RNA–Protein interactions for RNA: YCL020W

YCL020W, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeast

Gene YCL020W, Length 1,317 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YCL020W	YCL020W	LRS4	Q04087	347 aa	Known RBP	4.65	□□□□□ -1.67
YCL020W	YCL020W	KCS1	Q12494	1050 aa		4.65	□□□□□ -1.67
YCL020W	YCL020W	YLR358C	O13565	187 aa		4.64	□□□□□ -1.67
YCL020W	YCL020W	DAL7	P21826	554 aa		4.64	□□□□□ -1.67
YCL020W	YCL020W	URA1	P28272	314 aa	Predicted RBP	4.64	□□□□□ -1.67
YCL020W	YCL020W	CTS1	P29029	562 aa		4.64	□□□□□ -1.67
YCL020W	YCL020W	GGA2	P38817	585 aa	Known RBP	4.64	□□□□□ -1.67
YCL020W	YCL020W	GIP4	P39732	760 aa		4.64	□□□□□ -1.67
YCL020W	YCL020W	ALG2	P43636	503 aa		4.64	□□□□□ -1.67
YCL020W	YCL020W	MAL11	P53048	616 aa		4.64	□□□□□ -1.67
YCL020W	YCL020W	NPC2	Q12408	173 aa		4.64	□□□□□ -1.67
YCL020W	YCL020W	MPH2	P0CD99	609 aa		4.63	□□□□□ -1.67
YCL020W	YCL020W	PER1	P25625	357 aa		4.63	□□□□□ -1.67
YCL020W	YCL020W	SHM2	P37291	469 aa	Known RBP	4.63	□□□□□ -1.67
YCL020W	YCL020W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.63	□□□□□ -1.67	not detected
YCL020W	YCL020W	CHA4	P43634	648 aa		4.63	□□□□□ -1.67
YCL020W	YCL020W	TY4A-J	P47023	414 aa		4.63	□□□□□ -1.67
YCL020W	YCL020W	HSV2	P50079	448 aa	Predicted RBP	4.63	□□□□□ -1.67
YCL020W	YCL020W	PHO23	P50947	330 aa		4.63	□□□□□ -1.67
YCL020W	YCL020W	TAD1	P53065	400 aa		4.63	□□□□□ -1.67
YCL020W	YCL020W	YGR283C	P53336	341 aa	Predicted RBP	4.63	□□□□□ -1.67
YCL020W	YCL020W	YKR011C	Q02209	353 aa		4.63	□□□□□ -1.67
YCL020W	YCL020W	NOP12	Q08208	459 aa	Known RBP	4.63	□□□□□ -1.67
YCL020W	YCL020W	UPC2	Q12151	913 aa		4.63	□□□□□ -1.67
YCL020W	YCL020W	RPC82	P32349	654 aa		4.62	□□□□□ -1.67
YCL020W	YCL020W	YKL222C	P35995	705 aa		4.62	□□□□□ -1.67
YCL020W	YCL020W	GDH3	P39708	457 aa		4.62	□□□□□ -1.67
YCL020W	YCL020W	NCS6	P53088	359 aa		4.62	□□□□□ -1.67
YCL020W	YCL020W	ORC1	P54784	914 aa	Predicted RBP	4.62	□□□□□ -1.67
YCL020W	YCL020W	RPS9A	O13516	197 aa	Known RBP	4.61	□□□□□ -1.67
YCL020W	YCL020W	PHO8	P11491	566 aa		4.61	□□□□□ -1.67
YCL020W	YCL020W	RAD53	P22216	821 aa		4.61	□□□□□ -1.67
YCL020W	YCL020W	YCR015C	P25616	317 aa		4.61	□□□□□ -1.67
YCL020W	YCL020W	STE14	P32584	239 aa		4.61	□□□□□ -1.67
YCL020W	YCL020W	TYE7	P33122	291 aa	Predicted RBP	4.61	□□□□□ -1.67
YCL020W	YCL020W	CHZ1	P40019	153 aa	Predicted RBP	4.61	□□□□□ -1.67
YCL020W	YCL020W	URM1	P40554	99 aa	Predicted RBP	4.61	□□□□□ -1.67
YCL020W	YCL020W	SLU7	Q02775	382 aa	Known RBP	4.61	□□□□□ -1.67
YCL020W	YCL020W	HAL9	Q12180	1030 aa		4.61	□□□□□ -1.67
YCL020W	YCL020W	YOR022C	Q12204	715 aa		4.61	□□□□□ -1.67
YCL020W	YCL020W	LAS17	Q12446	633 aa		4.61	□□□□□ -1.67
YCL020W	YCL020W	MEF1	P25039	761 aa		4.6	□□□□□ -1.67
YCL020W	YCL020W	SPC29	P33419	253 aa		4.6	□□□□□ -1.67
YCL020W	YCL020W	EMC3	P36039	253 aa		4.6	□□□□□ -1.67
YCL020W	YCL020W	MSS4	P38994	779 aa		4.6	□□□□□ -1.67
YCL020W	YCL020W	MET7	Q08645	548 aa		4.6	□□□□□ -1.67
YCL020W	YCL020W	CAD1	P24813	409 aa	Known RBP	4.59	□□□□□ -1.67
YCL020W	YCL020W	SED4	P25365	1065 aa		4.59	□□□□□ -1.67
