RNA–Protein interactions for RNA: YDR334W

SWR1, Transcript of Swi2/Snf2-related ATPase, yeastyeast

Gene SWR1, Length 4,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWR1YDR334W YDR444WQ04093 687 aa2.72□□□□□ -1.97
SWR1YDR334W TMA64Q04600 565 aaKnown RBP2.72□□□□□ -1.97
SWR1YDR334W RTP1Q12751 981 aa2.72□□□□□ -1.97
SWR1YDR334W KAR3P17119 729 aa2.72□□□□□ -1.97
SWR1YDR334W GRX1P25373 110 aaKnown RBP2.72□□□□□ -1.97
SWR1YDR334W RPL8BP29453 256 aaKnown RBP2.72□□□□□ -1.97
SWR1YDR334W VAC8P39968 578 aa2.72□□□□□ -1.97
SWR1YDR334W SRB7P47822 140 aa2.72□□□□□ -1.97
SWR1YDR334W GDE1Q02979 1223 aa2.72□□□□□ -1.97
SWR1YDR334W FMP25Q08023 583 aa2.72□□□□□ -1.97
SWR1YDR334W NEW1Q08972 1196 aaKnown RBP2.72□□□□□ -1.97
SWR1YDR334W YDL176WQ12027 708 aa2.72□□□□□ -1.97
SWR1YDR334W YEF3P16521 1044 aaKnown RBP2.71□□□□□ -1.98
SWR1YDR334W SAC7P17121 654 aa2.71□□□□□ -1.98
SWR1YDR334W VTC3Q02725 835 aa2.71□□□□□ -1.98
SWR1YDR334W TAF8Q03750 510 aa2.71□□□□□ -1.98
SWR1YDR334W BUL2Q03758 920 aaKnown RBP2.71□□□□□ -1.98
SWR1YDR334W RTT103Q05543 409 aa2.71□□□□□ -1.98
SWR1YDR334W TY1A-LR4P0C2I8 440 aaKnown RBP2.71□□□□□ -1.98
SWR1YDR334W TY1A-DR6P0CX70 440 aa2.71□□□□□ -1.98
SWR1YDR334W TY1A-ER1P0CX71 440 aa2.71□□□□□ -1.98
SWR1YDR334W TY1A-LR2P0CX72 440 aa2.71□□□□□ -1.98
SWR1YDR334W TY1A-PLP0CX73 440 aa2.71□□□□□ -1.98
SWR1YDR334W TY1A-JR1P0CX74 440 aa2.71□□□□□ -1.98
SWR1YDR334W TY1A-LR3P0CX75 440 aa2.71□□□□□ -1.98
SWR1YDR334W TY1A-ML2P0CX76 440 aa2.71□□□□□ -1.98
SWR1YDR334W YHI9P38765 294 aa2.71□□□□□ -1.98
SWR1YDR334W ECM1P39715 212 aa2.71□□□□□ -1.98
SWR1YDR334W MSH4P40965 878 aaPredicted RBP2.71□□□□□ -1.98
SWR1YDR334W XKS1P42826 600 aa2.71□□□□□ -1.98
SWR1YDR334W FAA4P47912 694 aaKnown RBP2.71□□□□□ -1.98
SWR1YDR334W OKP1P53298 406 aa2.71□□□□□ -1.98
SWR1YDR334W TOF1P53840 1238 aa2.71□□□□□ -1.98
SWR1YDR334W NAB6Q03735 1134 aaKnown RBP RIP-Chip data2.71□□□□□ -1.98not detected
SWR1YDR334W EST2Q06163 884 aa2.71□□□□□ -1.98
SWR1YDR334W TY1A-GR1Q12085 440 aa2.71□□□□□ -1.98
SWR1YDR334W YOR131CQ12486 218 aa2.71□□□□□ -1.98
SWR1YDR334W TY1A-PR3Q6Q5H1 440 aaKnown RBP2.71□□□□□ -1.98
SWR1YDR334W MDM12Q92328 271 aa2.71□□□□□ -1.98
SWR1YDR334W TY1A-OLQ92392 440 aaKnown RBP2.71□□□□□ -1.98
SWR1YDR334W GAL11P19659 1081 aa2.71□□□□□ -1.98
SWR1YDR334W NAR1P23503 491 aaKnown RBP2.71□□□□□ -1.98
SWR1YDR334W NOP4P37838 685 aaKnown RBP2.71□□□□□ -1.98
SWR1YDR334W SSZ1P38788 538 aaKnown RBP2.71□□□□□ -1.98
SWR1YDR334W UTP18P40362 594 aaPredicted RBP2.71□□□□□ -1.98
SWR1YDR334W RSM26P47141 266 aa2.71□□□□□ -1.98
SWR1YDR334W VPS20Q04272 221 aa2.71□□□□□ -1.98
SWR1YDR334W ENT2Q05785 613 aa2.71□□□□□ -1.98
SWR1YDR334W MED11Q99278 115 aa2.71□□□□□ -1.98
SWR1YDR334W TUF1P02992 437 aaKnown RBP2.7□□□□□ -1.98
SWR1YDR334W UGA4P32837 571 aa2.7□□□□□ -1.98
SWR1YDR334W PBP2P38151 413 aaKnown RBP RIP-Chip data2.7□□□□□ -1.98not detected
SWR1YDR334W MCX1P38323 520 aaPredicted RBP2.7□□□□□ -1.98
SWR1YDR334W YKE2P52553 114 aa2.7□□□□□ -1.98
SWR1YDR334W SWC4P53201 476 aa2.7□□□□□ -1.98
SWR1YDR334W JJJ1P53863 590 aa2.7□□□□□ -1.98
SWR1YDR334W DID2P69771 204 aa2.7□□□□□ -1.98
SWR1YDR334W SIZ1Q04195 904 aa2.7□□□□□ -1.98
SWR1YDR334W MCM21Q06675 368 aa2.7□□□□□ -1.98
SWR1YDR334W ALE1Q08548 619 aa2.7□□□□□ -1.98
SWR1YDR334W HRK1Q08732 759 aaKnown RBP2.7□□□□□ -1.98
SWR1YDR334W ELG1Q12050 791 aa2.7□□□□□ -1.98
SWR1YDR334W CFT2Q12102 859 aaPredicted RBP2.7□□□□□ -1.98
SWR1YDR334W CDC37P06101 506 aaKnown RBP2.7□□□□□ -1.98
SWR1YDR334W HSP60P19882 572 aaKnown RBP2.7□□□□□ -1.98
SWR1YDR334W SRO9P25567 434 aaKnown RBP2.7□□□□□ -1.98
SWR1YDR334W SEG2P34250 1132 aa2.7□□□□□ -1.98
SWR1YDR334W PNT1P38969 423 aa2.7□□□□□ -1.98
SWR1YDR334W GIP2P40036 548 aa2.7□□□□□ -1.98
SWR1YDR334W YIR007WP40566 764 aa2.7□□□□□ -1.98
SWR1YDR334W VTC2P43585 828 aa2.7□□□□□ -1.98
SWR1YDR334W CCM1P48237 864 aaPredicted RBP2.7□□□□□ -1.98
SWR1YDR334W ALT1P52893 592 aa2.7□□□□□ -1.98
SWR1YDR334W VTI1Q04338 217 aa2.7□□□□□ -1.98
SWR1YDR334W RPN5Q12250 445 aaKnown RBP2.7□□□□□ -1.98
SWR1YDR334W STO1P34160 861 aaKnown RBP2.7□□□□□ -1.98
SWR1YDR334W CBR1P38626 284 aaKnown RBP2.7□□□□□ -1.98
SWR1YDR334W TPO2P53283 614 aa2.7□□□□□ -1.98
SWR1YDR334W TIF35Q04067 274 aaKnown RBP2.7□□□□□ -1.98
SWR1YDR334W RRB1Q04225 511 aaKnown RBP2.7□□□□□ -1.98
SWR1YDR334W TDA5Q06417 326 aaKnown RBP2.7□□□□□ -1.98
SWR1YDR334W OPY2Q06810 360 aa2.7□□□□□ -1.98
SWR1YDR334W NOP56Q12460 504 aaKnown RBP RIP-Chip data2.7□□□□□ -1.98not detected
SWR1YDR334W IKI3Q06706 1349 aaKnown RBP2.7□□□□□ -1.98
SWR1YDR334W AI3P03877 415 aa2.7□□□□□ -1.98
SWR1YDR334W SSB1P11484 613 aaKnown RBP2.7□□□□□ -1.98
SWR1YDR334W SRP40P32583 406 aaPredicted RBP2.7□□□□□ -1.98
SWR1YDR334W NPL6P32832 435 aa2.7□□□□□ -1.98
SWR1YDR334W PGM1P33401 570 aaKnown RBP2.7□□□□□ -1.98
SWR1YDR334W SSB2P40150 613 aaKnown RBP2.7□□□□□ -1.98
SWR1YDR334W PHB1P40961 287 aa2.7□□□□□ -1.98
SWR1YDR334W LSB6P42951 607 aa2.7□□□□□ -1.98
SWR1YDR334W NCE103P53615 221 aa2.7□□□□□ -1.98
SWR1YDR334W HOS3Q02959 697 aaKnown RBP2.7□□□□□ -1.98
SWR1YDR334W TSR1Q07381 788 aaKnown RBP2.7□□□□□ -1.98
SWR1YDR334W YOR223WQ12015 292 aa2.7□□□□□ -1.98
SWR1YDR334W SWI6P09959 803 aa2.69□□□□□ -1.98
SWR1YDR334W PRP6P19735 899 aaPredicted RBP2.69□□□□□ -1.98
SWR1YDR334W MSH2P25847 964 aa2.69□□□□□ -1.98
SWR1YDR334W MAE1P36013 669 aaKnown RBP2.69□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms