RNA–Protein interactions for RNA: YER008C

SEC3, Transcript of Subunit of the exocyst complex, yeastyeast

Gene SEC3, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC3YER008C MEF1P25039 761 aa1.63□□□□□ -2.15
SEC3YER008C SBA1P28707 216 aaKnown RBP1.63□□□□□ -2.15
SEC3YER008C YKL222CP35995 705 aa1.63□□□□□ -2.15
SEC3YER008C ERT1P38140 529 aa1.63□□□□□ -2.15
SEC3YER008C PBY1P38254 753 aa1.63□□□□□ -2.15
SEC3YER008C SAF1P38352 637 aa1.63□□□□□ -2.15
SEC3YER008C ETP1P38748 585 aaKnown RBP1.63□□□□□ -2.15
SEC3YER008C ERP2P39704 215 aa1.63□□□□□ -2.15
SEC3YER008C NIT3P49954 291 aa1.63□□□□□ -2.15
SEC3YER008C GPG1P53130 126 aa1.63□□□□□ -2.15
SEC3YER008C EEB1Q02891 456 aa1.63□□□□□ -2.15
SEC3YER008C SSY1Q03770 852 aa1.63□□□□□ -2.15
SEC3YER008C MED7Q08278 222 aa1.63□□□□□ -2.15
SEC3YER008C TRM732Q03496 1420 aa1.63□□□□□ -2.15
SEC3YER008C CAD1P24813 409 aaKnown RBP1.63□□□□□ -2.15
SEC3YER008C SFA1P32771 386 aa1.63□□□□□ -2.15
SEC3YER008C ARL1P38116 183 aaKnown RBP1.63□□□□□ -2.15
SEC3YER008C FPR3P38911 411 aaKnown RBP1.63□□□□□ -2.15
SEC3YER008C CEP3P40969 608 aa1.63□□□□□ -2.15
SEC3YER008C PSP2P50109 593 aaKnown RBP1.63□□□□□ -2.15
SEC3YER008C TGL2P54857 326 aa1.63□□□□□ -2.15
SEC3YER008C TRE1Q08919 783 aa1.63□□□□□ -2.15
SEC3YER008C NUP192P47054 1683 aa1.63□□□□□ -2.15
SEC3YER008C THS1P04801 734 aaKnown RBP1.63□□□□□ -2.15
SEC3YER008C YER152CP10356 443 aa1.63□□□□□ -2.15
SEC3YER008C HEM13P11353 328 aaKnown RBP1.63□□□□□ -2.15
SEC3YER008C TAF13P11747 167 aa1.63□□□□□ -2.15
SEC3YER008C CRR1Q05790 422 aa1.63□□□□□ -2.15
SEC3YER008C VTS1Q08831 523 aaKnown RBP RIP-Chip data1.63□□□□□ -2.15not detected
SEC3YER008C GSY1P23337 708 aa1.63□□□□□ -2.15
SEC3YER008C YSC84P32793 468 aa1.63□□□□□ -2.15
SEC3YER008C TFC4P33339 1025 aa1.63□□□□□ -2.15
SEC3YER008C VID27P40157 782 aa1.63□□□□□ -2.15
SEC3YER008C YJL049WP47048 450 aa1.63□□□□□ -2.15
SEC3YER008C ARI1P53111 347 aaKnown RBP1.63□□□□□ -2.15
SEC3YER008C ROT1Q03691 256 aa1.63□□□□□ -2.15
SEC3YER008C GNT1Q12096 491 aa1.63□□□□□ -2.15
SEC3YER008C NUP145P49687 1317 aa1.62□□□□□ -2.15
SEC3YER008C YIL177CP40434 1758 aa1.62□□□□□ -2.15
SEC3YER008C YJL225CP40889 1758 aa1.62□□□□□ -2.15
SEC3YER008C MPH2P0CD99 609 aa1.62□□□□□ -2.15
SEC3YER008C HIR1P32479 840 aa1.62□□□□□ -2.15
SEC3YER008C GGA2P38817 585 aaKnown RBP1.62□□□□□ -2.15
SEC3YER008C HLJ1P48353 224 aa1.62□□□□□ -2.15
SEC3YER008C MAL11P53048 616 aa1.62□□□□□ -2.15
SEC3YER008C TFB2Q02939 513 aa1.62□□□□□ -2.15
SEC3YER008C ENT2Q05785 613 aa1.62□□□□□ -2.15
SEC3YER008C NOP14Q99207 810 aaKnown RBP1.62□□□□□ -2.15
SEC3YER008C AI3P03877 415 aa1.62□□□□□ -2.15
SEC3YER008C YEF3P16521 1044 aaKnown RBP1.62□□□□□ -2.15
SEC3YER008C MDL2P33311 773 aa1.62□□□□□ -2.15
SEC3YER008C RFC5P38251 354 aa1.62□□□□□ -2.15
SEC3YER008C GPP1P41277 250 aaKnown RBP1.62□□□□□ -2.15
SEC3YER008C PFD1P46988 109 aa1.62□□□□□ -2.15
SEC3YER008C DAS1P47005 663 aa1.62□□□□□ -2.15
SEC3YER008C YRB30P53107 440 aaPredicted RBP1.62□□□□□ -2.15
SEC3YER008C EAR1Q03212 550 aa1.62□□□□□ -2.15
SEC3YER008C YOR059CQ08448 450 aaKnown RBP1.62□□□□□ -2.15
SEC3YER008C PDR5P33302 1511 aaKnown RBP1.62□□□□□ -2.15
SEC3YER008C PRC1P00729 532 aa1.62□□□□□ -2.15
SEC3YER008C AGP1P25376 633 aa1.62□□□□□ -2.15
SEC3YER008C SRP101P32916 621 aa1.62□□□□□ -2.15
SEC3YER008C AMN1P38285 549 aaPredicted RBP1.62□□□□□ -2.15
SEC3YER008C IRR1P40541 1150 aa1.62□□□□□ -2.15
SEC3YER008C YFL052WP43551 465 aa1.62□□□□□ -2.15
SEC3YER008C BNA1P47096 177 aa1.62□□□□□ -2.15
SEC3YER008C SPT20P50875 604 aa1.62□□□□□ -2.15
SEC3YER008C NCE103P53615 221 aa1.62□□□□□ -2.15
SEC3YER008C FKS3Q04952 1785 aa1.62□□□□□ -2.15
SEC3YER008C FMP25Q08023 583 aa1.62□□□□□ -2.15
SEC3YER008C YLR125WQ12138 136 aa1.62□□□□□ -2.15
SEC3YER008C PER1P25625 357 aa1.61□□□□□ -2.15
SEC3YER008C UGA2P38067 497 aa1.61□□□□□ -2.15
SEC3YER008C HSV2P50079 448 aaPredicted RBP1.61□□□□□ -2.15
SEC3YER008C YGR237CP50089 785 aa1.61□□□□□ -2.15
SEC3YER008C NOG1Q02892 647 aaKnown RBP1.61□□□□□ -2.15
SEC3YER008C RKM2Q03942 479 aa1.61□□□□□ -2.15
SEC3YER008C BRE1Q07457 700 aaKnown RBP1.61□□□□□ -2.15
SEC3YER008C YLR122CQ12312 125 aa1.61□□□□□ -2.15
SEC3YER008C YVC1Q12324 675 aa1.61□□□□□ -2.15
SEC3YER008C RPL8BP29453 256 aaKnown RBP1.61□□□□□ -2.15
SEC3YER008C ZRG8P40021 1076 aa1.61□□□□□ -2.15
SEC3YER008C ALY2P47029 1046 aa1.61□□□□□ -2.15
SEC3YER008C YGR053CP53234 283 aa1.61□□□□□ -2.15
SEC3YER008C YDR514CQ04408 483 aa1.61□□□□□ -2.15
SEC3YER008C TY4B-HP0C2J7 1802 aa1.61□□□□□ -2.15
SEC3YER008C TY4B-JP47024 1803 aa1.61□□□□□ -2.15
SEC3YER008C YBR238CP38330 731 aaKnown RBP1.61□□□□□ -2.15
SEC3YER008C YER158CP40095 573 aa1.61□□□□□ -2.15
SEC3YER008C YFL054CP43549 646 aa1.61□□□□□ -2.15
SEC3YER008C SAP155P43612 1002 aa1.61□□□□□ -2.15
SEC3YER008C COX18P53239 316 aa1.61□□□□□ -2.15
SEC3YER008C SLX4Q12098 748 aa1.61□□□□□ -2.15
SEC3YER008C IQG1Q12280 1495 aa1.6□□□□□ -2.15
SEC3YER008C GCN2P15442 1659 aa1.6□□□□□ -2.15
SEC3YER008C YCK2P23292 546 aaKnown RBP1.6□□□□□ -2.15
SEC3YER008C EXO84P38261 753 aa1.6□□□□□ -2.15
SEC3YER008C NYV1Q12255 253 aa1.6□□□□□ -2.15
SEC3YER008C RAD18P10862 487 aa1.6□□□□□ -2.15
SEC3YER008C RAD53P22216 821 aa1.6□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 49 ms