RNA–Protein interactions for RNA: YBR260C

RGD1, Transcript of GTPase-activating protein (RhoGAP) for Rho3p and Rho4p, yeastyeast

Gene RGD1, Length 2,001 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RGD1YBR260C PTA1Q01329 785 aaPredicted RBP6.48□□□□□ -1.37
RGD1YBR260C SLU7Q02775 382 aaKnown RBP6.48□□□□□ -1.37
RGD1YBR260C FIN1Q03898 291 aa6.48□□□□□ -1.37
RGD1YBR260C PSR2Q07949 397 aa6.48□□□□□ -1.37
RGD1YBR260C RUP1Q12242 671 aa6.48□□□□□ -1.37
RGD1YBR260C CLN3P13365 580 aa6.47□□□□□ -1.37
RGD1YBR260C YAK1P14680 807 aa6.47□□□□□ -1.37
RGD1YBR260C MRPL25P23369 157 aa6.47□□□□□ -1.37
RGD1YBR260C SEC21P32074 935 aaKnown RBP6.47□□□□□ -1.37
RGD1YBR260C JNM1P36224 373 aa6.47□□□□□ -1.37
RGD1YBR260C RPN10P38886 268 aaKnown RBP6.47□□□□□ -1.37
RGD1YBR260C NOP9P47077 666 aaKnown RBP6.47□□□□□ -1.37
RGD1YBR260C CUE3P53137 624 aaKnown RBP6.47□□□□□ -1.37
RGD1YBR260C DIG1Q03063 452 aaKnown RBP6.47□□□□□ -1.37
RGD1YBR260C SHE9Q04172 456 aa6.47□□□□□ -1.37
RGD1YBR260C DON1Q05610 365 aa6.47□□□□□ -1.37
RGD1YBR260C CDC6P09119 513 aa6.47□□□□□ -1.37
RGD1YBR260C MPH2P0CD99 609 aa6.47□□□□□ -1.37
RGD1YBR260C VMA4P22203 233 aaKnown RBP6.47□□□□□ -1.37
RGD1YBR260C NAM7P30771 971 aaKnown RBP6.47□□□□□ -1.37
RGD1YBR260C NUP120P35729 1037 aa6.47□□□□□ -1.37
RGD1YBR260C PCF11P39081 626 aaPredicted RBP6.47□□□□□ -1.37
RGD1YBR260C SPC72P39723 622 aa6.47□□□□□ -1.37
RGD1YBR260C AIP1P46680 615 aaKnown RBP6.47□□□□□ -1.37
RGD1YBR260C YGL176CP46945 554 aa6.47□□□□□ -1.37
RGD1YBR260C RNR4P49723 345 aaKnown RBP6.47□□□□□ -1.37
RGD1YBR260C NOP15P53927 220 aaPredicted RBP6.47□□□□□ -1.37
RGD1YBR260C UBP3Q01477 912 aaKnown RBP RIP-Chip data6.47□□□□□ -1.37not detected
RGD1YBR260C MMT1Q03218 510 aa6.47□□□□□ -1.37
RGD1YBR260C ERB1Q04660 807 aaKnown RBP6.47□□□□□ -1.37
RGD1YBR260C ARP9Q05123 467 aa6.47□□□□□ -1.37
RGD1YBR260C MCP2Q06567 569 aa6.47□□□□□ -1.37
RGD1YBR260C APC2Q12440 853 aa6.47□□□□□ -1.37
RGD1YBR260C TRM11Q12463 433 aa6.47□□□□□ -1.37
RGD1YBR260C POL3P15436 1097 aa6.46□□□□□ -1.38
RGD1YBR260C POL30P15873 258 aaKnown RBP6.46□□□□□ -1.38
RGD1YBR260C MSB1P21339 1137 aaKnown RBP6.46□□□□□ -1.38
RGD1YBR260C MSH2P25847 964 aa6.46□□□□□ -1.38
RGD1YBR260C KDX1P36005 433 aa6.46□□□□□ -1.38
RGD1YBR260C YKR078WP36158 585 aaKnown RBP6.46□□□□□ -1.38
RGD1YBR260C EPS1P40557 701 aa6.46□□□□□ -1.38
RGD1YBR260C EMW1P42842 904 aaKnown RBP6.46□□□□□ -1.38
RGD1YBR260C ATP22P50273 684 aaPredicted RBP6.46□□□□□ -1.38
RGD1YBR260C CPR6P53691 371 aaKnown RBP6.46□□□□□ -1.38
RGD1YBR260C CEF1Q03654 590 aaPredicted RBP6.46□□□□□ -1.38
RGD1YBR260C GTB1Q04924 702 aa6.46□□□□□ -1.38
RGD1YBR260C VIP1Q06685 1146 aaKnown RBP6.46□□□□□ -1.38
RGD1YBR260C YLR125WQ12138 136 aa6.46□□□□□ -1.38
RGD1YBR260C NCR1Q12200 1170 aa6.46□□□□□ -1.38
RGD1YBR260C TUS1Q06412 1307 aa6.46□□□□□ -1.38
RGD1YBR260C RSF2P46974 1380 aa6.46□□□□□ -1.38
RGD1YBR260C RPL22AP05749 121 aaKnown RBP6.45□□□□□ -1.38
RGD1YBR260C SUP45P12385 437 aaKnown RBP6.45□□□□□ -1.38
RGD1YBR260C GCN3P14741 305 aa6.45□□□□□ -1.38
RGD1YBR260C OSM1P21375 501 aaKnown RBP6.45□□□□□ -1.38
RGD1YBR260C RAM2P29703 316 aa6.45□□□□□ -1.38
RGD1YBR260C EFT1P32324 842 aaKnown RBP6.45□□□□□ -1.38
RGD1YBR260C HXT1P32465 570 aa6.45□□□□□ -1.38
RGD1YBR260C GDA1P32621 518 aa6.45□□□□□ -1.38
RGD1YBR260C UBC6P33296 250 aaPredicted RBP6.45□□□□□ -1.38
RGD1YBR260C YBL055CP34220 418 aaPredicted RBP6.45□□□□□ -1.38
RGD1YBR260C TBS1P38114 1094 aa6.45□□□□□ -1.38
RGD1YBR260C ALG5P40350 334 aa6.45□□□□□ -1.38
RGD1YBR260C RIC1P40395 1056 aa6.45□□□□□ -1.38
RGD1YBR260C MSN5P52918 1224 aa6.45□□□□□ -1.38
RGD1YBR260C YGR016WP53209 190 aa6.45□□□□□ -1.38
RGD1YBR260C YDR341CQ05506 607 aaKnown RBP6.45□□□□□ -1.38
RGD1YBR260C FRA1Q07825 749 aa6.45□□□□□ -1.38
RGD1YBR260C ZRT2Q12436 422 aa6.45□□□□□ -1.38
RGD1YBR260C SSK22P25390 1331 aaPredicted RBP6.45□□□□□ -1.38
RGD1YBR260C RPL17AP05740 184 aaKnown RBP6.45□□□□□ -1.38
RGD1YBR260C HEM1P09950 548 aaPredicted RBP6.45□□□□□ -1.38
RGD1YBR260C PFK2P16862 959 aaKnown RBP RIP-Chip data6.45□□□□□ -1.38not detected
RGD1YBR260C KGD2P19262 463 aaPredicted RBP6.45□□□□□ -1.38
RGD1YBR260C URE2P23202 354 aaKnown RBP6.45□□□□□ -1.38
RGD1YBR260C CLB2P24869 491 aa6.45□□□□□ -1.38
RGD1YBR260C HCS1P34243 683 aa6.45□□□□□ -1.38
RGD1YBR260C YKR015CP36111 568 aa6.45□□□□□ -1.38
RGD1YBR260C SWC5P38326 303 aa6.45□□□□□ -1.38
RGD1YBR260C YBR242WP38331 238 aa6.45□□□□□ -1.38
RGD1YBR260C HAM1P47119 197 aaKnown RBP6.45□□□□□ -1.38
RGD1YBR260C DAN4P47179 1161 aa6.45□□□□□ -1.38
RGD1YBR260C MRM2P53123 320 aa6.45□□□□□ -1.38
RGD1YBR260C DRN1P53255 507 aaKnown RBP6.45□□□□□ -1.38
RGD1YBR260C FAR11P53917 953 aa6.45□□□□□ -1.38
RGD1YBR260C ACL4Q03771 387 aa6.45□□□□□ -1.38
RGD1YBR260C ECI1Q05871 280 aa6.45□□□□□ -1.38
RGD1YBR260C CSC1Q06538 782 aa6.45□□□□□ -1.38
RGD1YBR260C GET4Q12125 312 aa6.45□□□□□ -1.38
RGD1YBR260C SPO21Q12411 609 aa6.45□□□□□ -1.38
RGD1YBR260C SSC1P0CS90 654 aaKnown RBP6.44□□□□□ -1.38
RGD1YBR260C SEC6P32844 805 aa6.44□□□□□ -1.38
RGD1YBR260C SMC1P32908 1225 aa6.44□□□□□ -1.38
RGD1YBR260C YKL222CP35995 705 aa6.44□□□□□ -1.38
RGD1YBR260C UBP12P39538 1254 aa6.44□□□□□ -1.38
RGD1YBR260C AST2P39945 430 aaKnown RBP6.44□□□□□ -1.38
RGD1YBR260C SIP5P40210 489 aaKnown RBP6.44□□□□□ -1.38
RGD1YBR260C JEM1P40358 645 aa6.44□□□□□ -1.38
RGD1YBR260C NMD5P46970 1048 aa6.44□□□□□ -1.38
RGD1YBR260C FMP33P46998 180 aa6.44□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 89.5 ms