RNA–Protein interactions for RNA: YMR298W

LIP1, Transcript of Ceramide synthase subunit, yeastyeast

Gene LIP1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LIP1YMR298W GPB2P39717 880 aa10.41□□□□□ -0.74
LIP1YMR298W VFA1P40080 203 aa10.41□□□□□ -0.74
LIP1YMR298W YIL089WP40500 205 aa10.41□□□□□ -0.74
LIP1YMR298W HFM1P51979 1187 aa10.41□□□□□ -0.74
LIP1YMR298W VID30P53076 958 aa10.41□□□□□ -0.74
LIP1YMR298W HUL5P53119 910 aa10.41□□□□□ -0.74
LIP1YMR298W HOS3Q02959 697 aaKnown RBP10.41□□□□□ -0.74
LIP1YMR298W DUS3Q06053 668 aaKnown RBP10.41□□□□□ -0.74
LIP1YMR298W ISA1Q07821 250 aaPredicted RBP10.41□□□□□ -0.74
LIP1YMR298W RRP6Q12149 733 aaKnown RBP10.41□□□□□ -0.74
LIP1YMR298W MED1Q12321 566 aa10.41□□□□□ -0.74
LIP1YMR298W PCK1P10963 549 aa10.4□□□□□ -0.74
LIP1YMR298W MRF1P30775 413 aaPredicted RBP10.4□□□□□ -0.74
LIP1YMR298W UTR4P32626 227 aa10.4□□□□□ -0.74
LIP1YMR298W RPN3P40016 523 aaKnown RBP10.4□□□□□ -0.74
LIP1YMR298W FIS1P40515 155 aa10.4□□□□□ -0.74
LIP1YMR298W PEX21P50091 288 aa10.4□□□□□ -0.74
LIP1YMR298W NBP1P52919 319 aaPredicted RBP10.4□□□□□ -0.74
LIP1YMR298W ZPR1P53303 486 aaKnown RBP10.4□□□□□ -0.74
LIP1YMR298W YDL057WQ07379 328 aa10.4□□□□□ -0.74
LIP1YMR298W YPL277CQ08989 487 aa10.4□□□□□ -0.74
LIP1YMR298W CDC19P00549 500 aaKnown RBP10.39□□□□□ -0.75
LIP1YMR298W SSB1P11484 613 aaKnown RBP10.39□□□□□ -0.75
LIP1YMR298W TCP1P12612 559 aaKnown RBP10.39□□□□□ -0.75
LIP1YMR298W RRP43P25359 394 aaPredicted RBP10.39□□□□□ -0.75
LIP1YMR298W APL1P27351 700 aa10.39□□□□□ -0.75
LIP1YMR298W SSB2P40150 613 aaKnown RBP10.39□□□□□ -0.75
LIP1YMR298W ULP2P40537 1034 aaPredicted RBP10.39□□□□□ -0.75
LIP1YMR298W ERG5P54781 538 aa10.39□□□□□ -0.75
LIP1YMR298W CUR1Q06469 252 aa10.39□□□□□ -0.75
LIP1YMR298W CRD1Q07560 283 aa10.39□□□□□ -0.75
LIP1YMR298W NEW1Q08972 1196 aaKnown RBP10.39□□□□□ -0.75
LIP1YMR298W CWC2Q12046 339 aaPredicted RBP10.39□□□□□ -0.75
LIP1YMR298W SHP1P34223 423 aa10.38□□□□□ -0.75
LIP1YMR298W PCS60P38137 543 aaKnown RBP RIP-Chip data10.38□□□□□ -0.75not detected
LIP1YMR298W CAJ1P39101 391 aa10.38□□□□□ -0.75
LIP1YMR298W CEP3P40969 608 aa10.38□□□□□ -0.75
LIP1YMR298W APT1P49435 187 aaKnown RBP10.38□□□□□ -0.75
LIP1YMR298W YGR125WP53273 1036 aa10.38□□□□□ -0.75
LIP1YMR298W CFT2Q12102 859 aaPredicted RBP10.38□□□□□ -0.75
LIP1YMR298W NOP58Q12499 511 aaKnown RBP10.38□□□□□ -0.75
LIP1YMR298W SEC23P15303 768 aaKnown RBP10.37□□□□□ -0.75
LIP1YMR298W PET123P17558 318 aa10.37□□□□□ -0.75
LIP1YMR298W DAL7P21826 554 aa10.37□□□□□ -0.75
LIP1YMR298W TRK2P28584 889 aa10.37□□□□□ -0.75
LIP1YMR298W PGM2P37012 569 aaKnown RBP10.37□□□□□ -0.75
LIP1YMR298W UBP13P38187 747 aa10.37□□□□□ -0.75
LIP1YMR298W UBP5P39944 805 aa10.37□□□□□ -0.75
LIP1YMR298W ATG3P40344 310 aa10.37□□□□□ -0.75
LIP1YMR298W SHQ1P40486 507 aaPredicted RBP10.37□□□□□ -0.75
LIP1YMR298W CCM1P48237 864 aaPredicted RBP10.37□□□□□ -0.75
LIP1YMR298W TOF1P53840 1238 aa10.37□□□□□ -0.75
LIP1YMR298W NCS2P53923 493 aaPredicted RBP10.37□□□□□ -0.75
LIP1YMR298W UME1Q03010 460 aa10.37□□□□□ -0.75
LIP1YMR298W VPS60Q03390 229 aa10.37□□□□□ -0.75
LIP1YMR298W UTP5Q04177 643 aaKnown RBP10.37□□□□□ -0.75
LIP1YMR298W YOL098CQ12496 1037 aa10.37□□□□□ -0.75
LIP1YMR298W PET111P08468 800 aa10.36□□□□□ -0.75
LIP1YMR298W MTF2P10849 440 aa10.36□□□□□ -0.75
LIP1YMR298W SPO12P17123 173 aa10.36□□□□□ -0.75
LIP1YMR298W PKC1P24583 1151 aa10.36□□□□□ -0.75
LIP1YMR298W SEC8P32855 1065 aa10.36□□□□□ -0.75
LIP1YMR298W SMC2P38989 1170 aaKnown RBP10.36□□□□□ -0.75
LIP1YMR298W CCC2P38995 1004 aa10.36□□□□□ -0.75
LIP1YMR298W HMF1P40037 129 aaKnown RBP10.36□□□□□ -0.75
LIP1YMR298W SMC3P47037 1230 aa10.36□□□□□ -0.75
LIP1YMR298W CTR1P49573 406 aa10.36□□□□□ -0.75
LIP1YMR298W CAF130P53280 1122 aaPredicted RBP10.36□□□□□ -0.75
LIP1YMR298W GIR2Q03768 265 aaPredicted RBP10.36□□□□□ -0.75
LIP1YMR298W SVF1Q05515 481 aa10.36□□□□□ -0.75
LIP1YMR298W ERP3Q12403 225 aa10.36□□□□□ -0.75
LIP1YMR298W PPR1P07272 904 aaPredicted RBP10.35□□□□□ -0.75
LIP1YMR298W PHO8P11491 566 aa10.35□□□□□ -0.75
LIP1YMR298W TKL1P23254 680 aaKnown RBP10.35□□□□□ -0.75
LIP1YMR298W EUG1P32474 517 aa10.35□□□□□ -0.75
LIP1YMR298W STO1P34160 861 aaKnown RBP10.35□□□□□ -0.75
LIP1YMR298W MID1P41821 548 aa10.35□□□□□ -0.75
LIP1YMR298W COS5P47187 383 aa10.35□□□□□ -0.75
LIP1YMR298W YGL039WP53183 348 aaKnown RBP10.35□□□□□ -0.75
LIP1YMR298W OPY2Q06810 360 aa10.35□□□□□ -0.75
LIP1YMR298W AI4P03878 556 aa10.34□□□□□ -0.75
LIP1YMR298W DBP5P20449 482 aaKnown RBP10.34□□□□□ -0.75
LIP1YMR298W YSC83P32792 385 aa10.34□□□□□ -0.75
LIP1YMR298W KTR2P33550 425 aa10.34□□□□□ -0.75
LIP1YMR298W ATG19P35193 415 aa10.34□□□□□ -0.75
LIP1YMR298W REG2P38232 338 aa10.34□□□□□ -0.75
LIP1YMR298W MCX1P38323 520 aaPredicted RBP10.34□□□□□ -0.75
LIP1YMR298W SEC9P40357 651 aa10.34□□□□□ -0.75
LIP1YMR298W UBP15P50101 1230 aa10.34□□□□□ -0.75
LIP1YMR298W ARK1P53974 638 aa10.34□□□□□ -0.75
LIP1YMR298W SFI1Q12369 946 aa10.34□□□□□ -0.75
LIP1YMR298W SWI6P09959 803 aa10.33□□□□□ -0.76
LIP1YMR298W UBC1P21734 215 aaKnown RBP10.33□□□□□ -0.76
LIP1YMR298W PDC6P26263 563 aaKnown RBP10.33□□□□□ -0.76
LIP1YMR298W YEL1P34225 687 aa10.33□□□□□ -0.76
LIP1YMR298W TVP38P36164 337 aa10.33□□□□□ -0.76
LIP1YMR298W BSD2P38356 321 aa10.33□□□□□ -0.76
LIP1YMR298W FIG4P42837 879 aa10.33□□□□□ -0.76
LIP1YMR298W IES1P43579 692 aa10.33□□□□□ -0.76
LIP1YMR298W YPR078CQ06813 372 aa10.33□□□□□ -0.76
Retrieved 100 of 5,963 RNA–protein pairs in 63.6 ms