RNA–Protein interactions for RNA: YPR173C

VPS4, Transcript of AAA-ATPase involved in multivesicular body (MVB) protein sorting, yeastyeast

Gene VPS4, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS4YPR173C MAD1P40957 749 aa6.52□□□□□ -1.37
VPS4YPR173C DAK2P43550 591 aa6.52□□□□□ -1.37
VPS4YPR173C SUM1P46676 1062 aa6.52□□□□□ -1.37
VPS4YPR173C TRS85P46944 698 aa6.52□□□□□ -1.37
VPS4YPR173C YJR115WP47152 169 aa6.52□□□□□ -1.37
VPS4YPR173C ENV11P53246 860 aa6.52□□□□□ -1.37
VPS4YPR173C CWC22P53333 577 aaKnown RBP6.52□□□□□ -1.37
VPS4YPR173C TFC6Q06339 672 aa6.52□□□□□ -1.37
VPS4YPR173C SRF1Q12516 437 aa6.52□□□□□ -1.37
VPS4YPR173C CYB2P00175 591 aa6.51□□□□□ -1.37
VPS4YPR173C HIS4P00815 799 aaKnown RBP6.51□□□□□ -1.37
VPS4YPR173C MCM1P11746 286 aa6.51□□□□□ -1.37
VPS4YPR173C PRP16P15938 1071 aaPredicted RBP6.51□□□□□ -1.37
VPS4YPR173C ALG1P16661 449 aa6.51□□□□□ -1.37
VPS4YPR173C TDA3P38758 523 aa6.51□□□□□ -1.37
VPS4YPR173C VFA1P40080 203 aa6.51□□□□□ -1.37
VPS4YPR173C PCI8P40512 444 aa6.51□□□□□ -1.37
VPS4YPR173C ALG2P43636 503 aa6.51□□□□□ -1.37
VPS4YPR173C RPS0BP46654 252 aaKnown RBP6.51□□□□□ -1.37
VPS4YPR173C AIP1P46680 615 aaKnown RBP6.51□□□□□ -1.37
VPS4YPR173C HFM1P51979 1187 aa6.51□□□□□ -1.37
VPS4YPR173C UFD2P54860 961 aa6.51□□□□□ -1.37
VPS4YPR173C UME1Q03010 460 aa6.51□□□□□ -1.37
VPS4YPR173C POB3Q04636 552 aaKnown RBP6.51□□□□□ -1.37
VPS4YPR173C YPQ2Q06328 317 aa6.51□□□□□ -1.37
VPS4YPR173C SPP382Q06411 708 aaPredicted RBP6.51□□□□□ -1.37
VPS4YPR173C PSR2Q07949 397 aa6.51□□□□□ -1.37
VPS4YPR173C YOR296WQ08748 1289 aa6.51□□□□□ -1.37
VPS4YPR173C PLP2Q12017 286 aa6.51□□□□□ -1.37
VPS4YPR173C TIP41Q12199 356 aa6.51□□□□□ -1.37
VPS4YPR173C SEC39Q12745 709 aa6.51□□□□□ -1.37
VPS4YPR173C CHO2P05374 869 aaKnown RBP6.5□□□□□ -1.37
VPS4YPR173C RAD53P22216 821 aa6.5□□□□□ -1.37
VPS4YPR173C CDC10P25342 322 aaKnown RBP6.5□□□□□ -1.37
VPS4YPR173C HXT1P32465 570 aa6.5□□□□□ -1.37
VPS4YPR173C SUV3P32580 737 aa6.5□□□□□ -1.37
VPS4YPR173C SER1P33330 395 aaKnown RBP6.5□□□□□ -1.37
VPS4YPR173C GRX7P38068 203 aa6.5□□□□□ -1.37
VPS4YPR173C VTI1Q04338 217 aa6.5□□□□□ -1.37
VPS4YPR173C YDR338CQ05497 695 aa6.5□□□□□ -1.37
VPS4YPR173C MRD1Q06106 887 aaKnown RBP6.5□□□□□ -1.37
VPS4YPR173C OPY2Q06810 360 aa6.5□□□□□ -1.37
VPS4YPR173C PUS1Q12211 544 aaKnown RBP6.5□□□□□ -1.37
VPS4YPR173C PPR1P07272 904 aaPredicted RBP6.5□□□□□ -1.37
VPS4YPR173C PRE10P21242 288 aaKnown RBP RIP-Chip data6.5□□□□□ -1.37not detected
VPS4YPR173C DAL7P21826 554 aa6.5□□□□□ -1.37
VPS4YPR173C PDC6P26263 563 aaKnown RBP6.5□□□□□ -1.37
VPS4YPR173C PAP1P29468 568 aaKnown RBP6.5□□□□□ -1.37
VPS4YPR173C PSO2P30620 661 aa6.5□□□□□ -1.37
VPS4YPR173C ANP1P32629 500 aa6.5□□□□□ -1.37
VPS4YPR173C ISW1P38144 1129 aa6.5□□□□□ -1.37
VPS4YPR173C SMC2P38989 1170 aaKnown RBP6.5□□□□□ -1.37
VPS4YPR173C YMR124WP39523 943 aaKnown RBP6.5□□□□□ -1.37
VPS4YPR173C LYS14P40971 790 aa6.5□□□□□ -1.37
VPS4YPR173C LSC2P53312 427 aa6.5□□□□□ -1.37
VPS4YPR173C HDA1P53973 706 aa6.5□□□□□ -1.37
VPS4YPR173C SDH5Q08230 162 aa6.5□□□□□ -1.37
VPS4YPR173C DAS2Q12084 232 aa6.5□□□□□ -1.37
VPS4YPR173C FUR4P05316 633 aaKnown RBP6.49□□□□□ -1.37
VPS4YPR173C TOM70P07213 617 aaKnown RBP6.49□□□□□ -1.37
VPS4YPR173C LAS1P36146 502 aaPredicted RBP6.49□□□□□ -1.37
VPS4YPR173C UGA2P38067 497 aa6.49□□□□□ -1.37
VPS4YPR173C OLA1P38219 394 aaKnown RBP6.49□□□□□ -1.37
VPS4YPR173C ALA1P40825 983 aaKnown RBP6.49□□□□□ -1.37
VPS4YPR173C NUP85P46673 744 aa6.49□□□□□ -1.37
VPS4YPR173C SOV1Q04748 898 aa6.49□□□□□ -1.37
VPS4YPR173C YBL113CQ7M4S9 792 aa6.49□□□□□ -1.37
VPS4YPR173C MET6P05694 767 aaKnown RBP6.48□□□□□ -1.37
VPS4YPR173C PMR1P13586 950 aa6.48□□□□□ -1.37
VPS4YPR173C RNR3P21672 869 aaKnown RBP6.48□□□□□ -1.37
VPS4YPR173C MAK31P23059 88 aa6.48□□□□□ -1.37
VPS4YPR173C GCG1P32656 232 aaKnown RBP6.48□□□□□ -1.37
VPS4YPR173C RRN6P32786 894 aa6.48□□□□□ -1.37
VPS4YPR173C MYO3P36006 1272 aa6.48□□□□□ -1.37
VPS4YPR173C BRE2P43132 505 aa6.48□□□□□ -1.37
VPS4YPR173C VTC2P43585 828 aa6.48□□□□□ -1.37
VPS4YPR173C NCS2P53923 493 aaPredicted RBP6.48□□□□□ -1.37
VPS4YPR173C INM2Q05533 292 aa6.48□□□□□ -1.37
VPS4YPR173C YAP7Q08182 245 aa6.48□□□□□ -1.37
VPS4YPR173C APL5Q08951 932 aaKnown RBP6.48□□□□□ -1.37
VPS4YPR173C ENT1Q12518 454 aa6.48□□□□□ -1.37
VPS4YPR173C SMC6Q12749 1114 aa6.48□□□□□ -1.37
VPS4YPR173C YOR111WQ99210 232 aa6.48□□□□□ -1.37
VPS4YPR173C FOB1O13329 566 aa6.47□□□□□ -1.37
VPS4YPR173C PDB1P32473 366 aaKnown RBP6.47□□□□□ -1.37
VPS4YPR173C SEC8P32855 1065 aa6.47□□□□□ -1.37
VPS4YPR173C SQT1P35184 431 aa6.47□□□□□ -1.37
VPS4YPR173C HEL1P36113 551 aa6.47□□□□□ -1.37
VPS4YPR173C SPP381P38282 291 aaPredicted RBP6.47□□□□□ -1.37
VPS4YPR173C ERP5P38819 212 aa6.47□□□□□ -1.37
VPS4YPR173C RTS1P38903 757 aa6.47□□□□□ -1.37
VPS4YPR173C SSN3P39073 555 aa6.47□□□□□ -1.37
VPS4YPR173C BOL3P39724 118 aa6.47□□□□□ -1.37
VPS4YPR173C MRX1P40050 688 aa6.47□□□□□ -1.37
VPS4YPR173C THI6P41835 540 aa6.47□□□□□ -1.37
VPS4YPR173C IES1P43579 692 aa6.47□□□□□ -1.37
VPS4YPR173C VTC4P47075 721 aa6.47□□□□□ -1.37
VPS4YPR173C MSN5P52918 1224 aa6.47□□□□□ -1.37
VPS4YPR173C YGL138CP53122 345 aa6.47□□□□□ -1.37
VPS4YPR173C YMR114CQ04471 368 aaKnown RBP6.47□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms