RNA–Protein interactions for RNA: YBR272C

HSM3, Transcript of Proteasome-interacting protein, yeast

Gene HSM3, Length 1,443 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HSM3	YBR272C	PIH1	P38768	344 aa		7.23	□□□□□ -1.25
HSM3	YBR272C	MBP1	P39678	833 aa		7.23	□□□□□ -1.25
HSM3	YBR272C	MVP1	P40959	511 aa	Known RBP	7.23	□□□□□ -1.25
HSM3	YBR272C	VTC4	P47075	721 aa		7.23	□□□□□ -1.25
HSM3	YBR272C	UBP15	P50101	1230 aa		7.23	□□□□□ -1.25
HSM3	YBR272C	YGR273C	P53329	174 aa		7.23	□□□□□ -1.25
HSM3	YBR272C	SPO1	P53541	631 aa		7.23	□□□□□ -1.25
HSM3	YBR272C	DUS1	P53759	423 aa	Known RBP	7.23	□□□□□ -1.25
HSM3	YBR272C	FDC1	Q03034	503 aa		7.23	□□□□□ -1.25
HSM3	YBR272C	DYN3	Q04949	312 aa		7.23	□□□□□ -1.25
HSM3	YBR272C	DON1	Q05610	365 aa		7.23	□□□□□ -1.25
HSM3	YBR272C	MCP2	Q06567	569 aa		7.23	□□□□□ -1.25
HSM3	YBR272C	MLH2	Q07980	695 aa		7.23	□□□□□ -1.25
HSM3	YBR272C	NOP12	Q08208	459 aa	Known RBP	7.23	□□□□□ -1.25
HSM3	YBR272C	RTT10	Q08924	1013 aa		7.23	□□□□□ -1.25
HSM3	YBR272C	YOR289W	Q12012	251 aa	Predicted RBP	7.23	□□□□□ -1.25
HSM3	YBR272C	RSR1	P13856	272 aa		7.22	□□□□□ -1.25
HSM3	YBR272C	KSS1	P14681	368 aa		7.22	□□□□□ -1.25
HSM3	YBR272C	TUP1	P16649	713 aa		7.22	□□□□□ -1.25
HSM3	YBR272C	PWP1	P21304	576 aa	Known RBP	7.22	□□□□□ -1.25
HSM3	YBR272C	JNM1	P36224	373 aa		7.22	□□□□□ -1.25
HSM3	YBR272C	BAP2	P38084	609 aa		7.22	□□□□□ -1.25
HSM3	YBR272C	SOL3	P38858	249 aa		7.22	□□□□□ -1.25
HSM3	YBR272C	MTW1	P39731	289 aa		7.22	□□□□□ -1.25
HSM3	YBR272C	YIL092W	P40497	633 aa		7.22	□□□□□ -1.25
HSM3	YBR272C	GCN20	P43535	752 aa	Known RBP	7.22	□□□□□ -1.25
HSM3	YBR272C	NUP85	P46673	744 aa		7.22	□□□□□ -1.25
HSM3	YBR272C	ALB1	P47019	175 aa	Predicted RBP	7.22	□□□□□ -1.25
HSM3	YBR272C	YGR153W	P48238	217 aa		7.22	□□□□□ -1.25
HSM3	YBR272C	HGH1	P48362	394 aa	Known RBP	7.22	□□□□□ -1.25
HSM3	YBR272C	MIG2	P53035	382 aa		7.22	□□□□□ -1.25
HSM3	YBR272C	ATF2	P53296	535 aa		7.22	□□□□□ -1.25
HSM3	YBR272C	HST1	P53685	503 aa		7.22	□□□□□ -1.25
HSM3	YBR272C	FPK1	P53739	893 aa		7.22	□□□□□ -1.25
HSM3	YBR272C	FYV6	P53913	173 aa		7.22	□□□□□ -1.25
HSM3	YBR272C	UBP2	Q01476	1272 aa		7.22	□□□□□ -1.25
HSM3	YBR272C	GYL1	Q04322	720 aa		7.22	□□□□□ -1.25
HSM3	YBR272C	PGK1	P00560	416 aa	Known RBP	7.21	□□□□□ -1.25
HSM3	YBR272C	GRX1	P25373	110 aa	Known RBP	7.21	□□□□□ -1.25
HSM3	YBR272C	SEC21	P32074	935 aa	Known RBP	7.21	□□□□□ -1.25
HSM3	YBR272C	KRE6	P32486	720 aa		7.21	□□□□□ -1.25
HSM3	YBR272C	PPG1	P32838	368 aa		7.21	□□□□□ -1.25
HSM3	YBR272C	ATP3	P38077	311 aa	Known RBP	7.21	□□□□□ -1.25
HSM3	YBR272C	HSE1	P38753	452 aa		7.21	□□□□□ -1.25
HSM3	YBR272C	YEL023C	P39992	682 aa		7.21	□□□□□ -1.25
HSM3	YBR272C	STB1	P42845	420 aa		7.21	□□□□□ -1.25
HSM3	YBR272C	MON1	P53129	644 aa		7.21	□□□□□ -1.25
HSM3	YBR272C	MDR1	P53258	950 aa		7.21	□□□□□ -1.25
HSM3	YBR272C	HOL1	P53389	586 aa		7.21	□□□□□ -1.25
HSM3	YBR272C	GCR2	Q01722	534 aa		7.21	□□□□□ -1.25
HSM3	YBR272C	TAF11	Q04226	346 aa		7.21	□□□□□ -1.25
HSM3	YBR272C	YLR352W	Q06479	807 aa		7.21	□□□□□ -1.25
HSM3	YBR272C	TSR2	Q06672	205 aa	Known RBP	7.21	□□□□□ -1.25
HSM3	YBR272C	RIM15	P43565	1770 aa		7.2	□□□□□ -1.26
HSM3	YBR272C	REP1	P03871	373 aa		7.2	□□□□□ -1.26
HSM3	YBR272C	GAL1	P04385	528 aa		7.2	□□□□□ -1.26
HSM3	YBR272C	MST1	P07236	462 aa		7.2	□□□□□ -1.26
HSM3	YBR272C	ILS1	P09436	1072 aa	Known RBP	7.2	□□□□□ -1.26
HSM3	YBR272C	GLK1	P17709	500 aa	Known RBP	7.2	□□□□□ -1.26
HSM3	YBR272C	SUI2	P20459	304 aa	Known RBP	7.2	□□□□□ -1.26
HSM3	YBR272C	CLB4	P24871	460 aa		7.2	□□□□□ -1.26
HSM3	YBR272C	RPC53	P25441	422 aa		7.2	□□□□□ -1.26
HSM3	YBR272C	RSC6	P25632	483 aa		7.2	□□□□□ -1.26
HSM3	YBR272C	RPC19	P28000	142 aa	Known RBP	7.2	□□□□□ -1.26
HSM3	YBR272C	YJU2	P28320	278 aa	Predicted RBP	7.2	□□□□□ -1.26
HSM3	YBR272C	HEM3	P28789	327 aa		7.2	□□□□□ -1.26
HSM3	YBR272C	MEI4	P29467	408 aa		7.2	□□□□□ -1.26
HSM3	YBR272C	EUG1	P32474	517 aa		7.2	□□□□□ -1.26
HSM3	YBR272C	SLI15	P38283	698 aa		7.2	□□□□□ -1.26
HSM3	YBR272C	GLO3	P38682	493 aa	Known RBP	7.2	□□□□□ -1.26
HSM3	YBR272C	SBE2	P42223	864 aa	Known RBP	7.2	□□□□□ -1.26
HSM3	YBR272C	YFL066C	P43538	392 aa		7.2	□□□□□ -1.26
HSM3	YBR272C	RET2	P43621	546 aa		7.2	□□□□□ -1.26
HSM3	YBR272C	ATP22	P50273	684 aa	Predicted RBP	7.2	□□□□□ -1.26
HSM3	YBR272C	ATG1	P53104	897 aa		7.2	□□□□□ -1.26
HSM3	YBR272C	YGR067C	P53243	804 aa		7.2	□□□□□ -1.26
HSM3	YBR272C	SVF1	Q05515	481 aa		7.2	□□□□□ -1.26
HSM3	YBR272C	SUB2	Q07478	446 aa	Known RBP	7.2	□□□□□ -1.26
HSM3	YBR272C	GAS4	Q08271	471 aa		7.2	□□□□□ -1.26
HSM3	YBR272C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	7.2	□□□□□ -1.26	not detected
HSM3	YBR272C	GYP5	Q12344	894 aa		7.2	□□□□□ -1.26
HSM3	YBR272C	YOL098C	Q12496	1037 aa		7.2	□□□□□ -1.26
HSM3	YBR272C	ADE8	P04161	214 aa		7.19	□□□□□ -1.26
HSM3	YBR272C	KGD2	P19262	463 aa	Predicted RBP	7.19	□□□□□ -1.26
HSM3	YBR272C	RAD27	P26793	382 aa		7.19	□□□□□ -1.26
HSM3	YBR272C	STO1	P34160	861 aa	Known RBP	7.19	□□□□□ -1.26
HSM3	YBR272C	KIC1	P38692	1080 aa		7.19	□□□□□ -1.26
HSM3	YBR272C	GEM1	P39722	662 aa		7.19	□□□□□ -1.26
HSM3	YBR272C	ZRG8	P40021	1076 aa		7.19	□□□□□ -1.26
HSM3	YBR272C	PRP31	P49704	494 aa	Predicted RBP	7.19	□□□□□ -1.26
HSM3	YBR272C	ALF1	P53904	254 aa		7.19	□□□□□ -1.26
HSM3	YBR272C	HAS1	Q03532	505 aa	Known RBP	7.19	□□□□□ -1.26
HSM3	YBR272C	SYF1	Q04048	859 aa	Predicted RBP	7.19	□□□□□ -1.26
HSM3	YBR272C	VIP1	Q06685	1146 aa	Known RBP	7.19	□□□□□ -1.26
HSM3	YBR272C	MCD1	Q12158	566 aa		7.19	□□□□□ -1.26
HSM3	YBR272C	GPR1	Q12361	961 aa		7.19	□□□□□ -1.26
HSM3	YBR272C	AUS1	Q08409	1394 aa		7.19	□□□□□ -1.26
HSM3	YBR272C	CDC16	P09798	840 aa		7.18	□□□□□ -1.26
HSM3	YBR272C	DSF1	P0CX08	502 aa		7.18	□□□□□ -1.26
HSM3	YBR272C	YNR073C	P0CX09	502 aa		7.18	□□□□□ -1.26

Retrieved 100 of 5,963 RNA–protein pairs in 26.5 ms