RNA–Protein interactions for RNA: YPR046W

MCM16, Transcript of Component of the Ctf19 complex and the COMA subcomplex, yeast

Gene MCM16, Length 546 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MCM16	YPR046W	VPS53	P47061	822 aa		4.77	□□□□□ -1.65
MCM16	YPR046W	YJR120W	P47157	116 aa		4.77	□□□□□ -1.65
MCM16	YPR046W	GPG1	P53130	126 aa		4.77	□□□□□ -1.65
MCM16	YPR046W	RCM1	P53972	490 aa		4.77	□□□□□ -1.65
MCM16	YPR046W	DOT1	Q04089	582 aa	Known RBP	4.77	□□□□□ -1.65
MCM16	YPR046W	ECM16	Q04217	1267 aa	Known RBP	4.77	□□□□□ -1.65
MCM16	YPR046W	DFG16	Q99234	619 aa		4.77	□□□□□ -1.65
MCM16	YPR046W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.76	□□□□□ -1.65	not detected
MCM16	YPR046W	MSD1	P15179	658 aa	Known RBP	4.76	□□□□□ -1.65
MCM16	YPR046W	EUG1	P32474	517 aa		4.76	□□□□□ -1.65
MCM16	YPR046W	HSE1	P38753	452 aa		4.76	□□□□□ -1.65
MCM16	YPR046W	PNT1	P38969	423 aa		4.76	□□□□□ -1.65
MCM16	YPR046W	YAR028W	P39548	234 aa		4.76	□□□□□ -1.65
MCM16	YPR046W	ALG2	P43636	503 aa		4.76	□□□□□ -1.65
MCM16	YPR046W	SRP1	Q02821	542 aa	Known RBP	4.76	□□□□□ -1.65
MCM16	YPR046W	LCD1	Q04377	747 aa		4.76	□□□□□ -1.65
MCM16	YPR046W	DUS3	Q06053	668 aa	Known RBP	4.76	□□□□□ -1.65
MCM16	YPR046W	YPL260W	Q08977	551 aa		4.76	□□□□□ -1.65
MCM16	YPR046W	RET1	P22276	1149 aa	Known RBP	4.75	□□□□□ -1.65
MCM16	YPR046W	PPH3	P32345	308 aa		4.75	□□□□□ -1.65
MCM16	YPR046W	SAH1	P39954	449 aa	Known RBP	4.75	□□□□□ -1.65
MCM16	YPR046W	GPP1	P41277	250 aa	Known RBP	4.75	□□□□□ -1.65
MCM16	YPR046W	PRP43	P53131	767 aa	Known RBP	4.75	□□□□□ -1.65
MCM16	YPR046W	COG6	P53959	839 aa		4.75	□□□□□ -1.65
MCM16	YPR046W	SND1	Q04007	877 aa		4.75	□□□□□ -1.65
MCM16	YPR046W	AVO1	Q08236	1176 aa		4.75	□□□□□ -1.65
MCM16	YPR046W	NYV1	Q12255	253 aa		4.75	□□□□□ -1.65
MCM16	YPR046W	CDC9	P04819	755 aa		4.74	□□□□□ -1.65
MCM16	YPR046W	SRD1	P09007	221 aa		4.74	□□□□□ -1.65
MCM16	YPR046W	TRX2	P22803	104 aa	Known RBP	4.74	□□□□□ -1.65
MCM16	YPR046W	NFS1	P25374	497 aa		4.74	□□□□□ -1.65
MCM16	YPR046W	HIR1	P32479	840 aa		4.74	□□□□□ -1.65
MCM16	YPR046W	YRO2	P38079	344 aa		4.74	□□□□□ -1.65
MCM16	YPR046W	MET13	P53128	600 aa		4.74	□□□□□ -1.65
MCM16	YPR046W	COG8	Q04632	607 aa		4.74	□□□□□ -1.65
MCM16	YPR046W	TRE2	Q08693	809 aa		4.74	□□□□□ -1.65
MCM16	YPR046W	RPL11A	P0C0W9	174 aa	Known RBP	4.73	□□□□□ -1.65
MCM16	YPR046W	YER152C	P10356	443 aa		4.73	□□□□□ -1.65
MCM16	YPR046W	PCL2	P25693	308 aa		4.73	□□□□□ -1.65
MCM16	YPR046W	SPC29	P33419	253 aa		4.73	□□□□□ -1.65
MCM16	YPR046W	FUI1	P38196	639 aa		4.73	□□□□□ -1.65
MCM16	YPR046W	QNS1	P38795	714 aa	Known RBP	4.73	□□□□□ -1.65
MCM16	YPR046W	CAF16	P43569	289 aa		4.73	□□□□□ -1.65
MCM16	YPR046W	YGR021W	P53212	290 aa		4.73	□□□□□ -1.65
MCM16	YPR046W	YGR045C	P53229	120 aa		4.73	□□□□□ -1.65
MCM16	YPR046W	ATG16	Q03818	150 aa		4.73	□□□□□ -1.65
MCM16	YPR046W	MTQ2	Q03920	221 aa	Predicted RBP	4.73	□□□□□ -1.65
MCM16	YPR046W	YDL121C	Q07541	149 aa		4.73	□□□□□ -1.65
MCM16	YPR046W	RPL11B	Q3E757	174 aa	Predicted RBP	4.73	□□□□□ -1.65
MCM16	YPR046W	THS1	P04801	734 aa	Known RBP	4.72	□□□□□ -1.65
MCM16	YPR046W	RPS4A	P0CX35	261 aa	Known RBP	4.72	□□□□□ -1.65
MCM16	YPR046W	RPS4B	P0CX36	261 aa	Known RBP	4.72	□□□□□ -1.65
MCM16	YPR046W	SFL1	P20134	766 aa		4.72	□□□□□ -1.65
MCM16	YPR046W	GAS1	P22146	559 aa	Known RBP	4.72	□□□□□ -1.65
MCM16	YPR046W	REC104	P33323	182 aa		4.72	□□□□□ -1.65
MCM16	YPR046W	HSP78	P33416	811 aa		4.72	□□□□□ -1.65
MCM16	YPR046W	MTC2	P34246	357 aa		4.72	□□□□□ -1.65
MCM16	YPR046W	PEA2	P40091	420 aa		4.72	□□□□□ -1.65
MCM16	YPR046W	YRB30	P53107	440 aa	Predicted RBP	4.72	□□□□□ -1.65
MCM16	YPR046W	PEX14	P53112	341 aa		4.72	□□□□□ -1.65
MCM16	YPR046W	DAM1	P53267	343 aa		4.72	□□□□□ -1.65
MCM16	YPR046W	TGL2	P54857	326 aa		4.72	□□□□□ -1.65
MCM16	YPR046W	RAD18	P10862	487 aa		4.71	□□□□□ -1.66
MCM16	YPR046W	SST2	P11972	698 aa	Known RBP	4.71	□□□□□ -1.66
MCM16	YPR046W	DBP2	P24783	546 aa	Known RBP	4.71	□□□□□ -1.66
MCM16	YPR046W	KIP1	P28742	1111 aa		4.71	□□□□□ -1.66
MCM16	YPR046W	STO1	P34160	861 aa	Known RBP	4.71	□□□□□ -1.66
MCM16	YPR046W	DUG1	P43616	481 aa	Known RBP	4.71	□□□□□ -1.66
MCM16	YPR046W	CCM1	P48237	864 aa	Predicted RBP	4.71	□□□□□ -1.66
MCM16	YPR046W	YGR283C	P53336	341 aa	Predicted RBP	4.71	□□□□□ -1.66
MCM16	YPR046W	BUL2	Q03758	920 aa	Known RBP	4.71	□□□□□ -1.66
MCM16	YPR046W	ALG6	Q12001	544 aa	Known RBP	4.71	□□□□□ -1.66
MCM16	YPR046W	YTM1	Q12024	460 aa	Predicted RBP	4.71	□□□□□ -1.66
MCM16	YPR046W	SPO21	Q12411	609 aa		4.71	□□□□□ -1.66
MCM16	YPR046W	ADP1	P25371	1049 aa		4.7	□□□□□ -1.66
MCM16	YPR046W	PLC1	P32383	869 aa		4.7	□□□□□ -1.66
MCM16	YPR046W	CDC12	P32468	407 aa	Known RBP	4.7	□□□□□ -1.66
MCM16	YPR046W	YKL222C	P35995	705 aa		4.7	□□□□□ -1.66
MCM16	YPR046W	TRZ1	P36159	838 aa	Predicted RBP	4.7	□□□□□ -1.66
MCM16	YPR046W	CKB2	P38930	258 aa		4.7	□□□□□ -1.66
MCM16	YPR046W	MXR1	P40029	184 aa		4.7	□□□□□ -1.66
MCM16	YPR046W	TOK1	P40310	691 aa		4.7	□□□□□ -1.66
MCM16	YPR046W	OYE3	P41816	400 aa	Predicted RBP	4.7	□□□□□ -1.66
MCM16	YPR046W	ATP25	Q03153	612 aa		4.7	□□□□□ -1.66
MCM16	YPR046W	TMA64	Q04600	565 aa	Known RBP	4.7	□□□□□ -1.66
MCM16	YPR046W	RSA3	Q05942	220 aa	Known RBP	4.7	□□□□□ -1.66
MCM16	YPR046W	NKP1	Q12493	238 aa		4.7	□□□□□ -1.66
MCM16	YPR046W	PRP19	P32523	503 aa	Known RBP	4.69	□□□□□ -1.66
MCM16	YPR046W	RPN3	P40016	523 aa	Known RBP	4.69	□□□□□ -1.66
MCM16	YPR046W	YJR096W	P47137	282 aa		4.69	□□□□□ -1.66
MCM16	YPR046W	ELA1	P53861	379 aa	Predicted RBP	4.69	□□□□□ -1.66
MCM16	YPR046W	YDR514C	Q04408	483 aa		4.69	□□□□□ -1.66
MCM16	YPR046W	RSC3	Q06639	885 aa		4.69	□□□□□ -1.66
MCM16	YPR046W	GUD1	Q07729	489 aa		4.69	□□□□□ -1.66
MCM16	YPR046W	ACM1	Q08981	209 aa		4.69	□□□□□ -1.66
MCM16	YPR046W	GIN4	Q12263	1142 aa		4.69	□□□□□ -1.66
MCM16	YPR046W	MPD2	Q99316	277 aa		4.69	□□□□□ -1.66
MCM16	YPR046W	YEF3	P16521	1044 aa	Known RBP	4.68	□□□□□ -1.66
MCM16	YPR046W	PRO1	P32264	428 aa		4.68	□□□□□ -1.66
MCM16	YPR046W	AFR1	P33304	620 aa		4.68	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 9.9 ms