YCL020W	YCL020W	KAR4	P25583	335 aa		4.59	□□□□□ -1.67
YCL020W	YCL020W	CYS3	P31373	394 aa	Known RBP	4.59	□□□□□ -1.67
YCL020W	YCL020W	THI4	P32318	326 aa		4.59	□□□□□ -1.67
YCL020W	YCL020W	NIT3	P49954	291 aa		4.59	□□□□□ -1.67
YCL020W	YCL020W	VPS30	Q02948	557 aa		4.59	□□□□□ -1.67
YCL020W	YCL020W	FBP1	P09201	348 aa		4.58	□□□□□ -1.68
YCL020W	YCL020W	SEC21	P32074	935 aa	Known RBP	4.58	□□□□□ -1.68
YCL020W	YCL020W	MNN10	P50108	393 aa	Known RBP	4.58	□□□□□ -1.68
YCL020W	YCL020W	PUS2	P53167	370 aa		4.58	□□□□□ -1.68
YCL020W	YCL020W	PRP4	P20053	465 aa	Known RBP	4.57	□□□□□ -1.68
YCL020W	YCL020W	SAP190	P36123	1033 aa		4.57	□□□□□ -1.68
YCL020W	YCL020W	DSS1	P39112	969 aa		4.57	□□□□□ -1.68
YCL020W	YCL020W	SDP1	P40479	209 aa		4.57	□□□□□ -1.68
YCL020W	YCL020W	EXG2	P52911	562 aa		4.57	□□□□□ -1.68
YCL020W	YCL020W	RNH70	P53331	553 aa		4.57	□□□□□ -1.68
YCL020W	YCL020W	PRC1	P00729	532 aa		4.56	□□□□□ -1.68
YCL020W	YCL020W	CDC9	P04819	755 aa		4.56	□□□□□ -1.68
YCL020W	YCL020W	HCM1	P25364	564 aa		4.56	□□□□□ -1.68
YCL020W	YCL020W	HXT16	P47185	567 aa		4.56	□□□□□ -1.68
YCL020W	YCL020W	NOG2	P53742	486 aa	Known RBP	4.56	□□□□□ -1.68
YCL020W	YCL020W	DUS1	P53759	423 aa	Known RBP	4.56	□□□□□ -1.68
YCL020W	YCL020W	YDR514C	Q04408	483 aa		4.56	□□□□□ -1.68
YCL020W	YCL020W	ASM4	Q05166	528 aa		4.56	□□□□□ -1.68
YCL020W	YCL020W	RSC3	Q06639	885 aa		4.56	□□□□□ -1.68
YCL020W	YCL020W	YLR125W	Q12138	136 aa		4.56	□□□□□ -1.68
YCL020W	YCL020W	PPG1	P32838	368 aa		4.55	□□□□□ -1.68
YCL020W	YCL020W	ATG19	P35193	415 aa		4.55	□□□□□ -1.68
YCL020W	YCL020W	CTF8	P38877	133 aa		4.55	□□□□□ -1.68
YCL020W	YCL020W	DAM1	P53267	343 aa		4.55	□□□□□ -1.68
YCL020W	YCL020W	CRR1	Q05790	422 aa		4.55	□□□□□ -1.68
YCL020W	YCL020W	TRM13	Q12383	476 aa		4.55	□□□□□ -1.68
YCL020W	YCL020W	TUB3	P09734	445 aa	Known RBP	4.54	□□□□□ -1.68
YCL020W	YCL020W	STE11	P23561	717 aa		4.54	□□□□□ -1.68
YCL020W	YCL020W	VBA3	P25594	458 aa		4.54	□□□□□ -1.68
YCL020W	YCL020W	YHR078W	P38799	552 aa		4.54	□□□□□ -1.68
YCL020W	YCL020W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.54	□□□□□ -1.68	not detected
YCL020W	YCL020W	MRPS35	P53292	345 aa		4.54	□□□□□ -1.68
YCL020W	YCL020W	ALG12	P53730	551 aa		4.54	□□□□□ -1.68
YCL020W	YCL020W	ATP25	Q03153	612 aa		4.54	□□□□□ -1.68
YCL020W	YCL020W	YDR338C	Q05497	695 aa		4.54	□□□□□ -1.68
YCL020W	YCL020W	NTG2	Q08214	380 aa		4.54	□□□□□ -1.68
YCL020W	YCL020W	PMA1	P05030	918 aa	Known RBP	4.53	□□□□□ -1.68
YCL020W	YCL020W	MET6	P05694	767 aa	Known RBP	4.53	□□□□□ -1.68
YCL020W	YCL020W	SAK1	P38990	1142 aa		4.53	□□□□□ -1.68
YCL020W	YCL020W	VHR1	P40522	640 aa		4.53	□□□□□ -1.68
YCL020W	YCL020W	ALY2	P47029	1046 aa		4.53	□□□□□ -1.68
YCL020W	YCL020W	BUL1	P48524	976 aa		4.53	□□□□□ -1.68
YCL020W	YCL020W	NTO1	Q12311	748 aa		4.53	□□□□□ -1.68
YCL020W	YCL020W	YBR182C-A	Q8TGU6	64 aa		4.53	□□□□□ -1.68
YCL020W	YCL020W	PFK1	P16861	987 aa	Known RBP	4.52	□□□□□ -1.69
YCL020W	YCL020W	MSH2	P25847	964 aa		4.52	□□□□□ -1.69
YCL020W	YCL020W	DCG1	P32460	244 aa		4.52	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 38.3 ms