RNA–Protein interactions for RNA: YGR100W

MDR1, Transcript of Cytoplasmic GTPase-activating protein, yeast

Gene MDR1, Length 2,853 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MDR1	YGR100W	ITR2	P30606	609 aa		4.86	□□□□□ -1.63
MDR1	YGR100W	UTP11	P34247	250 aa	Predicted RBP	4.86	□□□□□ -1.63
MDR1	YGR100W	PGM2	P37012	569 aa	Known RBP	4.86	□□□□□ -1.63
MDR1	YGR100W	MCX1	P38323	520 aa	Predicted RBP	4.86	□□□□□ -1.63
MDR1	YGR100W	YHB1	P39676	399 aa	Known RBP	4.86	□□□□□ -1.63
MDR1	YGR100W	MEP1	P40260	492 aa		4.86	□□□□□ -1.63
MDR1	YGR100W	MMT1	Q03218	510 aa		4.86	□□□□□ -1.63
MDR1	YGR100W	YML082W	Q04533	649 aa	Known RBP	4.86	□□□□□ -1.63
MDR1	YGR100W	YOL057W	Q08225	711 aa		4.86	□□□□□ -1.63
MDR1	YGR100W	CDC53	Q12018	815 aa	Known RBP	4.86	□□□□□ -1.63
MDR1	YGR100W	TAF3	Q12297	353 aa		4.86	□□□□□ -1.63
MDR1	YGR100W	RPS19A	P07280	144 aa	Known RBP	4.85	□□□□□ -1.63
MDR1	YGR100W	RPS19B	P07281	144 aa	Predicted RBP	4.85	□□□□□ -1.63
MDR1	YGR100W	ADE2	P21264	571 aa	Known RBP	4.85	□□□□□ -1.63
MDR1	YGR100W	PWP1	P21304	576 aa	Known RBP	4.85	□□□□□ -1.63
MDR1	YGR100W	UBA1	P22515	1024 aa	Known RBP	4.85	□□□□□ -1.63
MDR1	YGR100W	RAD57	P25301	460 aa		4.85	□□□□□ -1.63
MDR1	YGR100W	POL4	P25615	582 aa		4.85	□□□□□ -1.63
MDR1	YGR100W	FTR1	P40088	404 aa		4.85	□□□□□ -1.63
MDR1	YGR100W	PDS1	P40316	373 aa	Predicted RBP	4.85	□□□□□ -1.63
MDR1	YGR100W	EFM4	P40516	257 aa		4.85	□□□□□ -1.63
MDR1	YGR100W	APS3	P47064	194 aa		4.85	□□□□□ -1.63
MDR1	YGR100W	MDE1	P47095	244 aa		4.85	□□□□□ -1.63
MDR1	YGR100W	MPS2	P53159	387 aa		4.85	□□□□□ -1.63
MDR1	YGR100W	HFD1	Q04458	532 aa		4.85	□□□□□ -1.63
MDR1	YGR100W	YLR287C	Q05881	355 aa		4.85	□□□□□ -1.63
MDR1	YGR100W	PIG1	Q06216	648 aa		4.85	□□□□□ -1.63
MDR1	YGR100W	RKM1	Q08961	583 aa	Predicted RBP	4.85	□□□□□ -1.63
MDR1	YGR100W	FAP7	Q12055	197 aa	Predicted RBP	4.85	□□□□□ -1.63
MDR1	YGR100W	ACF2	Q12168	779 aa		4.85	□□□□□ -1.63
MDR1	YGR100W	VMR1	P38735	1592 aa		4.85	□□□□□ -1.63
MDR1	YGR100W	PIF1	P07271	859 aa		4.85	□□□□□ -1.63
MDR1	YGR100W	MSS116	P15424	664 aa	Known RBP	4.85	□□□□□ -1.63
MDR1	YGR100W	VMA1	P17255	1071 aa	Known RBP	4.85	□□□□□ -1.63
MDR1	YGR100W	VPS1	P21576	704 aa	Known RBP	4.85	□□□□□ -1.63
MDR1	YGR100W	GDA1	P32621	518 aa		4.85	□□□□□ -1.63
MDR1	YGR100W	RAD24	P32641	659 aa		4.85	□□□□□ -1.63
MDR1	YGR100W	LAS1	P36146	502 aa	Predicted RBP	4.85	□□□□□ -1.63
MDR1	YGR100W	PXL1	P36166	706 aa		4.85	□□□□□ -1.63
MDR1	YGR100W	YHI9	P38765	294 aa		4.85	□□□□□ -1.63
MDR1	YGR100W	YER034W	P40022	185 aa	Known RBP	4.85	□□□□□ -1.63
MDR1	YGR100W	RTT105	P40063	208 aa		4.85	□□□□□ -1.63
MDR1	YGR100W	ESL1	P40456	1118 aa		4.85	□□□□□ -1.63
MDR1	YGR100W	IRR1	P40541	1150 aa		4.85	□□□□□ -1.63
MDR1	YGR100W	SNZ3	P43545	298 aa		4.85	□□□□□ -1.63
MDR1	YGR100W	IOC3	P43596	787 aa		4.85	□□□□□ -1.63
MDR1	YGR100W	MET12	P46151	657 aa		4.85	□□□□□ -1.63
MDR1	YGR100W	ALB1	P47019	175 aa	Predicted RBP	4.85	□□□□□ -1.63
