RNA–Protein interactions for RNA: ENST00000288599.9

NCOA1-201, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCOA1, Length 6,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-201ENST00000288599 SLC8A3P57103 927 aa5.03□□□□□ -1.6
NCOA1-201ENST00000288599 U2AF1Q01081 240 aaKnown RBP eCLIP5.03□□□□□ -1.6
NCOA1-201ENST00000288599 TBCCQ15814 346 aa5.03□□□□□ -1.6
NCOA1-201ENST00000288599 LRRC23Q53EV4 343 aaPredicted RBP5.03□□□□□ -1.6
NCOA1-201ENST00000288599 TOM1L2Q6ZVM7 507 aa5.03□□□□□ -1.6
NCOA1-201ENST00000288599 ENGASEQ8NFI3 743 aa5.03□□□□□ -1.6
NCOA1-201ENST00000288599 LAMC1P11047 1609 aa5.03□□□□□ -1.6
NCOA1-201ENST00000288599 ERCC6L2Q5T890 1561 aa5.03□□□□□ -1.6
NCOA1-201ENST00000288599 RNF17Q9BXT8 1623 aaKnown RBP5.03□□□□□ -1.6
NCOA1-201ENST00000288599 UBXN8O00124 270 aa5.03□□□□□ -1.6
NCOA1-201ENST00000288599 ELL2O00472 640 aaPredicted RBP5.03□□□□□ -1.6
NCOA1-201ENST00000288599 PHLDB2Q86SQ0 1253 aa5.03□□□□□ -1.6
NCOA1-201ENST00000288599 OXCT2Q9BYC2 517 aaPredicted RBP5.03□□□□□ -1.6
NCOA1-201ENST00000288599 UBAP1LF5GYI3 381 aa5.03□□□□□ -1.61
NCOA1-201ENST00000288599 GNL1P36915 607 aaPredicted RBP5.03□□□□□ -1.61
NCOA1-201ENST00000288599 MAP7D1Q3KQU3 841 aa5.03□□□□□ -1.61
NCOA1-201ENST00000288599 CCDC157Q569K6 752 aa5.03□□□□□ -1.61
NCOA1-201ENST00000288599 CYB5RLQ6IPT4 315 aa5.03□□□□□ -1.61
NCOA1-201ENST00000288599 HACE1Q8IYU2 909 aa5.03□□□□□ -1.61
NCOA1-201ENST00000288599 NECTIN2Q92692 538 aa5.03□□□□□ -1.61
NCOA1-201ENST00000288599 BICD1Q96G01 975 aa5.03□□□□□ -1.61
NCOA1-201ENST00000288599 PRKRIP1Q9H875 184 aaPredicted RBP5.03□□□□□ -1.61
NCOA1-201ENST00000288599 TTC12Q9H892 705 aaPredicted RBP5.03□□□□□ -1.61
NCOA1-201ENST00000288599 VWDEQ8N2E2 1590 aa5.02□□□□□ -1.61
NCOA1-201ENST00000288599 KIF7Q2M1P5 1343 aa5.02□□□□□ -1.61
NCOA1-201ENST00000288599 SLC9A5Q14940 896 aa5.02□□□□□ -1.61
NCOA1-201ENST00000288599 IQCA1Q86XH1 822 aa5.02□□□□□ -1.61
NCOA1-201ENST00000288599 PPFIBP2Q8ND30 876 aa5.02□□□□□ -1.61
NCOA1-201ENST00000288599 MICAL1Q8TDZ2 1067 aa5.02□□□□□ -1.61
NCOA1-201ENST00000288599 ANKIB1Q9P2G1 1089 aa5.02□□□□□ -1.61
NCOA1-201ENST00000288599 SEC63Q9UGP8 760 aaKnown RBP5.02□□□□□ -1.61
NCOA1-201ENST00000288599 TRPM1Q7Z4N2 1603 aa5.02□□□□□ -1.61
