RNA–Protein interactions for RNA: YDR460W

TFB3, Transcript of Subunit of TFIIH and nucleotide excision repair factor 3 complexes, yeast

Gene TFB3, Length 966 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFB3	YDR460W	CCT5	P40413	562 aa	Known RBP	4.96	□□□□□ -1.62
TFB3	YDR460W	YIL001W	P40560	513 aa		4.96	□□□□□ -1.62
TFB3	YDR460W	MRPS18	P42847	217 aa		4.96	□□□□□ -1.62
TFB3	YDR460W	MTR4	P47047	1073 aa	Known RBP	4.96	□□□□□ -1.62
TFB3	YDR460W	INP52	P50942	1183 aa		4.96	□□□□□ -1.62
TFB3	YDR460W	HOS2	P53096	452 aa	Predicted RBP	4.96	□□□□□ -1.62
TFB3	YDR460W	GUP1	P53154	560 aa		4.96	□□□□□ -1.62
TFB3	YDR460W	YNR065C	P53751	1116 aa		4.96	□□□□□ -1.62
TFB3	YDR460W	NCS2	P53923	493 aa	Predicted RBP	4.96	□□□□□ -1.62
TFB3	YDR460W	VTC3	Q02725	835 aa		4.96	□□□□□ -1.62
TFB3	YDR460W	YPL109C	Q02981	657 aa		4.96	□□□□□ -1.62
TFB3	YDR460W	RBA50	Q04418	439 aa		4.96	□□□□□ -1.62
TFB3	YDR460W	FAR8	Q05040	523 aa		4.96	□□□□□ -1.62
TFB3	YDR460W	HRQ1	Q05549	1077 aa		4.96	□□□□□ -1.62
TFB3	YDR460W	YCG1	Q06680	1035 aa		4.96	□□□□□ -1.62
TFB3	YDR460W	SLP1	Q12232	587 aa		4.96	□□□□□ -1.62
TFB3	YDR460W	RTC1	Q08281	1341 aa		4.96	□□□□□ -1.62
TFB3	YDR460W	GCD2	P12754	651 aa	Predicted RBP	4.95	□□□□□ -1.62
TFB3	YDR460W	POL4	P25615	582 aa		4.95	□□□□□ -1.62
TFB3	YDR460W	RPC34	P32910	317 aa		4.95	□□□□□ -1.62
TFB3	YDR460W	KDX1	P36005	433 aa		4.95	□□□□□ -1.62
TFB3	YDR460W	SRL3	P36167	246 aa		4.95	□□□□□ -1.62
TFB3	YDR460W	ERC1	P38767	581 aa		4.95	□□□□□ -1.62
TFB3	YDR460W	BEM4	P39011	633 aa		4.95	□□□□□ -1.62
TFB3	YDR460W	CCT4	P39078	528 aa	Known RBP	4.95	□□□□□ -1.62
TFB3	YDR460W	SPC72	P39723	622 aa		4.95	□□□□□ -1.62
TFB3	YDR460W	CTK3	P46963	296 aa	Predicted RBP	4.95	□□□□□ -1.62
TFB3	YDR460W	ENP2	P48234	707 aa	Known RBP	4.95	□□□□□ -1.62
TFB3	YDR460W	HOP2	P53187	214 aa		4.95	□□□□□ -1.62
TFB3	YDR460W	SOK2	P53438	785 aa	Predicted RBP	4.95	□□□□□ -1.62
TFB3	YDR460W	CTF4	Q01454	927 aa		4.95	□□□□□ -1.62
TFB3	YDR460W	ADI1	Q03677	179 aa		4.95	□□□□□ -1.62
TFB3	YDR460W	FUS2	Q05670	677 aa		4.95	□□□□□ -1.62
TFB3	YDR460W	YLR257W	Q06146	321 aa	Known RBP	4.95	□□□□□ -1.62
TFB3	YDR460W	SGT2	Q12118	346 aa	Known RBP	4.95	□□□□□ -1.62
TFB3	YDR460W	MCD1	Q12158	566 aa		4.95	□□□□□ -1.62
TFB3	YDR460W	REP1	P03871	373 aa		4.94	□□□□□ -1.62
TFB3	YDR460W	RPB2	P08518	1224 aa	Known RBP	4.94	□□□□□ -1.62
TFB3	YDR460W	TYR1	P20049	452 aa		4.94	□□□□□ -1.62
TFB3	YDR460W	RPO26	P20435	155 aa		4.94	□□□□□ -1.62
TFB3	YDR460W	FAR1	P21268	830 aa		4.94	□□□□□ -1.62
TFB3	YDR460W	MSM1	P22438	575 aa		4.94	□□□□□ -1.62
TFB3	YDR460W	NAR1	P23503	491 aa	Known RBP	4.94	□□□□□ -1.62
TFB3	YDR460W	PRE9	P23638	258 aa	Known RBP	4.94	□□□□□ -1.62
TFB3	YDR460W	KAR9	P32526	644 aa		4.94	□□□□□ -1.62
TFB3	YDR460W	YKL091C	P33324	310 aa	Known RBP	4.94	□□□□□ -1.62
TFB3	YDR460W	MRPL40	P36534	297 aa		4.94	□□□□□ -1.62
TFB3	YDR460W	MET18	P40469	1032 aa		4.94	□□□□□ -1.62
TFB3	YDR460W	FET4	P40988	552 aa		4.94	□□□□□ -1.62
TFB3	YDR460W	LSB6	P42951	607 aa		4.94	□□□□□ -1.62
TFB3	YDR460W	OSW7	P43611	510 aa		4.94	□□□□□ -1.62
TFB3	YDR460W	KEL2	P50090	882 aa		4.94	□□□□□ -1.62
TFB3	YDR460W	FAR11	P53917	953 aa		4.94	□□□□□ -1.62
TFB3	YDR460W	RAT1	Q02792	1006 aa	Known RBP	4.94	□□□□□ -1.62
TFB3	YDR460W	GIS4	Q04233	774 aa		4.94	□□□□□ -1.62
TFB3	YDR460W	YMR111C	Q04461	462 aa	Predicted RBP	4.94	□□□□□ -1.62
TFB3	YDR460W	MRD1	Q06106	887 aa	Known RBP	4.94	□□□□□ -1.62
TFB3	YDR460W	HMI1	Q12039	706 aa		4.94	□□□□□ -1.62
TFB3	YDR460W	VIK1	Q12045	647 aa		4.94	□□□□□ -1.62
TFB3	YDR460W	SES1	P07284	462 aa	Known RBP	4.93	□□□□□ -1.62
TFB3	YDR460W	PRP16	P15938	1071 aa	Predicted RBP	4.93	□□□□□ -1.62
TFB3	YDR460W	TUP1	P16649	713 aa		4.93	□□□□□ -1.62
TFB3	YDR460W	GAL11	P19659	1081 aa		4.93	□□□□□ -1.62
TFB3	YDR460W	VPS1	P21576	704 aa	Known RBP	4.93	□□□□□ -1.62
TFB3	YDR460W	VPH2	P32341	215 aa		4.93	□□□□□ -1.62
TFB3	YDR460W	CNS1	P33313	385 aa		4.93	□□□□□ -1.62
TFB3	YDR460W	YEL1	P34225	687 aa		4.93	□□□□□ -1.62
TFB3	YDR460W	COY1	P34237	679 aa		4.93	□□□□□ -1.62
TFB3	YDR460W	NUP120	P35729	1037 aa		4.93	□□□□□ -1.62
TFB3	YDR460W	HEL1	P36113	551 aa		4.93	□□□□□ -1.62
TFB3	YDR460W	PGM2	P37012	569 aa	Known RBP	4.93	□□□□□ -1.62
TFB3	YDR460W	ALG14	P38242	237 aa		4.93	□□□□□ -1.62
TFB3	YDR460W	SSZ1	P38788	538 aa	Known RBP	4.93	□□□□□ -1.62
TFB3	YDR460W	GIP2	P40036	548 aa		4.93	□□□□□ -1.62
TFB3	YDR460W	NEO1	P40527	1151 aa		4.93	□□□□□ -1.62
TFB3	YDR460W	SYG1	P40528	902 aa		4.93	□□□□□ -1.62
TFB3	YDR460W	IOC3	P43596	787 aa		4.93	□□□□□ -1.62
TFB3	YDR460W	TRS85	P46944	698 aa		4.93	□□□□□ -1.62
TFB3	YDR460W	SHE10	P53075	577 aa		4.93	□□□□□ -1.62
TFB3	YDR460W	DUS1	P53759	423 aa	Known RBP	4.93	□□□□□ -1.62
TFB3	YDR460W	SQS1	P53866	767 aa	Known RBP	4.93	□□□□□ -1.62
TFB3	YDR460W	SEC5	P89102	971 aa		4.93	□□□□□ -1.62
TFB3	YDR460W	HAS1	Q03532	505 aa	Known RBP	4.93	□□□□□ -1.62
TFB3	YDR460W	JIP5	Q06214	492 aa	Predicted RBP	4.93	□□□□□ -1.62
TFB3	YDR460W	APC2	Q12440	853 aa		4.93	□□□□□ -1.62
TFB3	YDR460W	CTT1	P06115	562 aa		4.92	□□□□□ -1.62
TFB3	YDR460W	PMR1	P13586	950 aa		4.92	□□□□□ -1.62
TFB3	YDR460W	DAL5	P15365	543 aa		4.92	□□□□□ -1.62
TFB3	YDR460W	PHO84	P25297	587 aa	Known RBP	4.92	□□□□□ -1.62
TFB3	YDR460W	TOS1	P38288	455 aa		4.92	□□□□□ -1.62
TFB3	YDR460W	SHU2	P38957	223 aa		4.92	□□□□□ -1.62
TFB3	YDR460W	PIC2	P40035	300 aa		4.92	□□□□□ -1.62
TFB3	YDR460W	RTR1	P40084	226 aa	Predicted RBP	4.92	□□□□□ -1.62
TFB3	YDR460W	GVP36	P40531	326 aa	Known RBP	4.92	□□□□□ -1.62
TFB3	YDR460W	RSM26	P47141	266 aa		4.92	□□□□□ -1.62
TFB3	YDR460W	SGM1	P47166	707 aa		4.92	□□□□□ -1.62
TFB3	YDR460W	COP1	P53622	1201 aa	Known RBP	4.92	□□□□□ -1.62
TFB3	YDR460W	MFM1	Q02783	413 aa		4.92	□□□□□ -1.62
TFB3	YDR460W	FMP30	Q02883	468 aa		4.92	□□□□□ -1.62
TFB3	YDR460W	NOG1	Q02892	647 aa	Known RBP	4.92	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 9.8 ms