGR136W	SOG2	Q08817	791 aa		4.81	□□□□□ -1.64
LSB1	YGR136W	VAS1	P07806	1104 aa	Known RBP	4.8	□□□□□ -1.64
LSB1	YGR136W	MAE1	P36013	669 aa	Known RBP	4.8	□□□□□ -1.64
LSB1	YGR136W	YKL077W	P36081	392 aa		4.8	□□□□□ -1.64
LSB1	YGR136W	RDH54	P38086	958 aa		4.8	□□□□□ -1.64
LSB1	YGR136W	ECM21	P38167	1117 aa	Known RBP	4.8	□□□□□ -1.64
LSB1	YGR136W	INP51	P40559	946 aa	Known RBP	4.8	□□□□□ -1.64
LSB1	YGR136W	VPS4	P52917	437 aa		4.8	□□□□□ -1.64
LSB1	YGR136W	MLC1	P53141	149 aa		4.8	□□□□□ -1.64
LSB1	YGR136W	BIO5	P53744	561 aa	Known RBP	4.8	□□□□□ -1.64
LSB1	YGR136W	SDH1	Q00711	640 aa		4.8	□□□□□ -1.64
LSB1	YGR136W	EEB1	Q02891	456 aa		4.8	□□□□□ -1.64
LSB1	YGR136W	IRC4	Q03036	179 aa		4.8	□□□□□ -1.64
LSB1	YGR136W	PRP42	Q03776	544 aa	Known RBP	4.8	□□□□□ -1.64
LSB1	YGR136W	POB3	Q04636	552 aa	Known RBP	4.8	□□□□□ -1.64
LSB1	YGR136W	NOP58	Q12499	511 aa	Known RBP	4.8	□□□□□ -1.64
LSB1	YGR136W	YLR278C	Q05854	1341 aa		4.79	□□□□□ -1.64
LSB1	YGR136W	NOT3	P06102	836 aa	Known RBP	4.79	□□□□□ -1.64
LSB1	YGR136W	RNR2	P09938	399 aa	Known RBP	4.79	□□□□□ -1.64
LSB1	YGR136W	HPR1	P17629	752 aa	Known RBP	4.79	□□□□□ -1.64
LSB1	YGR136W	SEC18	P18759	758 aa	Known RBP	4.79	□□□□□ -1.64
LSB1	YGR136W	LCB1	P25045	558 aa	Known RBP	4.79	□□□□□ -1.64
LSB1	YGR136W	MSH3	P25336	1018 aa		4.79	□□□□□ -1.64
LSB1	YGR136W	LYP1	P32487	611 aa		4.79	□□□□□ -1.64
LSB1	YGR136W	VPS24	P36095	224 aa	Known RBP	4.79	□□□□□ -1.64
LSB1	YGR136W	TIM54	P47045	478 aa		4.79	□□□□□ -1.64
LSB1	YGR136W	HUL5	P53119	910 aa		4.79	□□□□□ -1.64
LSB1	YGR136W	TYW3	P53177	273 aa		4.79	□□□□□ -1.64
LSB1	YGR136W	ENV11	P53246	860 aa		4.79	□□□□□ -1.64
LSB1	YGR136W	TIM50	Q02776	476 aa		4.79	□□□□□ -1.64
LSB1	YGR136W	HDA2	Q06629	674 aa		4.79	□□□□□ -1.64
LSB1	YGR136W	BRE1	Q07457	700 aa	Known RBP	4.79	□□□□□ -1.64
LSB1	YGR136W	YLR125W	Q12138	136 aa		4.79	□□□□□ -1.64
LSB1	YGR136W	LSP1	Q12230	341 aa	Known RBP	4.79	□□□□□ -1.64
LSB1	YGR136W	RRI2	Q12348	645 aa		4.79	□□□□□ -1.64
LSB1	YGR136W	RNA1	P11745	407 aa	Known RBP	4.78	□□□□□ -1.64
LSB1	YGR136W	TPM1	P17536	199 aa	Known RBP	4.78	□□□□□ -1.64
LSB1	YGR136W	POL12	P38121	705 aa	Predicted RBP	4.78	□□□□□ -1.64
LSB1	YGR136W	EXO5	P38289	585 aa		4.78	□□□□□ -1.64
LSB1	YGR136W	HXT13	P39924	564 aa		4.78	□□□□□ -1.64
LSB1	YGR136W	IRR1	P40541	1150 aa		4.78	□□□□□ -1.64
LSB1	YGR136W	YGL242C	P53066	181 aa		4.78	□□□□□ -1.64
LSB1	YGR136W	YGR117C	P53270	476 aa		4.78	□□□□□ -1.64
LSB1	YGR136W	HXT17	P53631	564 aa		4.78	□□□□□ -1.64
LSB1	YGR136W	HXT15	P54854	567 aa		4.78	□□□□□ -1.64
LSB1	YGR136W	PEX13	P80667	386 aa		4.78	□□□□□ -1.64
LSB1	YGR136W	RKM2	Q03942	479 aa		4.78	□□□□□ -1.64
LSB1	YGR136W	PPM2	Q08282	695 aa		4.78	□□□□□ -1.64
LSB1	YGR136W	PSF3	Q12146	194 aa		4.78	□□□□□ -1.64
LSB1	YGR136W	OSH2	Q12451	1283 aa		4.78	□□□□□ -1.64
LSB1	YGR136W	DFG16	Q99234	619 aa		4.78	□□□□□ -1.64
LSB1	YGR136W	HKR1	P41809	1802 aa		4.78	□□□□□ -1.64
LSB1	YGR136W	ADR1	P07248	1323 aa		4.77	□□□□□ -1.65
LSB1	YGR136W	TRP2	P00899	507 aa	Known RBP	4.77	□□□□□ -1.65
LSB1	YGR136W	MET6	P05694	767 aa	Known RBP	4.77	□□□□□ -1.65
LSB1	YGR136W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.77	□□□□□ -1.65	RIP-Chip
LSB1	YGR136W	HTS1	P07263	546 aa	Known RBP	4.77	□□□□□ -1.65
LSB1	YGR136W	GAL11	P19659	1081 aa		4.77	□□□□□ -1.65
LSB1	YGR136W	PRI2	P20457	528 aa		4.77	□□□□□ -1.65
LSB1	YGR136W	BAS1	P22035	811 aa		4.77	□□□□□ -1.65
LSB1	YGR136W	RPS7A	P26786	190 aa	Known RBP	4.77	□□□□□ -1.65
LSB1	YGR136W	RPT3	P33298	428 aa	Known RBP	4.77	□□□□□ -1.65
LSB1	YGR136W	DEF1	P35732	738 aa	Known RBP	4.77	□□□□□ -1.65
LSB1	YGR136W	STV1	P37296	890 aa		4.77	□□□□□ -1.65
LSB1	YGR136W	PBY1	P38254	753 aa		4.77	□□□□□ -1.65
LSB1	YGR136W	OSH3	P38713	996 aa	Known RBP	4.77	□□□□□ -1.65
LSB1	YGR136W	PEA2	P40091	420 aa		4.77	□□□□□ -1.65
LSB1	YGR136W	YFH7	P43591	353 aa		4.77	□□□□□ -1.65
LSB1	YGR136W	YJR124C	P47159	448 aa		4.77	□□□□□ -1.65
LSB1	YGR136W	ERP6	P53198	216 aa		4.77	□□□□□ -1.65
LSB1	YGR136W	GIC2	Q06648	383 aa		4.77	□□□□□ -1.65
LSB1	YGR136W	ESC8	Q08119	714 aa		4.77	□□□□□ -1.65
LSB1	YGR136W	YIG1	Q08956	461 aa		4.77	□□□□□ -1.65
LSB1	YGR136W	POM152	P39685	1337 aa		4.76	□□□□□ -1.65
LSB1	YGR136W	CBP1	P07252	654 aa		4.76	□□□□□ -1.65
LSB1	YGR136W	GCD1	P09032	578 aa	Predicted RBP	4.76	□□□□□ -1.65
LSB1	YGR136W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.76	□□□□□ -1.65	not detected
LSB1	YGR136W	RER2	P35196	286 aa		4.76	□□□□□ -1.65
LSB1	YGR136W	YHR020W	P38708	688 aa	Known RBP	4.76	□□□□□ -1.65
LSB1	YGR136W	NUP82	P40368	713 aa		4.76	□□□□□ -1.65
LSB1	YGR136W	MRPS35	P53292	345 aa		4.76	□□□□□ -1.65
LSB1	YGR136W	YNL193W	P53870	558 aa		4.76	□□□□□ -1.65
LSB1	YGR136W	INM2	Q05533	292 aa		4.76	□□□□□ -1.65
LSB1	YGR136W	RPN7	Q06103	429 aa	Known RBP	4.76	□□□□□ -1.65
LSB1	YGR136W	ACK1	Q07622	623 aa	Predicted RBP	4.76	□□□□□ -1.65
LSB1	YGR136W	FLC1	Q08967	793 aa		4.76	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 7.5 ms