RNA–Protein interactions for RNA: YNL288W

CAF40, Transcript of Component of the CCR4-NOT transcriptional complex, yeastyeast

Gene CAF40, Length 1,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF40YNL288W RPL8AP17076 256 aaKnown RBP6.93□□□□□ -1.3
CAF40YNL288W FPS1P23900 669 aa6.93□□□□□ -1.3
CAF40YNL288W SWI4P25302 1093 aaKnown RBP6.93□□□□□ -1.3
CAF40YNL288W PWP2P25635 923 aaKnown RBP6.93□□□□□ -1.3
CAF40YNL288W UTR4P32626 227 aa6.93□□□□□ -1.3
CAF40YNL288W HXT5P38695 592 aa6.93□□□□□ -1.3
CAF40YNL288W RPN10P38886 268 aaKnown RBP6.93□□□□□ -1.3
CAF40YNL288W CCT3P39077 534 aaKnown RBP6.93□□□□□ -1.3
CAF40YNL288W YGR125WP53273 1036 aa6.93□□□□□ -1.3
CAF40YNL288W SPH1Q06160 661 aa6.93□□□□□ -1.3
CAF40YNL288W SUE1Q06524 206 aa6.93□□□□□ -1.3
CAF40YNL288W PUN1Q06991 263 aa6.93□□□□□ -1.3
CAF40YNL288W GUD1Q07729 489 aa6.93□□□□□ -1.3
CAF40YNL288W ELG1Q12050 791 aa6.93□□□□□ -1.3
CAF40YNL288W CEX1Q12453 761 aa6.93□□□□□ -1.3
CAF40YNL288W TOM1Q03280 3268 aa6.93□□□□□ -1.3
CAF40YNL288W SAM1P10659 382 aaKnown RBP6.92□□□□□ -1.3
CAF40YNL288W HCA4P20448 770 aaKnown RBP6.92□□□□□ -1.3
CAF40YNL288W SAS3P34218 831 aa6.92□□□□□ -1.3
CAF40YNL288W PCI8P40512 444 aa6.92□□□□□ -1.3
CAF40YNL288W FMS1P50264 508 aa6.92□□□□□ -1.3
CAF40YNL288W MTO1P53070 669 aa6.92□□□□□ -1.3
CAF40YNL288W TMA64Q04600 565 aaKnown RBP6.92□□□□□ -1.3
CAF40YNL288W TY1B-AO13527 1196 aaKnown RBP6.91□□□□□ -1.3
CAF40YNL288W RPP1AP05318 106 aaPredicted RBP6.91□□□□□ -1.3
CAF40YNL288W PCT1P13259 424 aa6.91□□□□□ -1.3
CAF40YNL288W RGP1P16664 663 aa6.91□□□□□ -1.3
CAF40YNL288W SUV3P32580 737 aa6.91□□□□□ -1.3
CAF40YNL288W RGT1P32862 1170 aa6.91□□□□□ -1.3
CAF40YNL288W MXR1P40029 184 aa6.91□□□□□ -1.3
CAF40YNL288W YGL138CP53122 345 aa6.91□□□□□ -1.3
CAF40YNL288W LIF1P53150 421 aa6.91□□□□□ -1.3
CAF40YNL288W FAR11P53917 953 aa6.91□□□□□ -1.3
CAF40YNL288W VPS20Q04272 221 aa6.91□□□□□ -1.3
CAF40YNL288W MET7Q08645 548 aa6.91□□□□□ -1.3
CAF40YNL288W ICL2Q12031 575 aa6.91□□□□□ -1.3
CAF40YNL288W YPL150WQ12152 901 aa6.91□□□□□ -1.3
CAF40YNL288W MYO1P08964 1928 aa6.91□□□□□ -1.3
CAF40YNL288W SRO9P25567 434 aaKnown RBP6.9□□□□□ -1.3
CAF40YNL288W MCR1P36060 302 aaKnown RBP6.9□□□□□ -1.3
CAF40YNL288W PAN5P38787 379 aa6.9□□□□□ -1.3
CAF40YNL288W NPA3P47122 385 aa6.9□□□□□ -1.3
CAF40YNL288W ASE1P50275 885 aa6.9□□□□□ -1.3
CAF40YNL288W PEX14P53112 341 aa6.9□□□□□ -1.3
CAF40YNL288W DUS3Q06053 668 aaKnown RBP6.9□□□□□ -1.3
CAF40YNL288W DUS4Q06063 367 aa6.9□□□□□ -1.3
CAF40YNL288W HSP82P02829 709 aaKnown RBP6.89□□□□□ -1.31
CAF40YNL288W CPA2P03965 1118 aaKnown RBP6.89□□□□□ -1.31
CAF40YNL288W SES1P07284 462 aaKnown RBP6.89□□□□□ -1.31
CAF40YNL288W PGI1P12709 554 aaKnown RBP6.89□□□□□ -1.31
CAF40YNL288W STI1P15705 589 aaKnown RBP RIP-Chip data6.89□□□□□ -1.31not detected
CAF40YNL288W PRE10P21242 288 aaKnown RBP RIP-Chip data6.89□□□□□ -1.31not detected
CAF40YNL288W SRP40P32583 406 aaPredicted RBP6.89□□□□□ -1.31
CAF40YNL288W UGA4P32837 571 aa6.89□□□□□ -1.31
CAF40YNL288W SEC8P32855 1065 aa6.89□□□□□ -1.31
CAF40YNL288W PRX1P34227 261 aaKnown RBP6.89□□□□□ -1.31
CAF40YNL288W PSF2P40359 213 aa6.89□□□□□ -1.31
CAF40YNL288W ENT3P47160 408 aa6.89□□□□□ -1.31
CAF40YNL288W RET3P53600 189 aa6.89□□□□□ -1.31
CAF40YNL288W BNI5P53890 448 aaKnown RBP6.89□□□□□ -1.31
CAF40YNL288W GET3Q12154 354 aaKnown RBP6.89□□□□□ -1.31
CAF40YNL288W PHR1P05066 565 aaKnown RBP RIP-Chip data6.88□□□□□ -1.31not detected
CAF40YNL288W BIK1P11709 440 aa6.88□□□□□ -1.31
CAF40YNL288W KAP122P32767 1081 aa6.88□□□□□ -1.31
CAF40YNL288W SHP1P34223 423 aa6.88□□□□□ -1.31
CAF40YNL288W RFC5P38251 354 aa6.88□□□□□ -1.31
CAF40YNL288W SUL1P38359 859 aa6.88□□□□□ -1.31
CAF40YNL288W NDT80P38830 627 aa6.88□□□□□ -1.31
CAF40YNL288W PTA1Q01329 785 aaPredicted RBP6.88□□□□□ -1.31
CAF40YNL288W OYE2Q03558 400 aaKnown RBP6.88□□□□□ -1.31
CAF40YNL288W GIS4Q04233 774 aa6.88□□□□□ -1.31
CAF40YNL288W RGA2Q06407 1009 aa6.88□□□□□ -1.31
CAF40YNL288W ISA1Q07821 250 aaPredicted RBP6.88□□□□□ -1.31
CAF40YNL288W TIP41Q12199 356 aa6.88□□□□□ -1.31
CAF40YNL288W LSP1Q12230 341 aaKnown RBP6.88□□□□□ -1.31
CAF40YNL288W RKM4Q12504 494 aa6.88□□□□□ -1.31
CAF40YNL288W CDC6P09119 513 aa6.87□□□□□ -1.31
CAF40YNL288W THR4P16120 514 aaKnown RBP6.87□□□□□ -1.31
CAF40YNL288W TKL1P23254 680 aaKnown RBP6.87□□□□□ -1.31
CAF40YNL288W TIM23P32897 222 aa6.87□□□□□ -1.31
CAF40YNL288W VPS53P47061 822 aa6.87□□□□□ -1.31
CAF40YNL288W PIL1P53252 339 aaKnown RBP6.87□□□□□ -1.31
CAF40YNL288W BUL2Q03758 920 aaKnown RBP6.87□□□□□ -1.31
CAF40YNL288W CSM3Q04659 317 aa6.87□□□□□ -1.31
CAF40YNL288W SMD2Q06217 110 aaKnown RBP6.87□□□□□ -1.31
CAF40YNL288W ERP3Q12403 225 aa6.87□□□□□ -1.31
CAF40YNL288W NBL1Q3E7Y6 73 aa6.87□□□□□ -1.31
CAF40YNL288W MCM4P30665 933 aaKnown RBP6.86□□□□□ -1.31
CAF40YNL288W TFC4P33339 1025 aa6.86□□□□□ -1.31
CAF40YNL288W YBR197CP38306 217 aa6.86□□□□□ -1.31
CAF40YNL288W DSE4P53753 1117 aa6.86□□□□□ -1.31
CAF40YNL288W MFM1Q02783 413 aa6.86□□□□□ -1.31
CAF40YNL288W SLD5Q03406 294 aa6.86□□□□□ -1.31
CAF40YNL288W MSC6Q08818 692 aaKnown RBP6.86□□□□□ -1.31
CAF40YNL288W DCS2Q12123 353 aa6.86□□□□□ -1.31
CAF40YNL288W ALG1P16661 449 aa6.85□□□□□ -1.31
CAF40YNL288W MRPL33P20084 86 aa6.85□□□□□ -1.31
CAF40YNL288W VPS1P21576 704 aaKnown RBP6.85□□□□□ -1.31
CAF40YNL288W PAH1P32567 862 aa6.85□□□□□ -1.31
CAF40YNL288W MAL33P38157 468 aa6.85□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 102.5 ms