RNA–Protein interactions for RNA: YBR170C

NPL4, Transcript of Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase, yeastyeast

Gene NPL4, Length 1,743 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NPL4YBR170C RPN3P40016 523 aaKnown RBP5.31□□□□□ -1.56
NPL4YBR170C PIP2P52960 996 aa5.31□□□□□ -1.56
NPL4YBR170C UBX4P54730 416 aa5.31□□□□□ -1.56
NPL4YBR170C MET14Q02196 202 aa5.31□□□□□ -1.56
NPL4YBR170C YLR257WQ06146 321 aaKnown RBP5.31□□□□□ -1.56
NPL4YBR170C MET7Q08645 548 aa5.31□□□□□ -1.56
NPL4YBR170C HOG1P32485 435 aa5.3□□□□□ -1.56
NPL4YBR170C TSL1P38427 1098 aaKnown RBP5.3□□□□□ -1.56
NPL4YBR170C GZF3P42944 551 aaKnown RBP5.3□□□□□ -1.56
NPL4YBR170C KIP3P53086 805 aaKnown RBP5.3□□□□□ -1.56
NPL4YBR170C TMA64Q04600 565 aaKnown RBP5.3□□□□□ -1.56
NPL4YBR170C ATG33Q06485 197 aa5.3□□□□□ -1.56
NPL4YBR170C GCD1P09032 578 aaPredicted RBP5.29□□□□□ -1.56
NPL4YBR170C PGI1P12709 554 aaKnown RBP5.29□□□□□ -1.56
NPL4YBR170C AEP2P22136 580 aa5.29□□□□□ -1.56
NPL4YBR170C HSP78P33416 811 aa5.29□□□□□ -1.56
NPL4YBR170C NIT2P47016 307 aa5.29□□□□□ -1.56
NPL4YBR170C AIM14P53109 570 aa5.29□□□□□ -1.56
NPL4YBR170C SNP1Q00916 300 aaPredicted RBP5.29□□□□□ -1.56
NPL4YBR170C YOR223WQ12015 292 aa5.29□□□□□ -1.56
NPL4YBR170C GIN4Q12263 1142 aa5.29□□□□□ -1.56
NPL4YBR170C GAL1P04385 528 aa5.28□□□□□ -1.56
NPL4YBR170C GAS1P22146 559 aaKnown RBP5.28□□□□□ -1.56
NPL4YBR170C NNK1P36003 928 aa5.28□□□□□ -1.56
NPL4YBR170C UGA2P38067 497 aa5.28□□□□□ -1.56
NPL4YBR170C YFL054CP43549 646 aa5.28□□□□□ -1.56
NPL4YBR170C YJL045WP47052 634 aa5.28□□□□□ -1.56
NPL4YBR170C GYP7P48365 746 aa5.28□□□□□ -1.56
NPL4YBR170C DOT1Q04089 582 aaKnown RBP5.28□□□□□ -1.56
NPL4YBR170C ESC8Q08119 714 aa5.28□□□□□ -1.56
NPL4YBR170C HMG1P12683 1054 aa5.28□□□□□ -1.56
NPL4YBR170C PER1P25625 357 aa5.28□□□□□ -1.56
NPL4YBR170C YKR078WP36158 585 aaKnown RBP5.28□□□□□ -1.56
NPL4YBR170C NMD3P38861 518 aaKnown RBP5.28□□□□□ -1.56
NPL4YBR170C GPP2P40106 250 aaKnown RBP5.28□□□□□ -1.56
NPL4YBR170C NIT3P49954 291 aa5.28□□□□□ -1.56
NPL4YBR170C PBP1P53297 722 aaKnown RBP5.28□□□□□ -1.56
NPL4YBR170C YDR514CQ04408 483 aa5.28□□□□□ -1.56
NPL4YBR170C GUP2Q08929 609 aa5.28□□□□□ -1.56
NPL4YBR170C YLL058WQ12198 575 aa5.28□□□□□ -1.56
NPL4YBR170C SMY2P32909 740 aaKnown RBP5.27□□□□□ -1.57
NPL4YBR170C MMM1P41800 426 aa5.27□□□□□ -1.57
NPL4YBR170C MNN11P46985 422 aaKnown RBP5.27□□□□□ -1.57
NPL4YBR170C SPC105P53148 917 aa5.27□□□□□ -1.57
NPL4YBR170C HOS3Q02959 697 aaKnown RBP5.27□□□□□ -1.57
NPL4YBR170C MDM38Q08179 573 aa5.27□□□□□ -1.57
NPL4YBR170C HRK1Q08732 759 aaKnown RBP5.27□□□□□ -1.57
NPL4YBR170C PTP2P29461 750 aa5.26□□□□□ -1.57
NPL4YBR170C DAL3P32459 195 aa5.26□□□□□ -1.57
NPL4YBR170C NIC96P34077 839 aa5.26□□□□□ -1.57
NPL4YBR170C NPP2P39997 493 aa5.26□□□□□ -1.57
NPL4YBR170C YKE2P52553 114 aa5.26□□□□□ -1.57
NPL4YBR170C MTC3P53077 123 aa5.26□□□□□ -1.57
NPL4YBR170C YDR338CQ05497 695 aa5.26□□□□□ -1.57
NPL4YBR170C SNF5P18480 905 aa5.26□□□□□ -1.57
NPL4YBR170C RPA135P22138 1203 aaKnown RBP5.26□□□□□ -1.57
NPL4YBR170C CDC48P25694 835 aaKnown RBP5.26□□□□□ -1.57
NPL4YBR170C YSC84P32793 468 aa5.26□□□□□ -1.57
NPL4YBR170C YRB30P53107 440 aaPredicted RBP5.26□□□□□ -1.57
NPL4YBR170C NHX1Q04121 633 aa5.26□□□□□ -1.57
NPL4YBR170C RRP6Q12149 733 aaKnown RBP5.26□□□□□ -1.57
NPL4YBR170C RMP1Q12530 201 aa5.26□□□□□ -1.57
NPL4YBR170C BI4P03879 638 aa5.25□□□□□ -1.57
NPL4YBR170C MPH2P0CD99 609 aa5.25□□□□□ -1.57
NPL4YBR170C MIH1P23748 554 aa5.25□□□□□ -1.57
NPL4YBR170C GIC1P38785 314 aa5.25□□□□□ -1.57
NPL4YBR170C RRP8P38961 392 aaKnown RBP5.25□□□□□ -1.57
NPL4YBR170C ERP2P39704 215 aa5.25□□□□□ -1.57
NPL4YBR170C YER158CP40095 573 aa5.25□□□□□ -1.57
NPL4YBR170C CCT5P40413 562 aaKnown RBP5.25□□□□□ -1.57
NPL4YBR170C RSC8P43609 557 aaKnown RBP5.25□□□□□ -1.57
NPL4YBR170C CIT3P43635 486 aa5.25□□□□□ -1.57
NPL4YBR170C HXT16P47185 567 aa5.25□□□□□ -1.57
NPL4YBR170C REH1Q06709 432 aa5.25□□□□□ -1.57
NPL4YBR170C DID4P36108 232 aa5.24□□□□□ -1.57
NPL4YBR170C GPT2P36148 743 aa5.24□□□□□ -1.57
NPL4YBR170C BIT2P38346 545 aa5.24□□□□□ -1.57
NPL4YBR170C YGR153WP48238 217 aa5.24□□□□□ -1.57
NPL4YBR170C TNA1P53322 534 aa5.24□□□□□ -1.57
NPL4YBR170C ECM9Q02202 377 aa5.24□□□□□ -1.57
NPL4YBR170C SRT1Q03175 343 aa5.24□□□□□ -1.57
NPL4YBR170C PHM6Q05637 104 aa5.24□□□□□ -1.57
NPL4YBR170C MLC2Q06580 163 aa5.24□□□□□ -1.57
NPL4YBR170C KCC4P25389 1037 aa5.23□□□□□ -1.57
NPL4YBR170C CCR4P31384 837 aaKnown RBP5.23□□□□□ -1.57
NPL4YBR170C HEM12P32347 362 aaPredicted RBP5.23□□□□□ -1.57
NPL4YBR170C RPN10P38886 268 aaKnown RBP5.23□□□□□ -1.57
NPL4YBR170C RET2P43621 546 aa5.23□□□□□ -1.57
NPL4YBR170C PUS7Q08647 676 aaKnown RBP5.23□□□□□ -1.57
NPL4YBR170C MRS6P32864 603 aaKnown RBP5.23□□□□□ -1.57
NPL4YBR170C YKL133CP36066 463 aa5.23□□□□□ -1.57
NPL4YBR170C RIM4P38741 713 aa5.23□□□□□ -1.57
NPL4YBR170C DOT6P40059 670 aaKnown RBP5.23□□□□□ -1.57
NPL4YBR170C TAD1P53065 400 aa5.23□□□□□ -1.57
NPL4YBR170C TPP1Q03796 238 aa5.23□□□□□ -1.57
NPL4YBR170C COG4Q06096 861 aa5.23□□□□□ -1.57
NPL4YBR170C RCL1Q08096 367 aaPredicted RBP5.23□□□□□ -1.57
NPL4YBR170C YOR059CQ08448 450 aaKnown RBP5.23□□□□□ -1.57
NPL4YBR170C FUN30P31380 1131 aa5.22□□□□□ -1.57
NPL4YBR170C WHI3P34761 661 aaKnown RBP5.22□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 19 ms