RNA–Protein interactions for RNA: YOR089C

VPS21, Transcript of Endosomal Rab family GTPase, yeastyeast

Gene VPS21, Length 633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS21YOR089C ACM1Q08981 209 aa5.39□□□□□ -1.55
VPS21YOR089C PHR1P05066 565 aaKnown RBP RIP-Chip data5.38□□□□□ -1.55not detected
VPS21YOR089C TOP3P13099 656 aa5.38□□□□□ -1.55
VPS21YOR089C MSD1P15179 658 aaKnown RBP5.38□□□□□ -1.55
VPS21YOR089C TPM2P40414 161 aa5.38□□□□□ -1.55
VPS21YOR089C OYE3P41816 400 aaPredicted RBP5.38□□□□□ -1.55
VPS21YOR089C CIT3P43635 486 aa5.38□□□□□ -1.55
VPS21YOR089C HOS3Q02959 697 aaKnown RBP5.38□□□□□ -1.55
VPS21YOR089C UME1Q03010 460 aa5.38□□□□□ -1.55
VPS21YOR089C YOL057WQ08225 711 aa5.38□□□□□ -1.55
VPS21YOR089C VBA3P25594 458 aa5.37□□□□□ -1.55
VPS21YOR089C REC104P33323 182 aa5.37□□□□□ -1.55
VPS21YOR089C SAH1P39954 449 aaKnown RBP5.37□□□□□ -1.55
VPS21YOR089C NIT3P49954 291 aa5.37□□□□□ -1.55
VPS21YOR089C DAM1P53267 343 aa5.37□□□□□ -1.55
VPS21YOR089C EAR1Q03212 550 aa5.37□□□□□ -1.55
VPS21YOR089C COG8Q04632 607 aa5.37□□□□□ -1.55
VPS21YOR089C FAP7Q12055 197 aaPredicted RBP5.37□□□□□ -1.55
VPS21YOR089C DFG16Q99234 619 aa5.37□□□□□ -1.55
VPS21YOR089C XRN1P22147 1528 aaKnown RBP5.37□□□□□ -1.55
VPS21YOR089C CDC12P32468 407 aaKnown RBP5.36□□□□□ -1.55
VPS21YOR089C UBP5P39944 805 aa5.36□□□□□ -1.55
VPS21YOR089C TNA1P53322 534 aa5.36□□□□□ -1.55
VPS21YOR089C FOL1P53848 824 aa5.36□□□□□ -1.55
VPS21YOR089C RCM1P53972 490 aa5.36□□□□□ -1.55
VPS21YOR089C HFD1Q04458 532 aa5.36□□□□□ -1.55
VPS21YOR089C YLL058WQ12198 575 aa5.36□□□□□ -1.55
VPS21YOR089C COQ4O13525 335 aa5.35□□□□□ -1.55
VPS21YOR089C RPS4AP0CX35 261 aaKnown RBP5.35□□□□□ -1.55
VPS21YOR089C RPS4BP0CX36 261 aaKnown RBP5.35□□□□□ -1.55
VPS21YOR089C PRO1P32264 428 aa5.35□□□□□ -1.55
VPS21YOR089C YKR078WP36158 585 aaKnown RBP5.35□□□□□ -1.55
VPS21YOR089C DNA2P38859 1522 aa5.34□□□□□ -1.55
VPS21YOR089C MEF1P25039 761 aa5.34□□□□□ -1.55
VPS21YOR089C HSP78P33416 811 aa5.34□□□□□ -1.55
VPS21YOR089C SPC29P33419 253 aa5.34□□□□□ -1.55
VPS21YOR089C STO1P34160 861 aaKnown RBP5.34□□□□□ -1.55
VPS21YOR089C CCZ1P38273 704 aa5.34□□□□□ -1.55
VPS21YOR089C GPB2P39717 880 aa5.34□□□□□ -1.55
VPS21YOR089C MXR1P40029 184 aa5.34□□□□□ -1.55
VPS21YOR089C ECL1P48235 211 aa5.34□□□□□ -1.55
VPS21YOR089C ALT1P52893 592 aa5.34□□□□□ -1.55
VPS21YOR089C TMA17Q12513 150 aa5.34□□□□□ -1.55
VPS21YOR089C SRD1P09007 221 aa5.33□□□□□ -1.56
VPS21YOR089C SSD1P24276 1250 aaKnown RBP RIP-Chip data5.33□□□□□ -1.56not detected
VPS21YOR089C DBP2P24783 546 aaKnown RBP5.33□□□□□ -1.56
VPS21YOR089C YSC84P32793 468 aa5.33□□□□□ -1.56
VPS21YOR089C SLA2P33338 968 aa5.33□□□□□ -1.56
VPS21YOR089C UGA2P38067 497 aa5.33□□□□□ -1.56
VPS21YOR089C BAP2P38084 609 aa5.33□□□□□ -1.56
VPS21YOR089C MGS1P40151 587 aa5.33□□□□□ -1.56
VPS21YOR089C TOK1P40310 691 aa5.33□□□□□ -1.56
VPS21YOR089C YJL045WP47052 634 aa5.33□□□□□ -1.56
VPS21YOR089C TPP1Q03796 238 aa5.33□□□□□ -1.56
VPS21YOR089C YDR514CQ04408 483 aa5.33□□□□□ -1.56
VPS21YOR089C YLR001CQ07895 862 aa5.33□□□□□ -1.56
VPS21YOR089C TRE2Q08693 809 aa5.33□□□□□ -1.56
VPS21YOR089C TMA7Q3E764 64 aaKnown RBP5.33□□□□□ -1.56
VPS21YOR089C TSA1P34760 196 aaKnown RBP5.32□□□□□ -1.56
VPS21YOR089C TYS1P36421 394 aaKnown RBP5.32□□□□□ -1.56
VPS21YOR089C ENP1P38333 483 aaKnown RBP5.32□□□□□ -1.56
VPS21YOR089C NIT1P40447 199 aa5.32□□□□□ -1.56
VPS21YOR089C VMS1Q04311 632 aaKnown RBP5.32□□□□□ -1.56
VPS21YOR089C CDA2Q06703 312 aa5.32□□□□□ -1.56
VPS21YOR089C REH1Q06709 432 aa5.32□□□□□ -1.56
VPS21YOR089C NBA1Q08229 501 aaKnown RBP5.32□□□□□ -1.56
VPS21YOR089C PUS7Q08647 676 aaKnown RBP5.32□□□□□ -1.56
VPS21YOR089C REV3P14284 1504 aa5.32□□□□□ -1.56
VPS21YOR089C SIN3P22579 1536 aa5.32□□□□□ -1.56
VPS21YOR089C KOG1P38873 1557 aa5.31□□□□□ -1.56
VPS21YOR089C CDC9P04819 755 aa5.31□□□□□ -1.56
VPS21YOR089C CDC48P25694 835 aaKnown RBP5.31□□□□□ -1.56
VPS21YOR089C EMC3P36039 253 aa5.31□□□□□ -1.56
VPS21YOR089C PIK1P39104 1066 aa5.31□□□□□ -1.56
VPS21YOR089C RRT14P40470 206 aa5.31□□□□□ -1.56
VPS21YOR089C SEC26P41810 973 aaKnown RBP5.31□□□□□ -1.56
VPS21YOR089C CAF16P43569 289 aa5.31□□□□□ -1.56
VPS21YOR089C GYP7P48365 746 aa5.31□□□□□ -1.56
VPS21YOR089C YGR283CP53336 341 aaPredicted RBP5.31□□□□□ -1.56
VPS21YOR089C ATP25Q03153 612 aa5.31□□□□□ -1.56
VPS21YOR089C BUL2Q03758 920 aaKnown RBP5.31□□□□□ -1.56
VPS21YOR089C YOR059CQ08448 450 aaKnown RBP5.31□□□□□ -1.56
VPS21YOR089C YVC1Q12324 675 aa5.31□□□□□ -1.56
VPS21YOR089C RAD18P10862 487 aa5.3□□□□□ -1.56
VPS21YOR089C GAS1P22146 559 aaKnown RBP5.3□□□□□ -1.56
VPS21YOR089C DPB3P27344 201 aa5.3□□□□□ -1.56
VPS21YOR089C RPC82P32349 654 aa5.3□□□□□ -1.56
VPS21YOR089C MTC2P34246 357 aa5.3□□□□□ -1.56
VPS21YOR089C PEX7P39108 375 aa5.3□□□□□ -1.56
VPS21YOR089C HRQ1Q05549 1077 aa5.3□□□□□ -1.56
VPS21YOR089C RSC3Q06639 885 aa5.3□□□□□ -1.56
VPS21YOR089C GUD1Q07729 489 aa5.3□□□□□ -1.56
VPS21YOR089C SLX4Q12098 748 aa5.3□□□□□ -1.56
VPS21YOR089C LPX1Q12405 387 aaKnown RBP5.3□□□□□ -1.56
VPS21YOR089C SFL1P20134 766 aa5.29□□□□□ -1.56
VPS21YOR089C SRO9P25567 434 aaKnown RBP5.29□□□□□ -1.56
VPS21YOR089C PCL2P25693 308 aa5.29□□□□□ -1.56
VPS21YOR089C SEC6P32844 805 aa5.29□□□□□ -1.56
VPS21YOR089C RPN10P38886 268 aaKnown RBP5.29□□□□□ -1.56
VPS21YOR089C YER158CP40095 573 aa5.29□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 50.4 ms