RNA–Protein interactions for RNA: YBL078C

ATG8, Transcript of Component of autophagosomes and Cvt vesicles, yeastyeast

Gene ATG8, Length 354 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG8YBL078C CDC9P04819 755 aa5.12□□□□□ -1.59
ATG8YBL078C MPH2P0CD99 609 aa5.12□□□□□ -1.59
ATG8YBL078C RAD18P10862 487 aa5.12□□□□□ -1.59
ATG8YBL078C PUB1P32588 453 aaKnown RBP RIP-Chip data5.12□□□□□ -1.59 RIP-Chip
ATG8YBL078C MRS6P32864 603 aaKnown RBP5.12□□□□□ -1.59
ATG8YBL078C LIP5P32875 414 aa5.12□□□□□ -1.59
ATG8YBL078C DOM34P33309 386 aa5.12□□□□□ -1.59
ATG8YBL078C SHU2P38957 223 aa5.12□□□□□ -1.59
ATG8YBL078C MET13P53128 600 aa5.12□□□□□ -1.59
ATG8YBL078C UTP22P53254 1237 aaPredicted RBP5.12□□□□□ -1.59
ATG8YBL078C YDR306CQ06640 478 aa5.12□□□□□ -1.59
ATG8YBL078C YPR071WQ12346 211 aa5.12□□□□□ -1.59
ATG8YBL078C PHR1P05066 565 aaKnown RBP RIP-Chip data5.11□□□□□ -1.59not detected
ATG8YBL078C TY1A-LR4P0C2I8 440 aaKnown RBP5.11□□□□□ -1.59
ATG8YBL078C TY1A-DR6P0CX70 440 aa5.11□□□□□ -1.59
ATG8YBL078C TY1A-ER1P0CX71 440 aa5.11□□□□□ -1.59
ATG8YBL078C TY1A-LR2P0CX72 440 aa5.11□□□□□ -1.59
ATG8YBL078C TY1A-PLP0CX73 440 aa5.11□□□□□ -1.59
ATG8YBL078C TY1A-JR1P0CX74 440 aa5.11□□□□□ -1.59
ATG8YBL078C TY1A-LR3P0CX75 440 aa5.11□□□□□ -1.59
ATG8YBL078C TY1A-ML2P0CX76 440 aa5.11□□□□□ -1.59
ATG8YBL078C DBP5P20449 482 aaKnown RBP5.11□□□□□ -1.59
ATG8YBL078C HSP78P33416 811 aa5.11□□□□□ -1.59
ATG8YBL078C GPT2P36148 743 aa5.11□□□□□ -1.59
ATG8YBL078C EXO84P38261 753 aa5.11□□□□□ -1.59
ATG8YBL078C SIP5P40210 489 aaKnown RBP5.11□□□□□ -1.59
ATG8YBL078C CNN1P43618 361 aa5.11□□□□□ -1.59
ATG8YBL078C MEC3Q02574 474 aa5.11□□□□□ -1.59
ATG8YBL078C DOT1Q04089 582 aaKnown RBP5.11□□□□□ -1.59
ATG8YBL078C TY1A-GR1Q12085 440 aa5.11□□□□□ -1.59
ATG8YBL078C TY1A-PR3Q6Q5H1 440 aaKnown RBP5.11□□□□□ -1.59
ATG8YBL078C TY1A-OLQ92392 440 aaKnown RBP5.11□□□□□ -1.59
ATG8YBL078C GDB1Q06625 1536 aa5.11□□□□□ -1.59
ATG8YBL078C SCP160P06105 1222 aaKnown RBP RIP-Chip data5.1□□□□□ -1.59not detected
ATG8YBL078C SRD1P09007 221 aa5.1□□□□□ -1.59
ATG8YBL078C APA1P16550 321 aaKnown RBP5.1□□□□□ -1.59
ATG8YBL078C PRP19P32523 503 aaKnown RBP5.1□□□□□ -1.59
ATG8YBL078C MFT1P33441 392 aaKnown RBP5.1□□□□□ -1.59
ATG8YBL078C YKL077WP36081 392 aa5.1□□□□□ -1.59
ATG8YBL078C YJR096WP47137 282 aa5.1□□□□□ -1.59
ATG8YBL078C CTH1P47976 325 aa5.1□□□□□ -1.59
ATG8YBL078C BRE4Q07660 1125 aa5.1□□□□□ -1.59
ATG8YBL078C TY3B-GQ99315 1547 aa5.09□□□□□ -1.59
ATG8YBL078C NUP157P40064 1391 aaKnown RBP5.09□□□□□ -1.59
ATG8YBL078C PTP2P29461 750 aa5.09□□□□□ -1.59
ATG8YBL078C AAR2P32357 355 aaPredicted RBP5.09□□□□□ -1.59
ATG8YBL078C NIC96P34077 839 aa5.09□□□□□ -1.59
ATG8YBL078C PET10P36139 283 aa5.09□□□□□ -1.59
ATG8YBL078C TRZ1P36159 838 aaPredicted RBP5.09□□□□□ -1.59
ATG8YBL078C RPT2P40327 437 aaKnown RBP5.09□□□□□ -1.59
ATG8YBL078C MMM1P41800 426 aa5.09□□□□□ -1.59
ATG8YBL078C ALG2P43636 503 aa5.09□□□□□ -1.59
ATG8YBL078C ESF2P53743 316 aaKnown RBP5.09□□□□□ -1.59
ATG8YBL078C SPO14P36126 1683 aa5.08□□□□□ -1.6
ATG8YBL078C PDR10P51533 1564 aa5.08□□□□□ -1.6
ATG8YBL078C DRS2P39524 1355 aa5.08□□□□□ -1.6
ATG8YBL078C BNI1P41832 1953 aa5.08□□□□□ -1.6
ATG8YBL078C SFL1P20134 766 aa5.08□□□□□ -1.6
ATG8YBL078C PCL2P25693 308 aa5.08□□□□□ -1.6
ATG8YBL078C DAL3P32459 195 aa5.08□□□□□ -1.6
ATG8YBL078C REI1P38344 393 aaPredicted RBP5.08□□□□□ -1.6
ATG8YBL078C NEM1P38757 446 aa5.08□□□□□ -1.6
ATG8YBL078C YAP1801P38856 637 aa5.08□□□□□ -1.6
ATG8YBL078C MPH1P40562 993 aa5.08□□□□□ -1.6
ATG8YBL078C SLS1P42900 643 aa5.08□□□□□ -1.6
ATG8YBL078C GUS1P46655 708 aaKnown RBP RIP-Chip data5.08□□□□□ -1.6not detected
ATG8YBL078C UTP5Q04177 643 aaKnown RBP5.08□□□□□ -1.6
ATG8YBL078C ERP4Q12450 207 aa5.08□□□□□ -1.6
ATG8YBL078C IQG1Q12280 1495 aa5.07□□□□□ -1.6
ATG8YBL078C IKI3Q06706 1349 aaKnown RBP5.07□□□□□ -1.6
ATG8YBL078C MLS1P30952 554 aa5.07□□□□□ -1.6
ATG8YBL078C SSH4P32343 579 aa5.07□□□□□ -1.6
ATG8YBL078C AFG2P32794 780 aa5.07□□□□□ -1.6
ATG8YBL078C WHI3P34761 661 aaKnown RBP5.07□□□□□ -1.6
ATG8YBL078C ADD66P36040 267 aa5.07□□□□□ -1.6
ATG8YBL078C KTR4P38131 464 aa5.07□□□□□ -1.6
ATG8YBL078C ERT1P38140 529 aa5.07□□□□□ -1.6
ATG8YBL078C IES1P43579 692 aa5.07□□□□□ -1.6
ATG8YBL078C CIT3P43635 486 aa5.07□□□□□ -1.6
ATG8YBL078C MDM1Q01846 1127 aa5.07□□□□□ -1.6
ATG8YBL078C ALG6Q12001 544 aaKnown RBP5.07□□□□□ -1.6
ATG8YBL078C BUD3P25558 1636 aa5.07□□□□□ -1.6
ATG8YBL078C NUP170P38181 1502 aa5.07□□□□□ -1.6
ATG8YBL078C AEP2P22136 580 aa5.06□□□□□ -1.6
ATG8YBL078C KCC4P25389 1037 aa5.06□□□□□ -1.6
ATG8YBL078C PPH3P32345 308 aa5.06□□□□□ -1.6
ATG8YBL078C NFU1P32860 256 aa5.06□□□□□ -1.6
ATG8YBL078C SPC29P33419 253 aa5.06□□□□□ -1.6
ATG8YBL078C PTH2P34222 208 aa5.06□□□□□ -1.6
ATG8YBL078C ARL1P38116 183 aaKnown RBP5.06□□□□□ -1.6
ATG8YBL078C RIM4P38741 713 aa5.06□□□□□ -1.6
ATG8YBL078C OAF1P39720 1047 aaPredicted RBP5.06□□□□□ -1.6
ATG8YBL078C HOS4P40480 1083 aa5.06□□□□□ -1.6
ATG8YBL078C RSC8P43609 557 aaKnown RBP5.06□□□□□ -1.6
ATG8YBL078C NIT2P47016 307 aa5.06□□□□□ -1.6
ATG8YBL078C HNT2P49775 206 aa5.06□□□□□ -1.6
ATG8YBL078C PBP1P53297 722 aaKnown RBP5.06□□□□□ -1.6
ATG8YBL078C YNR063WP53749 607 aa5.06□□□□□ -1.6
ATG8YBL078C DUS3Q06053 668 aaKnown RBP5.06□□□□□ -1.6
ATG8YBL078C GUD1Q07729 489 aa5.06□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms