RNA–Protein interactions for RNA: YER018C

SPC25, Transcript of Component of the kinetochore-associated Ndc80 complex, yeastyeast

Gene SPC25, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC25YER018C YKL023WP36103 277 aaKnown RBP11.77□□□□□ -0.53
SPC25YER018C VID24P38263 362 aa11.77□□□□□ -0.53
SPC25YER018C EFM2P38347 419 aa11.77□□□□□ -0.53
SPC25YER018C AIM21P40563 679 aa11.77□□□□□ -0.53
SPC25YER018C COS5P47187 383 aa11.77□□□□□ -0.53
SPC25YER018C HSH155P49955 971 aaKnown RBP11.77□□□□□ -0.53
SPC25YER018C HFM1P51979 1187 aa11.77□□□□□ -0.53
SPC25YER018C DON1Q05610 365 aa11.77□□□□□ -0.53
SPC25YER018C CDC53Q12018 815 aaKnown RBP11.77□□□□□ -0.53
SPC25YER018C APL4Q12028 832 aa11.77□□□□□ -0.53
SPC25YER018C WHI2P12611 486 aa11.76□□□□□ -0.53
SPC25YER018C MSS51P32335 436 aa11.76□□□□□ -0.53
SPC25YER018C DPH2P32461 534 aa11.76□□□□□ -0.53
SPC25YER018C DUR3P33413 735 aa11.76□□□□□ -0.53
SPC25YER018C NIP100P33420 868 aa11.76□□□□□ -0.53
SPC25YER018C PIN4P34217 668 aaKnown RBP RIP-Chip data11.76□□□□□ -0.53not detected
SPC25YER018C UIP5P36137 443 aa11.76□□□□□ -0.53
SPC25YER018C LDH1P38139 375 aa11.76□□□□□ -0.53
SPC25YER018C OSW7P43611 510 aa11.76□□□□□ -0.53
SPC25YER018C SCD6P45978 349 aaKnown RBP RIP-Chip data11.76□□□□□ -0.53not detected
SPC25YER018C ORC5P50874 479 aa11.76□□□□□ -0.53
SPC25YER018C UME1Q03010 460 aa11.76□□□□□ -0.53
SPC25YER018C PLP2Q12017 286 aa11.76□□□□□ -0.53
SPC25YER018C MOT1P32333 1867 aa11.76□□□□□ -0.53
SPC25YER018C VMA1P17255 1071 aaKnown RBP11.75□□□□□ -0.53
SPC25YER018C RRP43P25359 394 aaPredicted RBP11.75□□□□□ -0.53
SPC25YER018C SPC110P32380 944 aa11.75□□□□□ -0.53
SPC25YER018C TMT1P32643 299 aa11.75□□□□□ -0.53
SPC25YER018C PXL1P36166 706 aa11.75□□□□□ -0.53
SPC25YER018C VFA1P40080 203 aa11.75□□□□□ -0.53
SPC25YER018C SHE10P53075 577 aa11.75□□□□□ -0.53
SPC25YER018C ENV11P53246 860 aa11.75□□□□□ -0.53
SPC25YER018C YLR297WQ05899 129 aa11.75□□□□□ -0.53
SPC25YER018C YCG1Q06680 1035 aa11.75□□□□□ -0.53
SPC25YER018C SMC1P32908 1225 aa11.74□□□□□ -0.53
SPC25YER018C AZR1P50080 613 aa11.74□□□□□ -0.53
SPC25YER018C TRS130Q03660 1102 aa11.74□□□□□ -0.53
SPC25YER018C SHS1Q07657 551 aa11.74□□□□□ -0.53
SPC25YER018C HMI1Q12039 706 aa11.74□□□□□ -0.53
SPC25YER018C SLX4Q12098 748 aa11.74□□□□□ -0.53
SPC25YER018C NPP2P39997 493 aa11.73□□□□□ -0.53
SPC25YER018C ALD5P40047 520 aaKnown RBP11.73□□□□□ -0.53
SPC25YER018C INP51P40559 946 aaKnown RBP11.73□□□□□ -0.53
SPC25YER018C FIG4P42837 879 aa11.73□□□□□ -0.53
SPC25YER018C ASN1P49089 572 aaKnown RBP11.73□□□□□ -0.53
SPC25YER018C MNP1P53163 194 aaPredicted RBP11.73□□□□□ -0.53
SPC25YER018C CUS1Q02554 436 aaPredicted RBP11.73□□□□□ -0.53
SPC25YER018C CEF1Q03654 590 aaPredicted RBP11.73□□□□□ -0.53
SPC25YER018C ECM7Q06200 448 aa11.73□□□□□ -0.53
SPC25YER018C YPR078CQ06813 372 aa11.73□□□□□ -0.53
SPC25YER018C SPO12P17123 173 aa11.72□□□□□ -0.53
SPC25YER018C SKG6P32900 734 aaPredicted RBP11.72□□□□□ -0.53
SPC25YER018C YAP5P40574 245 aa11.72□□□□□ -0.53
SPC25YER018C TBF1Q02457 562 aa11.72□□□□□ -0.53
SPC25YER018C ZPS1Q12512 249 aa11.72□□□□□ -0.53
SPC25YER018C PAM1P37304 830 aaKnown RBP11.71□□□□□ -0.53
SPC25YER018C PCH2P38126 564 aa11.71□□□□□ -0.53
SPC25YER018C SMC2P38989 1170 aaKnown RBP11.71□□□□□ -0.53
SPC25YER018C IES1P43579 692 aa11.71□□□□□ -0.53
SPC25YER018C SMC3P47037 1230 aa11.71□□□□□ -0.53
SPC25YER018C UBP3Q01477 912 aaKnown RBP RIP-Chip data11.71□□□□□ -0.53not detected
SPC25YER018C VPS38Q05919 439 aa11.71□□□□□ -0.53
SPC25YER018C CSR1Q06705 408 aaKnown RBP11.71□□□□□ -0.53
SPC25YER018C PPR1P07272 904 aaPredicted RBP11.7□□□□□ -0.54
SPC25YER018C PDC6P26263 563 aaKnown RBP11.7□□□□□ -0.54
SPC25YER018C CBF2P32504 956 aa11.7□□□□□ -0.54
SPC25YER018C MMS4P38257 691 aa11.7□□□□□ -0.54
SPC25YER018C KIC1P38692 1080 aa11.7□□□□□ -0.54
SPC25YER018C ATG3P40344 310 aa11.7□□□□□ -0.54
SPC25YER018C ESC2Q06340 456 aa11.7□□□□□ -0.54
SPC25YER018C RGA2Q06407 1009 aa11.7□□□□□ -0.54
SPC25YER018C YOL098CQ12496 1037 aa11.7□□□□□ -0.54
SPC25YER018C YDR524C-BQ3E6R4 66 aa11.7□□□□□ -0.54
SPC25YER018C RIF1P29539 1916 aa11.7□□□□□ -0.54
SPC25YER018C TUP1P16649 713 aa11.69□□□□□ -0.54
SPC25YER018C DRE2P36152 348 aa11.69□□□□□ -0.54
SPC25YER018C JNM1P36224 373 aa11.69□□□□□ -0.54
SPC25YER018C MRX3P38172 270 aa11.69□□□□□ -0.54
SPC25YER018C SHQ1P40486 507 aaPredicted RBP11.69□□□□□ -0.54
SPC25YER018C SGM1P47166 707 aa11.69□□□□□ -0.54
SPC25YER018C MUK1Q02866 612 aa11.69□□□□□ -0.54
SPC25YER018C UTP5Q04177 643 aaKnown RBP11.69□□□□□ -0.54
SPC25YER018C YDL206WQ12424 762 aa11.69□□□□□ -0.54
SPC25YER018C MTF2P10849 440 aa11.68□□□□□ -0.54
SPC25YER018C SWI3P32591 825 aa11.68□□□□□ -0.54
SPC25YER018C AVT3P36062 692 aa11.68□□□□□ -0.54
SPC25YER018C TVP23P38962 199 aa11.68□□□□□ -0.54
SPC25YER018C FTR1P40088 404 aa11.68□□□□□ -0.54
SPC25YER018C TAD1P53065 400 aa11.68□□□□□ -0.54
SPC25YER018C ERG5P54781 538 aa11.68□□□□□ -0.54
SPC25YER018C OPY2Q06810 360 aa11.68□□□□□ -0.54
SPC25YER018C ADE4P04046 510 aaKnown RBP11.67□□□□□ -0.54
SPC25YER018C TOM70P07213 617 aaKnown RBP11.67□□□□□ -0.54
SPC25YER018C HEM1P09950 548 aaPredicted RBP11.67□□□□□ -0.54
SPC25YER018C RPL4AP10664 362 aaKnown RBP11.67□□□□□ -0.54
SPC25YER018C IME1P21190 360 aa11.67□□□□□ -0.54
SPC25YER018C PRR1P28708 518 aa11.67□□□□□ -0.54
SPC25YER018C SDS3P40505 327 aa11.67□□□□□ -0.54
SPC25YER018C MMM1P41800 426 aa11.67□□□□□ -0.54
SPC25YER018C LAM5P43560 674 aa11.67□□□□□ -0.54
Retrieved 100 of 5,963 RNA–protein pairs in 38.6 ms