RNA–Protein interactions for RNA: YDL091C

UBX3, Transcript of Subunit of the DSC ubiquitin ligase complex, yeastyeast

Gene UBX3, Length 1,368 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBX3YDL091C BDF2Q07442 638 aa4.59□□□□□ -1.67
UBX3YDL091C PUS9Q12069 462 aa4.59□□□□□ -1.67
UBX3YDL091C TOP3P13099 656 aa4.58□□□□□ -1.68
UBX3YDL091C RFA1P22336 621 aaKnown RBP4.58□□□□□ -1.68
UBX3YDL091C SED4P25365 1065 aa4.58□□□□□ -1.68
UBX3YDL091C UBP6P43593 499 aaKnown RBP4.58□□□□□ -1.68
UBX3YDL091C HUL5P53119 910 aa4.58□□□□□ -1.68
UBX3YDL091C HDA1P53973 706 aa4.58□□□□□ -1.68
UBX3YDL091C SSL1Q04673 461 aaPredicted RBP4.58□□□□□ -1.68
UBX3YDL091C ENV7Q12003 364 aa4.58□□□□□ -1.68
UBX3YDL091C LAS17Q12446 633 aa4.58□□□□□ -1.68
UBX3YDL091C PFK1P16861 987 aaKnown RBP4.57□□□□□ -1.68
UBX3YDL091C KAR4P25583 335 aa4.57□□□□□ -1.68
UBX3YDL091C TYE7P33122 291 aaPredicted RBP4.57□□□□□ -1.68
UBX3YDL091C HUL4P40985 892 aa4.57□□□□□ -1.68
UBX3YDL091C MSE1P48525 536 aa4.57□□□□□ -1.68
UBX3YDL091C YKR011CQ02209 353 aa4.57□□□□□ -1.68
UBX3YDL091C NSE3Q05541 303 aa4.57□□□□□ -1.68
UBX3YDL091C YDL124WQ07551 312 aaKnown RBP4.57□□□□□ -1.68
UBX3YDL091C MPH2P0CD99 609 aa4.56□□□□□ -1.68
UBX3YDL091C STI1P15705 589 aaKnown RBP RIP-Chip data4.56□□□□□ -1.68not detected
UBX3YDL091C URA1P28272 314 aaPredicted RBP4.56□□□□□ -1.68
UBX3YDL091C RPD3P32561 433 aa4.56□□□□□ -1.68
UBX3YDL091C GGA2P38817 585 aaKnown RBP4.56□□□□□ -1.68
UBX3YDL091C CTF8P38877 133 aa4.56□□□□□ -1.68
UBX3YDL091C RSP5P39940 809 aaKnown RBP4.56□□□□□ -1.68
UBX3YDL091C SDP1P40479 209 aa4.56□□□□□ -1.68
UBX3YDL091C SLI1P53304 468 aa4.56□□□□□ -1.68
UBX3YDL091C CAN1P04817 590 aa4.55□□□□□ -1.68
UBX3YDL091C BET3P36149 193 aa4.55□□□□□ -1.68
UBX3YDL091C MSS4P38994 779 aa4.55□□□□□ -1.68
UBX3YDL091C YIL108WP40483 696 aaKnown RBP4.55□□□□□ -1.68
UBX3YDL091C SUN4P53616 420 aa4.55□□□□□ -1.68
UBX3YDL091C SLU7Q02775 382 aaKnown RBP4.55□□□□□ -1.68
UBX3YDL091C EMC3P36039 253 aa4.54□□□□□ -1.68
UBX3YDL091C AIM21P40563 679 aa4.54□□□□□ -1.68
UBX3YDL091C CEP3P40969 608 aa4.54□□□□□ -1.68
UBX3YDL091C JSN1P47135 1091 aaKnown RBP RIP-Chip data4.54□□□□□ -1.68not detected
UBX3YDL091C BUL1P48524 976 aa4.54□□□□□ -1.68
UBX3YDL091C YOL098CQ12496 1037 aa4.54□□□□□ -1.68
UBX3YDL091C GAL11P19659 1081 aa4.53□□□□□ -1.68
UBX3YDL091C SEC21P32074 935 aaKnown RBP4.53□□□□□ -1.68
UBX3YDL091C YPT53P36019 220 aa4.53□□□□□ -1.68
UBX3YDL091C OCA5P38738 679 aa4.53□□□□□ -1.68
UBX3YDL091C NIT3P49954 291 aa4.53□□□□□ -1.68
UBX3YDL091C RTA1P53047 317 aa4.53□□□□□ -1.68
UBX3YDL091C YGR283CP53336 341 aaPredicted RBP4.53□□□□□ -1.68
UBX3YDL091C NOG2P53742 486 aaKnown RBP4.53□□□□□ -1.68
