RNA–Protein interactions for RNA: YDR397C

NCB2, Transcript of Subunit of a heterodimeric NC2 transcription regulator complex, yeast

Gene NCB2, Length 441 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NCB2	YDR397C	PMA1	P05030	918 aa	Known RBP	4.26	□□□□□ -1.73
NCB2	YDR397C	FBP1	P09201	348 aa		4.26	□□□□□ -1.73
NCB2	YDR397C	MPH2	P0CD99	609 aa		4.26	□□□□□ -1.73
NCB2	YDR397C	HCM1	P25364	564 aa		4.26	□□□□□ -1.73
NCB2	YDR397C	URA1	P28272	314 aa	Predicted RBP	4.26	□□□□□ -1.73
NCB2	YDR397C	ERT1	P38140	529 aa		4.26	□□□□□ -1.73
NCB2	YDR397C	RSP5	P39940	809 aa	Known RBP	4.26	□□□□□ -1.73
NCB2	YDR397C	NIT3	P49954	291 aa		4.26	□□□□□ -1.73
NCB2	YDR397C	ENV7	Q12003	364 aa		4.26	□□□□□ -1.73
NCB2	YDR397C	UPC2	Q12151	913 aa		4.26	□□□□□ -1.73
NCB2	YDR397C	YOR131C	Q12486	218 aa		4.26	□□□□□ -1.73
NCB2	YDR397C	CAN1	P04817	590 aa		4.25	□□□□□ -1.73
NCB2	YDR397C	TOP3	P13099	656 aa		4.25	□□□□□ -1.73
NCB2	YDR397C	SED4	P25365	1065 aa		4.25	□□□□□ -1.73
NCB2	YDR397C	PMI40	P29952	429 aa	Known RBP	4.25	□□□□□ -1.73
NCB2	YDR397C	TYE7	P33122	291 aa	Predicted RBP	4.25	□□□□□ -1.73
NCB2	YDR397C	CHZ1	P40019	153 aa	Predicted RBP	4.25	□□□□□ -1.73
NCB2	YDR397C	YKR011C	Q02209	353 aa		4.25	□□□□□ -1.73
NCB2	YDR397C	RPN4	Q03465	531 aa		4.25	□□□□□ -1.73
NCB2	YDR397C	WHI4	Q07655	649 aa	Known RBP	4.25	□□□□□ -1.73
NCB2	YDR397C	NTO1	Q12311	748 aa		4.25	□□□□□ -1.73
NCB2	YDR397C	PNS1	Q12412	539 aa		4.25	□□□□□ -1.73
NCB2	YDR397C	TOM70	P07213	617 aa	Known RBP	4.24	□□□□□ -1.73
NCB2	YDR397C	SRP40	P32583	406 aa	Predicted RBP	4.24	□□□□□ -1.73
NCB2	YDR397C	STE14	P32584	239 aa		4.24	□□□□□ -1.73
NCB2	YDR397C	EMC3	P36039	253 aa		4.24	□□□□□ -1.73
NCB2	YDR397C	BET3	P36149	193 aa		4.24	□□□□□ -1.73
NCB2	YDR397C	DAM1	P53267	343 aa		4.24	□□□□□ -1.73
NCB2	YDR397C	RPS9A	O13516	197 aa	Known RBP	4.23	□□□□□ -1.73
NCB2	YDR397C	CTF8	P38877	133 aa		4.23	□□□□□ -1.73
NCB2	YDR397C	SDP1	P40479	209 aa		4.23	□□□□□ -1.73
NCB2	YDR397C	NOG2	P53742	486 aa	Known RBP	4.23	□□□□□ -1.73
NCB2	YDR397C	HDA1	P53973	706 aa		4.23	□□□□□ -1.73
NCB2	YDR397C	SSL1	Q04673	461 aa	Predicted RBP	4.23	□□□□□ -1.73
NCB2	YDR397C	PPM2	Q08282	695 aa		4.23	□□□□□ -1.73
NCB2	YDR397C	PFK1	P16861	987 aa	Known RBP	4.22	□□□□□ -1.73
NCB2	YDR397C	YIL108W	P40483	696 aa	Known RBP	4.22	□□□□□ -1.73
NCB2	YDR397C	CEP3	P40969	608 aa		4.22	□□□□□ -1.73
NCB2	YDR397C	ALG2	P43636	503 aa		4.22	□□□□□ -1.73
NCB2	YDR397C	MSE1	P48525	536 aa		4.22	□□□□□ -1.73
NCB2	YDR397C	RTA1	P53047	317 aa		4.22	□□□□□ -1.73
NCB2	YDR397C	YGR283C	P53336	341 aa	Predicted RBP	4.22	□□□□□ -1.73
NCB2	YDR397C	REH1	Q06709	432 aa		4.22	□□□□□ -1.73
NCB2	YDR397C	PUS9	Q12069	462 aa		4.22	□□□□□ -1.73
NCB2	YDR397C	KAR4	P25583	335 aa		4.21	□□□□□ -1.74
NCB2	YDR397C	YKL091C	P33324	310 aa	Known RBP	4.21	□□□□□ -1.74
NCB2	YDR397C	DEF1	P35732	738 aa	Known RBP	4.21	□□□□□ -1.74
NCB2	YDR397C	GYP8	P43570	497 aa		4.21	□□□□□ -1.74
NCB2	YDR397C	RPD3	P32561	433 aa		4.2	□□□□□ -1.74
NCB2	YDR397C	AIM21	P40563	679 aa		4.2	□□□□□ -1.74
NCB2	YDR397C	PHO23	P50947	330 aa		4.2	□□□□□ -1.74
NCB2	YDR397C	PUS2	P53167	370 aa		4.2	□□□□□ -1.74
NCB2	YDR397C	ATP25	Q03153	612 aa		4.2	□□□□□ -1.74
NCB2	YDR397C	YTA7	P40340	1379 aa		4.19	□□□□□ -1.74
NCB2	YDR397C	CYS3	P31373	394 aa	Known RBP	4.19	□□□□□ -1.74
NCB2	YDR397C	BUD6	P41697	788 aa		4.19	□□□□□ -1.74
NCB2	YDR397C	AIM39	Q08223	395 aa		4.19	□□□□□ -1.74
NCB2	YDR397C	TRP4	P07285	380 aa	Predicted RBP	4.18	□□□□□ -1.74
NCB2	YDR397C	DAL7	P21826	554 aa		4.18	□□□□□ -1.74
NCB2	YDR397C	SEC21	P32074	935 aa	Known RBP	4.18	□□□□□ -1.74
NCB2	YDR397C	SPC29	P33419	253 aa		4.18	□□□□□ -1.74
NCB2	YDR397C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
NCB2	YDR397C	YHR078W	P38799	552 aa		4.18	□□□□□ -1.74
NCB2	YDR397C	OSW7	P43611	510 aa		4.18	□□□□□ -1.74
NCB2	YDR397C	DUS1	P53759	423 aa	Known RBP	4.18	□□□□□ -1.74
NCB2	YDR397C	YDR514C	Q04408	483 aa		4.18	□□□□□ -1.74
NCB2	YDR397C	FPR4	Q06205	392 aa	Predicted RBP	4.18	□□□□□ -1.74
NCB2	YDR397C	SWM1	Q12379	170 aa		4.18	□□□□□ -1.74
NCB2	YDR397C	LAS17	Q12446	633 aa		4.18	□□□□□ -1.74
NCB2	YDR397C	CAD1	P24813	409 aa	Known RBP	4.17	□□□□□ -1.74
NCB2	YDR397C	HRR25	P29295	494 aa	Known RBP	4.17	□□□□□ -1.74
NCB2	YDR397C	MSS4	P38994	779 aa		4.17	□□□□□ -1.74
NCB2	YDR397C	GDH3	P39708	457 aa		4.17	□□□□□ -1.74
NCB2	YDR397C	TAD1	P53065	400 aa		4.17	□□□□□ -1.74
NCB2	YDR397C	SLU7	Q02775	382 aa	Known RBP	4.17	□□□□□ -1.74
NCB2	YDR397C	PEX19	Q07418	342 aa		4.17	□□□□□ -1.74
NCB2	YDR397C	MET7	Q08645	548 aa		4.17	□□□□□ -1.74
NCB2	YDR397C	YLR125W	Q12138	136 aa		4.17	□□□□□ -1.74
NCB2	YDR397C	HAL9	Q12180	1030 aa		4.17	□□□□□ -1.74
NCB2	YDR397C	TRM11	Q12463	433 aa		4.17	□□□□□ -1.74
NCB2	YDR397C	PRC1	P00729	532 aa		4.16	□□□□□ -1.74
NCB2	YDR397C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	not detected
NCB2	YDR397C	TIM23	P32897	222 aa		4.16	□□□□□ -1.74
NCB2	YDR397C	KTR4	P38131	464 aa		4.16	□□□□□ -1.74
NCB2	YDR397C	SET5	P38890	526 aa	Known RBP	4.16	□□□□□ -1.74
NCB2	YDR397C	BUL1	P48524	976 aa		4.16	□□□□□ -1.74
NCB2	YDR397C	HSV2	P50079	448 aa	Predicted RBP	4.16	□□□□□ -1.74
NCB2	YDR397C	ZDS1	P50111	915 aa	Known RBP	4.16	□□□□□ -1.74
NCB2	YDR397C	SUN4	P53616	420 aa		4.16	□□□□□ -1.74
NCB2	YDR397C	THI21	Q08975	551 aa		4.16	□□□□□ -1.74
NCB2	YDR397C	TUB3	P09734	445 aa	Known RBP	4.15	□□□□□ -1.75
NCB2	YDR397C	ERR1	P0CX10	437 aa		4.15	□□□□□ -1.75
NCB2	YDR397C	ERR2	P0CX11	437 aa		4.15	□□□□□ -1.75
NCB2	YDR397C	RAD53	P22216	821 aa		4.15	□□□□□ -1.75
NCB2	YDR397C	EFT1	P32324	842 aa	Known RBP	4.15	□□□□□ -1.75
NCB2	YDR397C	NGG1	P32494	702 aa		4.15	□□□□□ -1.75
NCB2	YDR397C	CTF13	P35203	478 aa		4.15	□□□□□ -1.75
NCB2	YDR397C	SAP190	P36123	1033 aa		4.15	□□□□□ -1.75
NCB2	YDR397C	CHS7	P38843	316 aa		4.15	□□□□□ -1.75
NCB2	YDR397C	NUP82	P40368	713 aa		4.15	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 25.5 ms