NCOA1-201ENST00000288599 DYNC1I1O14576 645 aa5.02□□□□□ -1.61
NCOA1-201ENST00000288599 TOM1O60784 492 aa5.02□□□□□ -1.61
NCOA1-201ENST00000288599 PPFIA3O75145 1194 aa5.02□□□□□ -1.61
NCOA1-201ENST00000288599 FLIIQ13045 1269 aa5.02□□□□□ -1.61
NCOA1-201ENST00000288599 MPHOSPH9Q99550 1183 aa5.02□□□□□ -1.61
NCOA1-201ENST00000288599 MTIF3Q9H2K0 278 aaKnown RBP5.02□□□□□ -1.61
NCOA1-201ENST00000288599 SMTNL1A8MU46 457 aa5.02□□□□□ -1.61
NCOA1-201ENST00000288599 GBP6Q6ZN66 633 aa5.02□□□□□ -1.61
NCOA1-201ENST00000288599 TMCO5AQ8N6Q1 288 aa5.02□□□□□ -1.61
NCOA1-201ENST00000288599 ZBTB9Q96C00 473 aa5.02□□□□□ -1.61
NCOA1-201ENST00000288599 PUF60Q9UHX1 559 aaKnown RBP5.02□□□□□ -1.61
NCOA1-201ENST00000288599 ABT1Q9ULW3 272 aaKnown RBP5.02□□□□□ -1.61
NCOA1-201ENST00000288599 ITSN2Q9NZM3 1697 aa5.02□□□□□ -1.61
NCOA1-201ENST00000288599 PREX2Q70Z35 1606 aa5.02□□□□□ -1.61
NCOA1-201ENST00000288599 TSPY2A6NKD2 308 aa5.02□□□□□ -1.61
NCOA1-201ENST00000288599 OCM2P0CE71 109 aa5.02□□□□□ -1.61
NCOA1-201ENST00000288599 OCMP0CE72 109 aaPredicted RBP5.02□□□□□ -1.61
NCOA1-201ENST00000288599 TSPY3P0CV98 308 aa5.02□□□□□ -1.61
NCOA1-201ENST00000288599 TSPY8P0CW00 308 aa5.02□□□□□ -1.61
NCOA1-201ENST00000288599 SPTY2D1Q68D10 685 aaPredicted RBP5.02□□□□□ -1.61
NCOA1-201ENST00000288599 FAM193BQ96PV7 902 aaPredicted RBP5.02□□□□□ -1.61
NCOA1-201ENST00000288599 CCDC113Q9H0I3 377 aa5.02□□□□□ -1.61
NCOA1-201ENST00000288599 INAQ16352 499 aa5.02□□□□□ -1.61
NCOA1-201ENST00000288599 LDHAL6AQ6ZMR3 332 aa5.02□□□□□ -1.61
NCOA1-201ENST00000288599 FASTKD5Q7L8L6 764 aaKnown RBP5.02□□□□□ -1.61
NCOA1-201ENST00000288599 PPP1R14CQ8TAE6 165 aa5.02□□□□□ -1.61
NCOA1-201ENST00000288599 NSMCE1Q8WV22 266 aa5.02□□□□□ -1.61
NCOA1-201ENST00000288599 CTNNBL1Q8WYA6 563 aaPredicted RBP5.02□□□□□ -1.61
NCOA1-201ENST00000288599 CCDC94Q9BW85 323 aaPredicted RBP5.02□□□□□ -1.61
NCOA1-201ENST00000288599 STK32BQ9NY57 414 aa5.02□□□□□ -1.61
NCOA1-201ENST00000288599 GOLGA6AQ9NYA3 693 aa5.02□□□□□ -1.61
NCOA1-201ENST00000288599 GSTTP1A0A1W2PQM5 241 aa5.01□□□□□ -1.61
NCOA1-201ENST00000288599 PER1O15534 1290 aaPredicted RBP5.01□□□□□ -1.61
NCOA1-201ENST00000288599 POLR3DP05423 398 aaPredicted RBP5.01□□□□□ -1.61
NCOA1-201ENST00000288599 ST5P78524 1137 aa5.01□□□□□ -1.61
NCOA1-201ENST00000288599 CEBPZQ03701 1054 aaKnown RBP5.01□□□□□ -1.61
NCOA1-201ENST00000288599 ERMNQ8TAM6 284 aa5.01□□□□□ -1.61
NCOA1-201ENST00000288599 COG3Q96JB2 828 aa5.01□□□□□ -1.61
NCOA1-201ENST00000288599 PALMDQ9NP74 551 aa5.01□□□□□ -1.61
NCOA1-201ENST00000288599 RRP7AQ9Y3A4 280 aaKnown RBP5.01□□□□□ -1.61
NCOA1-201ENST00000288599 MROH1Q8NDA8 1641 aa5.01□□□□□ -1.61
NCOA1-201ENST00000288599 FAM95CA0A1B0GW59 222 aa5.01□□□□□ -1.61
NCOA1-201ENST00000288599 PTCD1O75127 700 aaKnown RBP5.01□□□□□ -1.61
NCOA1-201ENST00000288599 PDCL2Q8N4E4 241 aa5.01□□□□□ -1.61
NCOA1-201ENST00000288599 LIMCH1Q9UPQ0 1083 aa5.01□□□□□ -1.61
NCOA1-201ENST00000288599 KIAA1107Q9UPP5 1409 aa5.01□□□□□ -1.61
NCOA1-201ENST00000288599 STXBP3O00186 592 aa5.01□□□□□ -1.61
NCOA1-201ENST00000288599 TRAK2O60296 914 aa5.01□□□□□ -1.61
NCOA1-201ENST00000288599 PRMT3O60678 531 aa5.01□□□□□ -1.61
NCOA1-201ENST00000288599 ERCC3P19447 782 aa5.01□□□□□ -1.61
NCOA1-201ENST00000288599 CETN1Q12798 172 aa5.01□□□□□ -1.61
NCOA1-201ENST00000288599 PDE3AQ14432 1141 aa5.01□□□□□ -1.61
NCOA1-201ENST00000288599 RNF34Q969K3 372 aa5.01□□□□□ -1.61
NCOA1-201ENST00000288599 HSPA5P11021 654 aaKnown RBP5.01□□□□□ -1.61
NCOA1-201ENST00000288599 APBA1Q02410 837 aa5.01□□□□□ -1.61
NCOA1-201ENST00000288599 C6orf163Q5TEZ5 329 aa5.01□□□□□ -1.61
NCOA1-201ENST00000288599 GABPB2Q8TAK5 448 aaPredicted RBP5.01□□□□□ -1.61
NCOA1-201ENST00000288599 MIPOL1Q8TD10 442 aa5.01□□□□□ -1.61
NCOA1-201ENST00000288599 CCDC102AQ96A19 550 aa5.01□□□□□ -1.61
NCOA1-201ENST00000288599 CGNQ9P2M7 1197 aaKnown RBP5.01□□□□□ -1.61
NCOA1-201ENST00000288599 SAMM50Q9Y512 469 aa5.01□□□□□ -1.61
NCOA1-201ENST00000288599 TMCO5BA8MYB1 307 aa5.01□□□□□ -1.61
NCOA1-201ENST00000288599 VAMP4O75379 141 aa5.01□□□□□ -1.61
NCOA1-201ENST00000288599 CCT6AP40227 531 aaKnown RBP5.01□□□□□ -1.61
NCOA1-201ENST00000288599 UBE4AQ14139 1066 aa5.01□□□□□ -1.61
NCOA1-201ENST00000288599 POLA2Q14181 598 aa5.01□□□□□ -1.61
NCOA1-201ENST00000288599 KRT33BQ14525 404 aa5.01□□□□□ -1.61
NCOA1-201ENST00000288599 TTC39AQ5SRH9 613 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms