RNA–Protein interactions for RNA: YNL227C

JJJ1, Transcript of Co-chaperone that stimulates the ATPase activity of Ssa1p, yeast

Gene JJJ1, Length 1,773 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
JJJ1	YNL227C	TAT2	P38967	592 aa		4.58	□□□□□ -1.68
JJJ1	YNL227C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
JJJ1	YNL227C	CLU1	Q03690	1277 aa	Known RBP	4.58	□□□□□ -1.68
JJJ1	YNL227C	YPR196W	Q06595	470 aa		4.58	□□□□□ -1.68
JJJ1	YNL227C	TPO1	Q07824	586 aa		4.58	□□□□□ -1.68
JJJ1	YNL227C	SSK2	P53599	1579 aa		4.58	□□□□□ -1.68
JJJ1	YNL227C	SKI3	P17883	1432 aa	Known RBP	4.58	□□□□□ -1.68
JJJ1	YNL227C	SRP101	P32916	621 aa		4.58	□□□□□ -1.68
JJJ1	YNL227C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
JJJ1	YNL227C	YGR012W	P53206	393 aa		4.58	□□□□□ -1.68
JJJ1	YNL227C	TPO2	P53283	614 aa		4.58	□□□□□ -1.68
JJJ1	YNL227C	SFB2	P53953	876 aa		4.58	□□□□□ -1.68
JJJ1	YNL227C	YAP6	Q03935	383 aa		4.58	□□□□□ -1.68
JJJ1	YNL227C	CDC6	P09119	513 aa		4.57	□□□□□ -1.68
JJJ1	YNL227C	YRO2	P38079	344 aa		4.57	□□□□□ -1.68
JJJ1	YNL227C	PRP9	P19736	530 aa	Known RBP	4.56	□□□□□ -1.68
JJJ1	YNL227C	SHM2	P37291	469 aa	Known RBP	4.56	□□□□□ -1.68
JJJ1	YNL227C	NPP2	P39997	493 aa		4.56	□□□□□ -1.68
JJJ1	YNL227C	VPS62	P53285	467 aa		4.56	□□□□□ -1.68
JJJ1	YNL227C	NAN1	Q02931	896 aa	Known RBP	4.56	□□□□□ -1.68
JJJ1	YNL227C	SPO75	Q07798	868 aa		4.56	□□□□□ -1.68
JJJ1	YNL227C	HMI1	Q12039	706 aa		4.56	□□□□□ -1.68
JJJ1	YNL227C	HSF1	P10961	833 aa		4.55	□□□□□ -1.68
JJJ1	YNL227C	YER158C	P40095	573 aa		4.55	□□□□□ -1.68
JJJ1	YNL227C	ALR2	P43553	858 aa		4.55	□□□□□ -1.68
JJJ1	YNL227C	GYP7	P48365	746 aa		4.55	□□□□□ -1.68
JJJ1	YNL227C	PSP2	P50109	593 aa	Known RBP	4.55	□□□□□ -1.68
JJJ1	YNL227C	YLR224W	Q05947	369 aa		4.55	□□□□□ -1.68
JJJ1	YNL227C	TMA10	Q06177	86 aa		4.55	□□□□□ -1.68
JJJ1	YNL227C	ESP1	Q03018	1630 aa		4.55	□□□□□ -1.68
JJJ1	YNL227C	CCC2	P38995	1004 aa		4.55	□□□□□ -1.68
JJJ1	YNL227C	MET12	P46151	657 aa		4.55	□□□□□ -1.68
JJJ1	YNL227C	MCM6	P53091	1017 aa	Known RBP	4.55	□□□□□ -1.68
JJJ1	YNL227C	EAF1	Q06337	982 aa		4.55	□□□□□ -1.68
JJJ1	YNL227C	CDA1	Q06702	301 aa		4.55	□□□□□ -1.68
JJJ1	YNL227C	FMP25	Q08023	583 aa		4.55	□□□□□ -1.68
JJJ1	YNL227C	NOP12	Q08208	459 aa	Known RBP	4.55	□□□□□ -1.68
JJJ1	YNL227C	LST4	P34239	828 aa		4.54	□□□□□ -1.68
JJJ1	YNL227C	PFD1	P46988	109 aa		4.54	□□□□□ -1.68
JJJ1	YNL227C	ADY3	Q07732	790 aa		4.54	□□□□□ -1.68
JJJ1	YNL227C	OSH2	Q12451	1283 aa		4.54	□□□□□ -1.68
JJJ1	YNL227C	CHD1	P32657	1468 aa		4.54	□□□□□ -1.68
JJJ1	YNL227C	MMS22	Q06164	1454 aa		4.54	□□□□□ -1.68
JJJ1	YNL227C	HIS5	P07172	385 aa		4.53	□□□□□ -1.68
JJJ1	YNL227C	RAD4	P14736	754 aa		4.53	□□□□□ -1.68
JJJ1	YNL227C	NPP1	P25353	742 aa		4.53	□□□□□ -1.68
JJJ1	YNL227C	CDC11	P32458	415 aa		4.53	□□□□□ -1.68
JJJ1	YNL227C	YKR078W	P36158	585 aa	Known RBP	4.53	□□□□□ -1.68
JJJ1	YNL227C	TSL1	P38427	1098 aa	Known RBP	4.53	□□□□□ -1.68
JJJ1	YNL227C	PLB1	P39105	664 aa		4.53	□□□□□ -1.68
JJJ1	YNL227C	UBX5	Q06682	500 aa		4.53	□□□□□ -1.68
JJJ1	YNL227C	RPP2A	P05319	106 aa	Known RBP	4.53	□□□□□ -1.69
JJJ1	YNL227C	SPE1	P08432	466 aa		4.53	□□□□□ -1.69
JJJ1	YNL227C	ARE1	P25628	610 aa		4.53	□□□□□ -1.69
JJJ1	YNL227C	CDC48	P25694	835 aa	Known RBP	4.53	□□□□□ -1.69
JJJ1	YNL227C	CTS1	P29029	562 aa		4.53	□□□□□ -1.69
JJJ1	YNL227C	RPL8B	P29453	256 aa	Known RBP	4.53	□□□□□ -1.69
JJJ1	YNL227C	RPC82	P32349	654 aa		4.53	□□□□□ -1.69
JJJ1	YNL227C	YBR284W	P38150	797 aa		4.53	□□□□□ -1.69
JJJ1	YNL227C	MNN10	P50108	393 aa	Known RBP	4.53	□□□□□ -1.69
JJJ1	YNL227C	MYO2	P19524	1574 aa	Known RBP	4.52	□□□□□ -1.69
JJJ1	YNL227C	HBS1	P32769	611 aa	Known RBP	4.52	□□□□□ -1.69
JJJ1	YNL227C	SIT1	P39980	628 aa		4.52	□□□□□ -1.69
JJJ1	YNL227C	TIM54	P47045	478 aa		4.52	□□□□□ -1.69
JJJ1	YNL227C	ERP6	P53198	216 aa		4.52	□□□□□ -1.69
JJJ1	YNL227C	UTP8	P53276	713 aa	Known RBP	4.52	□□□□□ -1.69
JJJ1	YNL227C	YPR071W	Q12346	211 aa		4.52	□□□□□ -1.69
JJJ1	YNL227C	NOT3	P06102	836 aa	Known RBP	4.5	□□□□□ -1.69
JJJ1	YNL227C	STE11	P23561	717 aa		4.5	□□□□□ -1.69
JJJ1	YNL227C	AFR1	P33304	620 aa		4.5	□□□□□ -1.69
JJJ1	YNL227C	ATG19	P35193	415 aa		4.5	□□□□□ -1.69
JJJ1	YNL227C	ERT1	P38140	529 aa		4.5	□□□□□ -1.69
JJJ1	YNL227C	CHA4	P43634	648 aa		4.5	□□□□□ -1.69
JJJ1	YNL227C	RAI1	P53063	387 aa	Known RBP	4.5	□□□□□ -1.69
JJJ1	YNL227C	YGR125W	P53273	1036 aa		4.5	□□□□□ -1.69
JJJ1	YNL227C	LCD1	Q04377	747 aa		4.5	□□□□□ -1.69
JJJ1	YNL227C	HSP60	P19882	572 aa	Known RBP	4.5	□□□□□ -1.69
JJJ1	YNL227C	SCT1	P32784	759 aa		4.5	□□□□□ -1.69
JJJ1	YNL227C	CCM1	P48237	864 aa	Predicted RBP	4.5	□□□□□ -1.69
JJJ1	YNL227C	WHI4	Q07655	649 aa	Known RBP	4.5	□□□□□ -1.69
JJJ1	YNL227C	DNA2	P38859	1522 aa		4.49	□□□□□ -1.69
JJJ1	YNL227C	RFA1	P22336	621 aa	Known RBP	4.49	□□□□□ -1.69
JJJ1	YNL227C	HCM1	P25364	564 aa		4.49	□□□□□ -1.69
JJJ1	YNL227C	REC104	P33323	182 aa		4.49	□□□□□ -1.69
JJJ1	YNL227C	TOK1	P40310	691 aa		4.49	□□□□□ -1.69
JJJ1	YNL227C	VPS30	Q02948	557 aa		4.49	□□□□□ -1.69
JJJ1	YNL227C	STU1	P38198	1513 aa		4.49	□□□□□ -1.69
JJJ1	YNL227C	ATG2	P53855	1592 aa		4.48	□□□□□ -1.69
JJJ1	YNL227C	POL1	P13382	1468 aa		4.48	□□□□□ -1.69
JJJ1	YNL227C	YJL049W	P47048	450 aa		4.48	□□□□□ -1.69
JJJ1	YNL227C	YKE2	P52553	114 aa		4.48	□□□□□ -1.69
JJJ1	YNL227C	HBN1	Q96VH4	193 aa		4.48	□□□□□ -1.69
JJJ1	YNL227C	BUD4	P47136	1447 aa		4.48	□□□□□ -1.69
JJJ1	YNL227C	CIT1	P00890	479 aa		4.48	□□□□□ -1.69
JJJ1	YNL227C	TUB2	P02557	457 aa	Known RBP	4.48	□□□□□ -1.69
JJJ1	YNL227C	HUL4	P40985	892 aa		4.48	□□□□□ -1.69
JJJ1	YNL227C	YBR238C	P38330	731 aa	Known RBP	4.47	□□□□□ -1.69
JJJ1	YNL227C	IOC3	P43596	787 aa		4.47	□□□□□ -1.69
JJJ1	YNL227C	NNF1	P47149	201 aa		4.47	□□□□□ -1.69
JJJ1	YNL227C	PHO23	P50947	330 aa		4.47	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 155.5 ms