RNA–Protein interactions for RNA: YPL127C

HHO1, Transcript of Histone H1, linker histone with roles in meiosis and sporulation, yeast

Gene HHO1, Length 777 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HHO1	YPL127C	SMC3	P47037	1230 aa		11.48	□□□□□ -0.57
HHO1	YPL127C	CCM1	P48237	864 aa	Predicted RBP	11.48	□□□□□ -0.57
HHO1	YPL127C	YGR125W	P53273	1036 aa		11.48	□□□□□ -0.57
HHO1	YPL127C	TOF1	P53840	1238 aa		11.48	□□□□□ -0.57
HHO1	YPL127C	NCS2	P53923	493 aa	Predicted RBP	11.48	□□□□□ -0.57
HHO1	YPL127C	OPY2	Q06810	360 aa		11.48	□□□□□ -0.57
HHO1	YPL127C	MTF2	P10849	440 aa		11.47	□□□□□ -0.57
HHO1	YPL127C	PHO8	P11491	566 aa		11.47	□□□□□ -0.57
HHO1	YPL127C	TKL1	P23254	680 aa	Known RBP	11.47	□□□□□ -0.57
HHO1	YPL127C	MCX1	P38323	520 aa	Predicted RBP	11.47	□□□□□ -0.57
HHO1	YPL127C	VPS29	P38759	282 aa		11.47	□□□□□ -0.57
HHO1	YPL127C	GIR2	Q03768	265 aa	Predicted RBP	11.47	□□□□□ -0.57
HHO1	YPL127C	FAL1	Q12099	399 aa	Known RBP	11.47	□□□□□ -0.57
HHO1	YPL127C	ERP3	Q12403	225 aa		11.47	□□□□□ -0.57
HHO1	YPL127C	YOL098C	Q12496	1037 aa		11.47	□□□□□ -0.57
HHO1	YPL127C	STE11	P23561	717 aa		11.46	□□□□□ -0.57
HHO1	YPL127C	PDC6	P26263	563 aa	Known RBP	11.46	□□□□□ -0.57
HHO1	YPL127C	KTR2	P33550	425 aa		11.46	□□□□□ -0.57
HHO1	YPL127C	SSP1	P38871	571 aa		11.46	□□□□□ -0.57
HHO1	YPL127C	COS5	P47187	383 aa		11.46	□□□□□ -0.57
HHO1	YPL127C	TCB2	P48231	1178 aa		11.46	□□□□□ -0.57
HHO1	YPL127C	ARK1	P53974	638 aa		11.46	□□□□□ -0.57
HHO1	YPL127C	SML1	Q04964	104 aa		11.46	□□□□□ -0.57
HHO1	YPL127C	SFI1	Q12369	946 aa		11.46	□□□□□ -0.57
HHO1	YPL127C	DBP5	P20449	482 aa	Known RBP	11.45	□□□□□ -0.58
HHO1	YPL127C	UBC1	P21734	215 aa	Known RBP	11.45	□□□□□ -0.58
HHO1	YPL127C	EUG1	P32474	517 aa		11.45	□□□□□ -0.58
HHO1	YPL127C	YSC83	P32792	385 aa		11.45	□□□□□ -0.58
HHO1	YPL127C	VPS35	P34110	944 aa		11.45	□□□□□ -0.58
HHO1	YPL127C	ATG19	P35193	415 aa		11.45	□□□□□ -0.58
HHO1	YPL127C	TVP38	P36164	337 aa		11.45	□□□□□ -0.58
HHO1	YPL127C	REG2	P38232	338 aa		11.45	□□□□□ -0.58
HHO1	YPL127C	SEC9	P40357	651 aa		11.45	□□□□□ -0.58
HHO1	YPL127C	NDC80	P40460	691 aa		11.45	□□□□□ -0.58
HHO1	YPL127C	EFM4	P40516	257 aa		11.45	□□□□□ -0.58
HHO1	YPL127C	FIG4	P42837	879 aa		11.45	□□□□□ -0.58
HHO1	YPL127C	UBP15	P50101	1230 aa		11.45	□□□□□ -0.58
HHO1	YPL127C	YGL039W	P53183	348 aa	Known RBP	11.45	□□□□□ -0.58
HHO1	YPL127C	RLP24	Q07915	199 aa	Known RBP	11.45	□□□□□ -0.58
HHO1	YPL127C	SWI6	P09959	803 aa		11.44	□□□□□ -0.58
HHO1	YPL127C	TCD1	P38756	429 aa		11.44	□□□□□ -0.58
HHO1	YPL127C	SDS3	P40505	327 aa		11.44	□□□□□ -0.58
HHO1	YPL127C	CTR1	P49573	406 aa		11.44	□□□□□ -0.58
HHO1	YPL127C	BOP3	P53958	396 aa		11.44	□□□□□ -0.58
HHO1	YPL127C	SVF1	Q05515	481 aa		11.44	□□□□□ -0.58
HHO1	YPL127C	YPR078C	Q06813	372 aa		11.44	□□□□□ -0.58
HHO1	YPL127C	MCM16	Q12262	181 aa		11.44	□□□□□ -0.58
HHO1	YPL127C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	11.43	□□□□□ -0.58	not detected
HHO1	YPL127C	DPB3	P27344	201 aa		11.43	□□□□□ -0.58
HHO1	YPL127C	SRB4	P32569	687 aa		11.43	□□□□□ -0.58
HHO1	YPL127C	SMC1	P32908	1225 aa		11.43	□□□□□ -0.58
HHO1	YPL127C	YEL1	P34225	687 aa		11.43	□□□□□ -0.58
HHO1	YPL127C	BSD2	P38356	321 aa		11.43	□□□□□ -0.58
HHO1	YPL127C	IES1	P43579	692 aa		11.43	□□□□□ -0.58
HHO1	YPL127C	YLR297W	Q05899	129 aa		11.43	□□□□□ -0.58
HHO1	YPL127C	VAC14	Q06708	880 aa		11.43	□□□□□ -0.58
HHO1	YPL127C	SMC5	Q08204	1093 aa		11.43	□□□□□ -0.58
HHO1	YPL127C	DAS2	Q12084	232 aa		11.43	□□□□□ -0.58
HHO1	YPL127C	HVG1	P0CE11	249 aa		11.42	□□□□□ -0.58
HHO1	YPL127C	TUP1	P16649	713 aa		11.42	□□□□□ -0.58
HHO1	YPL127C	NAM7	P30771	971 aa	Known RBP	11.42	□□□□□ -0.58
HHO1	YPL127C	HXT1	P32465	570 aa		11.42	□□□□□ -0.58
HHO1	YPL127C	YEL043W	P32618	956 aa		11.42	□□□□□ -0.58
HHO1	YPL127C	COT1	P32798	439 aa		11.42	□□□□□ -0.58
HHO1	YPL127C	NIP100	P33420	868 aa		11.42	□□□□□ -0.58
HHO1	YPL127C	BUD16	P39988	312 aa		11.42	□□□□□ -0.58
HHO1	YPL127C	LCB2	P40970	561 aa		11.42	□□□□□ -0.58
HHO1	YPL127C	MAL13	P53338	473 aa		11.42	□□□□□ -0.58
HHO1	YPL127C	ROD1	Q02805	837 aa		11.42	□□□□□ -0.58
HHO1	YPL127C	SLD5	Q03406	294 aa		11.42	□□□□□ -0.58
HHO1	YPL127C	RBA50	Q04418	439 aa		11.42	□□□□□ -0.58
HHO1	YPL127C	CHS2	P14180	963 aa		11.41	□□□□□ -0.58
HHO1	YPL127C	RAD57	P25301	460 aa		11.41	□□□□□ -0.58
HHO1	YPL127C	XRS2	P33301	854 aa		11.41	□□□□□ -0.58
HHO1	YPL127C	TFC4	P33339	1025 aa		11.41	□□□□□ -0.58
HHO1	YPL127C	IXR1	P33417	597 aa		11.41	□□□□□ -0.58
HHO1	YPL127C	YEL025C	P39991	1188 aa		11.41	□□□□□ -0.58
HHO1	YPL127C	DMA2	P53924	522 aa		11.41	□□□□□ -0.58
HHO1	YPL127C	DON1	Q05610	365 aa		11.41	□□□□□ -0.58
HHO1	YPL127C	TSR1	Q07381	788 aa	Known RBP	11.41	□□□□□ -0.58
HHO1	YPL127C	TY3A-G	Q12173	290 aa		11.41	□□□□□ -0.58
HHO1	YPL127C	TY3A-I	Q99219	290 aa		11.41	□□□□□ -0.58
HHO1	YPL127C	TOM70	P07213	617 aa	Known RBP	11.4	□□□□□ -0.58
HHO1	YPL127C	CKI1	P20485	582 aa		11.4	□□□□□ -0.58
HHO1	YPL127C	SSA4	P22202	642 aa	Known RBP	11.4	□□□□□ -0.58
HHO1	YPL127C	CDC48	P25694	835 aa	Known RBP	11.4	□□□□□ -0.58
HHO1	YPL127C	RRP1	P35178	278 aa	Predicted RBP	11.4	□□□□□ -0.58
HHO1	YPL127C	DBP7	P36120	742 aa	Known RBP	11.4	□□□□□ -0.58
HHO1	YPL127C	HXT8	P40886	569 aa		11.4	□□□□□ -0.58
HHO1	YPL127C	VPS53	P47061	822 aa		11.4	□□□□□ -0.58
HHO1	YPL127C	MDR1	P53258	950 aa		11.4	□□□□□ -0.58
HHO1	YPL127C	JIP4	Q03361	876 aa		11.4	□□□□□ -0.58
HHO1	YPL127C	CSR1	Q06705	408 aa	Known RBP	11.4	□□□□□ -0.58
HHO1	YPL127C	MLH2	Q07980	695 aa		11.4	□□□□□ -0.58
HHO1	YPL127C	NOP14	Q99207	810 aa	Known RBP	11.4	□□□□□ -0.58
HHO1	YPL127C	RME1	P32338	300 aa	Known RBP	11.39	□□□□□ -0.59
HHO1	YPL127C	REI1	P38344	393 aa	Predicted RBP	11.39	□□□□□ -0.59
HHO1	YPL127C	TAD1	P53065	400 aa		11.39	□□□□□ -0.59
HHO1	YPL127C	TIM8	P57744	87 aa		11.39	□□□□□ -0.59
HHO1	YPL127C	NGL3	Q03210	505 aa		11.39	□□□□□ -0.59

Retrieved 100 of 5,963 RNA–protein pairs in 200.1 ms