MDR1	YGR100W	KEL2	P50090	882 aa		4.85	□□□□□ -1.63
MDR1	YGR100W	DSD1	P53095	428 aa		4.85	□□□□□ -1.63
MDR1	YGR100W	HOP2	P53187	214 aa		4.85	□□□□□ -1.63
MDR1	YGR100W	SNZ2	P53824	298 aa		4.85	□□□□□ -1.63
MDR1	YGR100W	ARV1	Q06541	321 aa		4.85	□□□□□ -1.63
MDR1	YGR100W	YLR125W	Q12138	136 aa		4.85	□□□□□ -1.63
MDR1	YGR100W	LSO2	Q3E772	92 aa	Known RBP	4.85	□□□□□ -1.63
MDR1	YGR100W	SPS1	P08458	490 aa		4.84	□□□□□ -1.63
MDR1	YGR100W	SSB1	P11484	613 aa	Known RBP	4.84	□□□□□ -1.63
MDR1	YGR100W	MRP8	P35719	219 aa		4.84	□□□□□ -1.63
MDR1	YGR100W	YKT6	P36015	200 aa	Known RBP	4.84	□□□□□ -1.63
MDR1	YGR100W	RTS1	P38903	757 aa		4.84	□□□□□ -1.63
MDR1	YGR100W	SSB2	P40150	613 aa	Known RBP	4.84	□□□□□ -1.63
MDR1	YGR100W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.63	not detected
MDR1	YGR100W	PXA1	P41909	870 aa		4.84	□□□□□ -1.63
MDR1	YGR100W	RPM2	Q02773	1202 aa		4.84	□□□□□ -1.63
MDR1	YGR100W	SNZ1	Q03148	297 aa		4.84	□□□□□ -1.63
MDR1	YGR100W	NGL3	Q03210	505 aa		4.84	□□□□□ -1.63
MDR1	YGR100W	USA1	Q03714	838 aa		4.84	□□□□□ -1.63
MDR1	YGR100W	KIN2	P13186	1147 aa	Known RBP	4.84	□□□□□ -1.63
MDR1	YGR100W	OSM1	P21375	501 aa	Known RBP	4.84	□□□□□ -1.63
MDR1	YGR100W	PHO84	P25297	587 aa	Known RBP	4.84	□□□□□ -1.63
MDR1	YGR100W	PRR1	P28708	518 aa		4.84	□□□□□ -1.63
MDR1	YGR100W	SIN4	P32259	974 aa		4.84	□□□□□ -1.63
MDR1	YGR100W	AFG2	P32794	780 aa		4.84	□□□□□ -1.63
MDR1	YGR100W	DUR3	P33413	735 aa		4.84	□□□□□ -1.63
MDR1	YGR100W	MIA40	P36046	403 aa		4.84	□□□□□ -1.63
MDR1	YGR100W	AVT6	P40074	448 aa		4.84	□□□□□ -1.63
MDR1	YGR100W	YTA12	P40341	825 aa		4.84	□□□□□ -1.63
MDR1	YGR100W	SAP185	P40856	1058 aa		4.84	□□□□□ -1.63
MDR1	YGR100W	ERG5	P54781	538 aa		4.84	□□□□□ -1.63
MDR1	YGR100W	HCR1	Q05775	265 aa	Known RBP	4.84	□□□□□ -1.63
MDR1	YGR100W	REP1	P03871	373 aa		4.83	□□□□□ -1.64
MDR1	YGR100W	POL30	P15873	258 aa	Known RBP	4.83	□□□□□ -1.64
MDR1	YGR100W	YAP1	P19880	650 aa	Known RBP	4.83	□□□□□ -1.64
MDR1	YGR100W	CNA1	P23287	553 aa		4.83	□□□□□ -1.64
MDR1	YGR100W	TSR4	P25040	408 aa		4.83	□□□□□ -1.64
MDR1	YGR100W	LCB1	P25045	558 aa	Known RBP	4.83	□□□□□ -1.64
MDR1	YGR100W	SAC6	P32599	642 aa	Known RBP	4.83	□□□□□ -1.64
MDR1	YGR100W	PXA2	P34230	853 aa		4.83	□□□□□ -1.64
MDR1	YGR100W	VPS21	P36017	210 aa	Known RBP	4.83	□□□□□ -1.64
MDR1	YGR100W	MNN2	P38069	597 aa		4.83	□□□□□ -1.64
MDR1	YGR100W	PIK1	P39104	1066 aa		4.83	□□□□□ -1.64
MDR1	YGR100W	EDC3	P39998	551 aa	Known RBP	4.83	□□□□□ -1.64
MDR1	YGR100W	YGL176C	P46945	554 aa		4.83	□□□□□ -1.64
MDR1	YGR100W	RFX1	P48743	811 aa		4.83	□□□□□ -1.64
MDR1	YGR100W	NAF1	P53919	492 aa	Known RBP	4.83	□□□□□ -1.64
MDR1	YGR100W	YNL108C	P53929	270 aa		4.83	□□□□□ -1.64
MDR1	YGR100W	TMA46	Q12000	345 aa	Known RBP	4.83	□□□□□ -1.64
MDR1	YGR100W	RGP1	P16664	663 aa		4.83	□□□□□ -1.64
MDR1	YGR100W	SPO12	P17123	173 aa		4.83	□□□□□ -1.64
MDR1	YGR100W	BUD23	P25627	275 aa	Predicted RBP	4.83	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms