RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 Triml1Q8BVP1 470 aa15.95■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Sun3Q5SS91 320 aa15.94■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Zmym4A2A791 1549 aaKnown RBP15.94■□□□□ 0.14
Col3a1-201ENSMUST00000087883 NpcdF8VQB8 469 aa15.94■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Gm28919A0A087WP35 240 aa15.94■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Rbm8a2A0A0N4SUH6 174 aa15.94■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Top1Q04750 767 aaKnown RBP15.94■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Trim27Q62158 513 aa15.94■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Ift122Q6NWV3 1182 aa15.94■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Tex2Q6ZPJ0 1128 aaKnown RBP15.94■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Rbm8aQ9CWZ3 174 aa15.94■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Sall3Q62255 1320 aa15.94■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Zfp853A0A1D5RM95 733 aa15.94■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Myd88P22366 296 aa15.94■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Rnf216P58283 853 aa15.94■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Ccdc6D3YZP9 469 aa15.94■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Pdia3P27773 505 aaKnown RBP15.94■□□□□ 0.14
Col3a1-201ENSMUST00000087883 SlmapQ3URD3 845 aa15.94■□□□□ 0.14
Col3a1-201ENSMUST00000087883 CenppQ9CZ92 286 aa15.93■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Setdb1O88974 1307 aa15.93■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Krt15Q61414 452 aa15.93■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Slc5a1Q8C3K6 665 aa15.93■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Tmco5aQ9D9D5 303 aa15.93■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Uso1Q9Z1Z0 959 aaKnown RBP15.93■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Gm3409A0A0G2JE67 319 aa15.93■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Gm45140A0A0N4SUM8 220 aa15.93■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Tbc1d8bA3KGB4 1114 aa15.93■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Ranbp1P34022 203 aaKnown RBP15.93■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Psmd1Q3TXS7 953 aa15.93■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Ehbp1Q69ZW3 1231 aa15.93■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Gigyf2Q6Y7W8 1291 aaKnown RBP15.93■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Fermt2Q8CIB5 680 aa15.93■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Amotl1Q9D4H4 968 aa15.93■□□□□ 0.14
Col3a1-201ENSMUST00000087883 2310002L09RikQ9D7L5 217 aa15.93■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Akap8Q9DBR0 687 aaKnown RBP15.93■□□□□ 0.14
Col3a1-201ENSMUST00000087883 DesP31001 469 aaKnown RBP15.93■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Capza3P70190 299 aa15.93■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Mctp2Q5RJH2 878 aa15.93■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Grpel1Q99LP6 217 aa15.93■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Gbp2Q9Z0E6 589 aa15.93■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Nphp3Q7TNH6 1325 aa15.93■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Stx8O88983 236 aa15.92■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Zfp397Q7TNK4 527 aa15.92■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Rasal2E9PW37 1286 aa15.92■□□□□ 0.14
Col3a1-201ENSMUST00000087883 LifrP42703 1092 aa15.92■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Q3UJC8 639 aa15.92■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Sept7O55131 436 aa15.92■□□□□ 0.14
Col3a1-201ENSMUST00000087883 NsmfQ99NF2 532 aa15.92■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Egfl6Q9JJZ5 550 aa15.92■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Rad50P70388 1312 aa15.92■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Ttc21bQ0HA38 1315 aa15.92■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Gm28510A0A087WP28 240 aa15.92■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Zfpm1O35615 995 aa15.92■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Gm44503E9PYU5 387 aa15.92■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Pcf11G3X9Z4 1553 aa15.91■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Gzf1Q4VBD9 706 aa15.91■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Vps41Q5KU39 853 aa15.91■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Zkscan4Q5SZT6 480 aa15.91■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Gas8Q60779 478 aa15.91■□□□□ 0.14
Col3a1-201ENSMUST00000087883 DymQ8CHY3 669 aa15.91■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Lamc3Q9R0B6 1581 aa15.91■□□□□ 0.14
Col3a1-201ENSMUST00000087883 AqrQ8CFQ3 1481 aaKnown RBP15.91■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Pet2A2AHY8 747 aa15.91■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Sec62Q8BU14 398 aaKnown RBP15.91■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Kiaa1524Q8BWY9 907 aa15.91■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Usp11Q99K46 921 aa15.91■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Gadd45bP22339 160 aa15.91■□□□□ 0.14
Col3a1-201ENSMUST00000087883 ZgpatQ8VDM1 511 aa15.91■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Fam186bD3Z420 943 aa15.91■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Gbp8Q2V6D6 525 aa15.91■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Tmem266Q8BZB3 538 aa15.91■□□□□ 0.14
Col3a1-201ENSMUST00000087883 SltmQ8CH25 1031 aaKnown RBP15.91■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Exoc1Q8R3S6 894 aa15.91■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Rbm33Q9CXK9 1231 aaKnown RBP15.91■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Zap70P43404 618 aa15.9■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Opa1P58281 960 aa15.9■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Ccdc122Q8BVN0 290 aa15.9■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Gbp7Q91Z40 638 aa15.9■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Mxra7Q9CZH7 178 aa15.9■□□□□ 0.14
Col3a1-201ENSMUST00000087883 EprsQ8CGC7 1512 aaKnown RBP15.9■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Sycp2lA0A0M3U1B0 842 aa15.9■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Serpinc1P32261 465 aa15.9■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Spa17Q62252 149 aa15.9■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Cplx4Q80WM3 160 aa15.9■□□□□ 0.14
Col3a1-201ENSMUST00000087883 WtapQ9ER69 396 aa15.9■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Stmn4P63042 189 aa15.9■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Cep19Q9CQA8 163 aa15.9■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Brd1E9PZ26 1189 aaKnown RBP15.9■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Luc7l2Q7TNC4 392 aaKnown RBP15.9■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Tmx3Q8BXZ1 456 aa15.9■□□□□ 0.14
Col3a1-201ENSMUST00000087883 GptQ8QZR5 496 aa15.9■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Krt79Q8VED5 531 aa15.9■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Cnot6lQ8VEG6 555 aa15.9■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Vps36Q91XD6 386 aa15.9■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Haus2Q9CQS9 234 aa15.9■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Tex13c2A0A0G2JGA3 530 aa15.89■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Uspl1Q3ULM6 1089 aa15.89■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Bicd1Q8BR07 835 aa15.89■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Klhdc4Q921I2 584 aa15.89■□□□□ 0.14
Col3a1-201ENSMUST00000087883 Rbbp8nlA2ABX0 614 aa15.89■□□□□ 0.13
Retrieved 100 of 22,080 RNA–protein pairs in 18.3 ms