UBX3YDL091C KIN4Q01919 800 aa4.53□□□□□ -1.68
UBX3YDL091C CDC53Q12018 815 aaKnown RBP4.53□□□□□ -1.68
UBX3YDL091C RPS9AO13516 197 aaKnown RBP4.53□□□□□ -1.69
UBX3YDL091C TOM70P07213 617 aaKnown RBP4.53□□□□□ -1.69
UBX3YDL091C HRR25P29295 494 aaKnown RBP4.53□□□□□ -1.69
UBX3YDL091C CHS7P38843 316 aa4.53□□□□□ -1.69
UBX3YDL091C GYP8P43570 497 aa4.53□□□□□ -1.69
UBX3YDL091C DAM1P53267 343 aa4.53□□□□□ -1.69
UBX3YDL091C ERG5P54781 538 aa4.53□□□□□ -1.69
UBX3YDL091C AIM39Q08223 395 aa4.53□□□□□ -1.69
UBX3YDL091C PPM2Q08282 695 aa4.53□□□□□ -1.69
UBX3YDL091C TRP4P07285 380 aaPredicted RBP4.52□□□□□ -1.69
UBX3YDL091C TUB3P09734 445 aaKnown RBP4.52□□□□□ -1.69
UBX3YDL091C CAD1P24813 409 aaKnown RBP4.52□□□□□ -1.69
UBX3YDL091C ALG2P43636 503 aa4.52□□□□□ -1.69
UBX3YDL091C CYS3P31373 394 aaKnown RBP4.51□□□□□ -1.69
UBX3YDL091C EFT1P32324 842 aaKnown RBP4.51□□□□□ -1.69
UBX3YDL091C RPN4Q03465 531 aa4.51□□□□□ -1.69
UBX3YDL091C YHR078WP38799 552 aa4.5□□□□□ -1.69
UBX3YDL091C CHZ1P40019 153 aaPredicted RBP4.5□□□□□ -1.69
UBX3YDL091C PUS2P53167 370 aa4.5□□□□□ -1.69
UBX3YDL091C DUS1P53759 423 aaKnown RBP4.5□□□□□ -1.69
UBX3YDL091C CTF4Q01454 927 aa4.5□□□□□ -1.69
UBX3YDL091C ATP25Q03153 612 aa4.5□□□□□ -1.69
UBX3YDL091C PEX19Q07418 342 aa4.5□□□□□ -1.69
UBX3YDL091C HAL9Q12180 1030 aa4.5□□□□□ -1.69
UBX3YDL091C SWM1Q12379 170 aa4.5□□□□□ -1.69
UBX3YDL091C DAL7P21826 554 aa4.49□□□□□ -1.69
UBX3YDL091C SRP40P32583 406 aaPredicted RBP4.49□□□□□ -1.69
UBX3YDL091C CTF13P35203 478 aa4.49□□□□□ -1.69
UBX3YDL091C KTR4P38131 464 aa4.49□□□□□ -1.69
UBX3YDL091C TAD1P53065 400 aa4.49□□□□□ -1.69
UBX3YDL091C REH1Q06709 432 aa4.49□□□□□ -1.69
UBX3YDL091C TRM11Q12463 433 aa4.49□□□□□ -1.69
UBX3YDL091C YOR131CQ12486 218 aa4.49□□□□□ -1.69
UBX3YDL091C SPC29P33419 253 aa4.48□□□□□ -1.69
UBX3YDL091C LRS4Q04087 347 aaKnown RBP4.48□□□□□ -1.69
UBX3YDL091C YLR040CQ07988 224 aa4.48□□□□□ -1.69
UBX3YDL091C PHR1P05066 565 aaKnown RBP RIP-Chip data4.47□□□□□ -1.69not detected
UBX3YDL091C PRP4P20053 465 aaKnown RBP4.47□□□□□ -1.69
UBX3YDL091C ERG4P25340 473 aa4.47□□□□□ -1.69
UBX3YDL091C YCL002CP25565 263 aa4.47□□□□□ -1.69
UBX3YDL091C BUD6P41697 788 aa4.47□□□□□ -1.69
UBX3YDL091C ASI2P53895 289 aa4.47□□□□□ -1.69
UBX3YDL091C YDR514CQ04408 483 aa4.47□□□□□ -1.69
UBX3YDL091C MET7Q08645 548 aa4.47□□□□□ -1.69
UBX3YDL091C THI21Q08975 551 aa4.47□□□□□ -1.69
UBX3YDL091C YOR022CQ12204 715 aa4.47□□□□□ -1.69
UBX3YDL091C GDH3P39708 457 aa4.46□□□□□ -1.7
UBX3YDL091C TY4A-JP47023 414 aa4.46□□□□□ -1.7
UBX3YDL091C HXT16P47185 567 aa4.46□□□□□ -1.7
UBX3YDL091C YOL073CQ08232 322 aa4.46□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 40.1 ms