RNA–Protein interactions for RNA: ENSMUST00000208589.1

Smarca2-238, Transcript of Probable global transcription activator SNF2L2, mousemouse

TSL 5 BASIC

Gene Smarca2, Length 1,054 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca2-238ENSMUST00000208589 U2surpQ6NV83 1029 aaKnown RBP9.53□□□□□ -0.88
Smarca2-238ENSMUST00000208589 Gnl3lQ6PGG6 577 aaKnown RBP9.53□□□□□ -0.88
Smarca2-238ENSMUST00000208589 RydenQ8CAK3 290 aaKnown RBP9.53□□□□□ -0.88
Smarca2-238ENSMUST00000208589 Taf7Q9R1C0 341 aa9.53□□□□□ -0.88
Smarca2-238ENSMUST00000208589 Arfgef2A2A5R2 1792 aa9.52□□□□□ -0.88
Smarca2-238ENSMUST00000208589 Magea1O89006 320 aa9.52□□□□□ -0.89
Smarca2-238ENSMUST00000208589 Magea5O89009 320 aa9.52□□□□□ -0.89
Smarca2-238ENSMUST00000208589 En2P09066 324 aa9.52□□□□□ -0.89
Smarca2-238ENSMUST00000208589 Trpm3Q5F4S9 1721 aa9.52□□□□□ -0.89
Smarca2-238ENSMUST00000208589 Morc2aQ69ZX6 1030 aa9.52□□□□□ -0.89
Smarca2-238ENSMUST00000208589 Rbm26Q6NZN0 1012 aaKnown RBP9.52□□□□□ -0.89
Smarca2-238ENSMUST00000208589 Rapgef4Q9EQZ6 1011 aa9.52□□□□□ -0.89
Smarca2-238ENSMUST00000208589 Magea2Q9R2A2 320 aa9.52□□□□□ -0.89
Smarca2-238ENSMUST00000208589 Spata31d1bE9QA57 1361 aa9.51□□□□□ -0.89
Smarca2-238ENSMUST00000208589 1700019A02RikA0A087WPV9 146 aa9.51□□□□□ -0.89
Smarca2-238ENSMUST00000208589 Pax4P32115 349 aa9.51□□□□□ -0.89
Smarca2-238ENSMUST00000208589 Kcnn2P58390 839 aa9.51□□□□□ -0.89
Smarca2-238ENSMUST00000208589 Wdhd1P59328 1117 aa9.51□□□□□ -0.89
Smarca2-238ENSMUST00000208589 Iqsec3Q3TES0 1195 aa9.51□□□□□ -0.89
Smarca2-238ENSMUST00000208589 Gm12185Q5NCB2 835 aa9.51□□□□□ -0.89
Smarca2-238ENSMUST00000208589 HmcesQ8R1M0 353 aaKnown RBP9.51□□□□□ -0.89
Smarca2-238ENSMUST00000208589 Nip7Q9CXK8 180 aaKnown RBP9.51□□□□□ -0.89
Smarca2-238ENSMUST00000208589 PappaQ8R4K8 1624 aa9.51□□□□□ -0.89
Smarca2-238ENSMUST00000208589 Slc4a9E9PUP3 929 aa9.5□□□□□ -0.89
Smarca2-238ENSMUST00000208589 Eif4a1P60843 406 aaKnown RBP9.5□□□□□ -0.89
Smarca2-238ENSMUST00000208589 ErfeQ6PGN1 340 aa9.5□□□□□ -0.89
Smarca2-238ENSMUST00000208589 Caskin2Q8VHK1 1201 aa9.5□□□□□ -0.89
Smarca2-238ENSMUST00000208589 GckrQ91X44 587 aa9.5□□□□□ -0.89
Smarca2-238ENSMUST00000208589 Usp16Q99LG0 825 aa9.5□□□□□ -0.89
Smarca2-238ENSMUST00000208589 Chmp5Q9D7S9 219 aa9.5□□□□□ -0.89
Smarca2-238ENSMUST00000208589 Col1a2Q01149 1372 aa9.5□□□□□ -0.89
Smarca2-238ENSMUST00000208589 Neurod2Q62414 383 aa9.49□□□□□ -0.89
Smarca2-238ENSMUST00000208589 Znf423Q80TS5 1292 aa9.49□□□□□ -0.89
Smarca2-238ENSMUST00000208589 Ppm1fQ8CGA0 452 aa9.49□□□□□ -0.89
Smarca2-238ENSMUST00000208589 Ccdc9Q8VC31 543 aaKnown RBP9.49□□□□□ -0.89
Smarca2-238ENSMUST00000208589 Mtfr1lQ9CWE0 289 aa9.49□□□□□ -0.89
Smarca2-238ENSMUST00000208589 Kcnq2Q9Z351 759 aa9.49□□□□□ -0.89
Smarca2-238ENSMUST00000208589 MetP16056 1379 aa9.49□□□□□ -0.89
Smarca2-238ENSMUST00000208589 Pibf1E9Q6K3 756 aa9.48□□□□□ -0.89
Smarca2-238ENSMUST00000208589 Tnnt1O88346 262 aa9.48□□□□□ -0.89
Smarca2-238ENSMUST00000208589 Nkx1-2P42580 305 aa9.48□□□□□ -0.89
Smarca2-238ENSMUST00000208589 Nkx2-3P97334 362 aa9.48□□□□□ -0.89
Smarca2-238ENSMUST00000208589 Ccar1Q8CH18 1146 aaKnown RBP9.48□□□□□ -0.89
Smarca2-238ENSMUST00000208589 Amhr2Q8K592 568 aa9.48□□□□□ -0.89
Smarca2-238ENSMUST00000208589 Tmem119Q8R138 280 aa9.48□□□□□ -0.89
Smarca2-238ENSMUST00000208589 Nsfl1cQ9CZ44 370 aaKnown RBP9.48□□□□□ -0.89
Smarca2-238ENSMUST00000208589 Cdc37l1Q9CZP7 335 aa9.48□□□□□ -0.89
Smarca2-238ENSMUST00000208589 PigbQ9JJQ0 542 aa9.48□□□□□ -0.89
Smarca2-238ENSMUST00000208589 Gm36176A0A1W2P8D5 158 aa9.47□□□□□ -0.89
Smarca2-238ENSMUST00000208589 Rbm25B2RY56 838 aaKnown RBP9.47□□□□□ -0.89
Smarca2-238ENSMUST00000208589 Suz12Q80U70 741 aaKnown RBP9.47□□□□□ -0.89
Smarca2-238ENSMUST00000208589 Gigyf1Q99MR1 1044 aaKnown RBP9.47□□□□□ -0.89
Smarca2-238ENSMUST00000208589 Chpf2Q3UU43 768 aa9.46□□□□□ -0.9
Smarca2-238ENSMUST00000208589 Large2Q5XPT3 690 aa9.46□□□□□ -0.9
Smarca2-238ENSMUST00000208589 Ppm1gQ61074 542 aa9.46□□□□□ -0.9
Smarca2-238ENSMUST00000208589 Msl1Q6PDM1 616 aa9.46□□□□□ -0.9
Smarca2-238ENSMUST00000208589 Sumf1Q8R0F3 372 aa9.46□□□□□ -0.9
Smarca2-238ENSMUST00000208589 Nlrp3Q8R4B8 1033 aa9.46□□□□□ -0.9
Smarca2-238ENSMUST00000208589 Ttc21aQ8C0S4 1314 aa9.46□□□□□ -0.9
Smarca2-238ENSMUST00000208589 AtrnQ9WU60 1428 aa9.46□□□□□ -0.9
Smarca2-238ENSMUST00000208589 Prdm11A2AGX3 565 aa9.45□□□□□ -0.9
Smarca2-238ENSMUST00000208589 Ankrd34aB2RW11 495 aa9.45□□□□□ -0.9
Smarca2-238ENSMUST00000208589 Cfap70D3YVL2 1141 aa9.45□□□□□ -0.9
Smarca2-238ENSMUST00000208589 Bcl2l13P59017 434 aa9.45□□□□□ -0.9
Smarca2-238ENSMUST00000208589 Atp1b3P97370 278 aa9.45□□□□□ -0.9
Smarca2-238ENSMUST00000208589 Ksr2Q3UVC0 959 aa9.45□□□□□ -0.9
Smarca2-238ENSMUST00000208589 Ankle2Q6P1H6 964 aa9.45□□□□□ -0.9
Smarca2-238ENSMUST00000208589 Slf2Q6P9P0 1278 aa9.45□□□□□ -0.9
Smarca2-238ENSMUST00000208589 Prkab2Q6PAM0 271 aa9.45□□□□□ -0.9
Smarca2-238ENSMUST00000208589 Zbtb1Q91VL9 713 aa9.45□□□□□ -0.9
Smarca2-238ENSMUST00000208589 Atl3Q91YH5 541 aa9.45□□□□□ -0.9
Smarca2-238ENSMUST00000208589 Syde2E9PUP1 1314 aa9.45□□□□□ -0.9
Smarca2-238ENSMUST00000208589 Prr5lA2AVJ5 370 aa9.44□□□□□ -0.9
Smarca2-238ENSMUST00000208589 FurinP23188 793 aa9.44□□□□□ -0.9
Smarca2-238ENSMUST00000208589 Rnf40Q3U319 1001 aa9.44□□□□□ -0.9
Smarca2-238ENSMUST00000208589 Gas2l2Q5SSG4 860 aa9.44□□□□□ -0.9
Smarca2-238ENSMUST00000208589 Eif4g2Q62448 906 aaKnown RBP9.44□□□□□ -0.9
Smarca2-238ENSMUST00000208589 Esco1Q69Z69 843 aa9.44□□□□□ -0.9
Smarca2-238ENSMUST00000208589 Tspyl2Q7TQI8 677 aa9.44□□□□□ -0.9
Smarca2-238ENSMUST00000208589 SympkQ80X82 1284 aa9.44□□□□□ -0.9
Smarca2-238ENSMUST00000208589 Col23a1Q8K4G2 532 aa9.44□□□□□ -0.9
Smarca2-238ENSMUST00000208589 Klhdc4Q921I2 584 aa9.44□□□□□ -0.9
Smarca2-238ENSMUST00000208589 Slc24a3Q99PD7 645 aa9.44□□□□□ -0.9
Smarca2-238ENSMUST00000208589 NgdnQ9DB96 315 aaKnown RBP9.44□□□□□ -0.9
Smarca2-238ENSMUST00000208589 Dpf1Q9QX66 387 aa9.44□□□□□ -0.9
Smarca2-238ENSMUST00000208589 Ccdc171E9Q1U1 1324 aa9.44□□□□□ -0.9
Smarca2-238ENSMUST00000208589 Ankrd50F7BE84 1390 aa9.44□□□□□ -0.9
Smarca2-238ENSMUST00000208589 VirmaA2AIV2 1811 aaKnown RBP9.43□□□□□ -0.9
Smarca2-238ENSMUST00000208589 Tjp1P39447 1745 aaKnown RBP9.43□□□□□ -0.9
Smarca2-238ENSMUST00000208589 Duxf3A0A0N4SV92 674 aa9.43□□□□□ -0.9
Smarca2-238ENSMUST00000208589 Map3k9Q3U1V8 1077 aa9.43□□□□□ -0.9
Smarca2-238ENSMUST00000208589 Map3k7Q62073 579 aa9.43□□□□□ -0.9
Smarca2-238ENSMUST00000208589 Trim52Q8CDV4 233 aa9.43□□□□□ -0.9
Smarca2-238ENSMUST00000208589 Pank1Q8K4K6 548 aa9.43□□□□□ -0.9
Smarca2-238ENSMUST00000208589 Znrd1-asQ8R0E5 213 aa9.43□□□□□ -0.9
Smarca2-238ENSMUST00000208589 Trim34aQ99PP6 485 aa9.43□□□□□ -0.9
Smarca2-238ENSMUST00000208589 Atxn3Q9CVD2 355 aa9.43□□□□□ -0.9
Smarca2-238ENSMUST00000208589 Clec2iQ9WVF9 217 aa9.43□□□□□ -0.9
Smarca2-238ENSMUST00000208589 ScaperF8VQ70 1398 aaKnown RBP9.42□□□□□ -0.9
Smarca2-238ENSMUST00000208589 Gm6268A2A3U9 297 aa9.42□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 32.6 ms