RNA–Protein interactions for RNA: ENST00000288599.9

NCOA1-201, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCOA1, Length 6,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-201ENST00000288599 NISCHQ9Y2I1 1504 aa7.76□□□□□ -1.17
NCOA1-201ENST00000288599 FAM9AQ8IZU1 332 aaPredicted RBP7.3□□□□□ -1.24
NCOA1-201ENST00000288599 DCAF8L2P0C7V8 631 aa7.23□□□□□ -1.25
NCOA1-201ENST00000288599 PELP1Q8IZL8 1130 aaKnown RBP7.06□□□□□ -1.28
NCOA1-201ENST00000288599 MYT1Q01538 1121 aa6.89□□□□□ -1.31
NCOA1-201ENST00000288599 ERICH6Q7L0X2 663 aa6.82□□□□□ -1.32
NCOA1-201ENST00000288599 EHMT2Q96KQ7 1210 aa6.8□□□□□ -1.32
NCOA1-201ENST00000288599 MYT1LQ9UL68 1186 aa6.79□□□□□ -1.32
NCOA1-201ENST00000288599 APLP2Q06481 763 aa6.74□□□□□ -1.33
NCOA1-201ENST00000288599 CCER1Q8TC90 406 aaPredicted RBP6.69□□□□□ -1.34
NCOA1-201ENST00000288599 ZCCHC6Q5VYS8 1495 aaKnown RBP6.63□□□□□ -1.35
NCOA1-201ENST00000288599 CCDC180Q9P1Z9 1646 aa6.58□□□□□ -1.36
NCOA1-201ENST00000288599 TTBK1Q5TCY1 1321 aaPredicted RBP6.58□□□□□ -1.36
NCOA1-201ENST00000288599 CHIC1Q5VXU3 224 aa6.57□□□□□ -1.36
NCOA1-201ENST00000288599 ATP1B4Q9UN42 357 aaPredicted RBP6.54□□□□□ -1.36
NCOA1-201ENST00000288599 KRI1Q8N9T8 703 aaKnown RBP6.51□□□□□ -1.37
NCOA1-201ENST00000288599 SUPT5HO00267 1087 aaKnown RBP6.51□□□□□ -1.37
NCOA1-201ENST00000288599 SLC4A1APQ9BWU0 796 aaKnown RBP6.51□□□□□ -1.37
NCOA1-201ENST00000288599 DAXXQ9UER7 740 aaPredicted RBP6.5□□□□□ -1.37
NCOA1-201ENST00000288599 YTHDC1Q96MU7 727 aaKnown RBP6.5□□□□□ -1.37
NCOA1-201ENST00000288599 DCAF1Q9Y4B6 1507 aa6.48□□□□□ -1.37
NCOA1-201ENST00000288599 SLC24A1O60721 1099 aa6.45□□□□□ -1.38
NCOA1-201ENST00000288599 CDK11BP21127 795 aaKnown RBP6.42□□□□□ -1.38
NCOA1-201ENST00000288599 CDK11AQ9UQ88 783 aaPredicted RBP6.42□□□□□ -1.38
NCOA1-201ENST00000288599 BCANQ96GW7 911 aa6.41□□□□□ -1.38
NCOA1-201ENST00000288599 CENPBP07199 599 aaPredicted RBP6.41□□□□□ -1.38
NCOA1-201ENST00000288599 PCGF6Q9BYE7 350 aa6.41□□□□□ -1.38
NCOA1-201ENST00000288599 ZBTB47Q9UFB7 747 aaPredicted RBP6.38□□□□□ -1.39
NCOA1-201ENST00000288599 MYO15BQ96JP2 1530 aa6.38□□□□□ -1.39
NCOA1-201ENST00000288599 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.37□□□□□ -1.39
NCOA1-201ENST00000288599 HNRNPUL2Q1KMD3 747 aaKnown RBP6.37□□□□□ -1.39
NCOA1-201ENST00000288599 NEFLP07196 543 aa6.36□□□□□ -1.39
NCOA1-201ENST00000288599 NEFMP07197 916 aa6.36□□□□□ -1.39
NCOA1-201ENST00000288599 RANGAP1P46060 587 aaPredicted RBP6.35□□□□□ -1.39
NCOA1-201ENST00000288599 DCAF8L1A6NGE4 600 aa6.34□□□□□ -1.39
NCOA1-201ENST00000288599 A0A0G2JS52 829 aa6.32□□□□□ -1.4
NCOA1-201ENST00000288599 ESF1Q9H501 851 aaKnown RBP6.32□□□□□ -1.4
NCOA1-201ENST00000288599 NCBP3Q53F19 620 aaKnown RBP6.31□□□□□ -1.4
NCOA1-201ENST00000288599 CNGB1Q14028 1251 aaPredicted RBP6.3□□□□□ -1.4
NCOA1-201ENST00000288599 SHROOM4Q9ULL8 1493 aa6.28□□□□□ -1.4
NCOA1-201ENST00000288599 POLR3GLQ9BT43 218 aa6.28□□□□□ -1.4
NCOA1-201ENST00000288599 NPM2Q86SE8 214 aaKnown RBP6.27□□□□□ -1.41
NCOA1-201ENST00000288599 CLSPNQ9HAW4 1339 aa6.26□□□□□ -1.41
NCOA1-201ENST00000288599 TRIM26Q12899 539 aaPredicted RBP6.26□□□□□ -1.41
NCOA1-201ENST00000288599 PLPPR3Q6T4P5 718 aa6.24□□□□□ -1.41
NCOA1-201ENST00000288599 FKBP8Q14318 412 aa6.24□□□□□ -1.41
NCOA1-201ENST00000288599 ABCC9O60706 1549 aa6.23□□□□□ -1.41
NCOA1-201ENST00000288599 SCAF1Q9H7N4 1312 aaKnown RBP6.23□□□□□ -1.41
NCOA1-201ENST00000288599 PRM3Q9NNZ6 103 aa6.22□□□□□ -1.41
NCOA1-201ENST00000288599 ZNF316A6NFI3 1004 aaPredicted RBP6.22□□□□□ -1.41
NCOA1-201ENST00000288599 RTL5Q5HYW3 569 aaPredicted RBP6.2□□□□□ -1.42
NCOA1-201ENST00000288599 AEBP2Q6ZN18 517 aaPredicted RBP6.19□□□□□ -1.42
NCOA1-201ENST00000288599 TULP1O00294 542 aaPredicted RBP6.17□□□□□ -1.42
NCOA1-201ENST00000288599 EIF4G1Q04637 1599 aaKnown RBP6.17□□□□□ -1.42
NCOA1-201ENST00000288599 EIF5BO60841 1220 aaKnown RBP6.17□□□□□ -1.42
NCOA1-201ENST00000288599 BCL11AQ9H165 835 aa6.17□□□□□ -1.42
NCOA1-201ENST00000288599 HAP1P54257 671 aaPredicted RBP6.15□□□□□ -1.42
NCOA1-201ENST00000288599 RSF1Q96T23 1441 aaPredicted RBP6.15□□□□□ -1.42
NCOA1-201ENST00000288599 NPHP1O15259 732 aa6.15□□□□□ -1.43
NCOA1-201ENST00000288599 PPARGC1BQ86YN6 1023 aaKnown RBP6.14□□□□□ -1.43
NCOA1-201ENST00000288599 FOXD1Q16676 465 aa6.11□□□□□ -1.43
NCOA1-201ENST00000288599 STAG3Q9UJ98 1225 aa6.11□□□□□ -1.43
NCOA1-201ENST00000288599 MAP3K9P80192 1104 aa6.1□□□□□ -1.43
NCOA1-201ENST00000288599 GOLGA2Q08379 1002 aa6.08□□□□□ -1.44
NCOA1-201ENST00000288599 RB1CC1Q8TDY2 1594 aa6.08□□□□□ -1.44
NCOA1-201ENST00000288599 CLSTN1O94985 981 aa6.07□□□□□ -1.44
NCOA1-201ENST00000288599 CECR2Q9BXF3 1484 aa6.06□□□□□ -1.44
NCOA1-201ENST00000288599 C14orf37Q86TY3 774 aa6.05□□□□□ -1.44
NCOA1-201ENST00000288599 MROH2BQ7Z745 1585 aa6.04□□□□□ -1.44
NCOA1-201ENST00000288599 ZEB1P37275 1124 aaPredicted RBP6.04□□□□□ -1.44
NCOA1-201ENST00000288599 NPM1P06748 294 aaKnown RBP eCLIP6.02□□□□□ -1.44
NCOA1-201ENST00000288599 CNKSR2Q8WXI2 1034 aa6.02□□□□□ -1.45
NCOA1-201ENST00000288599 TMX4Q9H1E5 349 aaPredicted RBP6.02□□□□□ -1.45
NCOA1-201ENST00000288599 CANXP27824 592 aaKnown RBP6.02□□□□□ -1.45
NCOA1-201ENST00000288599 ITGAEP38570 1179 aa6.01□□□□□ -1.45
NCOA1-201ENST00000288599 HRCP23327 699 aa6.01□□□□□ -1.45
NCOA1-201ENST00000288599 PHF23Q9BUL5 403 aaPredicted RBP6.01□□□□□ -1.45
NCOA1-201ENST00000288599 SCRIBQ14160 1630 aa6.01□□□□□ -1.45
NCOA1-201ENST00000288599 NACADO15069 1562 aa6□□□□□ -1.45
NCOA1-201ENST00000288599 NEUROD2Q15784 382 aa6□□□□□ -1.45
NCOA1-201ENST00000288599 ARXQ96QS3 562 aa6□□□□□ -1.45
NCOA1-201ENST00000288599 ZBTB7CA1YPR0 619 aa5.98□□□□□ -1.45
NCOA1-201ENST00000288599 AMER1Q5JTC6 1135 aaPredicted RBP5.97□□□□□ -1.45
NCOA1-201ENST00000288599 UBTFP17480 764 aaKnown RBP5.97□□□□□ -1.45
NCOA1-201ENST00000288599 WIZO95785 1651 aa5.96□□□□□ -1.46
NCOA1-201ENST00000288599 BAZ1AQ9NRL2 1556 aaPredicted RBP5.96□□□□□ -1.46
NCOA1-201ENST00000288599 PPP4R2Q9NY27 417 aa5.96□□□□□ -1.46
NCOA1-201ENST00000288599 UNC13AQ9UPW8 1703 aa5.95□□□□□ -1.46
NCOA1-201ENST00000288599 ANP32BQ92688 251 aaKnown RBP5.95□□□□□ -1.46
NCOA1-201ENST00000288599 FBLN2P98095 1184 aa5.95□□□□□ -1.46
NCOA1-201ENST00000288599 LOC105371045A0A1W2PR82 267 aa5.94□□□□□ -1.46
NCOA1-201ENST00000288599 SENP3Q9H4L4 574 aaPredicted RBP5.94□□□□□ -1.46
NCOA1-201ENST00000288599 BICRAQ9NZM4 1560 aa5.94□□□□□ -1.46
NCOA1-201ENST00000288599 PLEKHG5O94827 1062 aa5.94□□□□□ -1.46
NCOA1-201ENST00000288599 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.94□□□□□ -1.465e-6■□□□□ 10.5
NCOA1-201ENST00000288599 GLIPR1L2Q4G1C9 344 aa5.93□□□□□ -1.46
NCOA1-201ENST00000288599 ANP32EQ9BTT0 268 aa5.93□□□□□ -1.46
NCOA1-201ENST00000288599 DCAF8Q5TAQ9 597 aa5.92□□□□□ -1.46
NCOA1-201ENST00000288599 PEG3Q9GZU2 1588 aa5.92□□□□□ -1.46
NCOA1-201ENST00000288599 ISY1Q9ULR0 285 aaKnown RBP5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms