RNA–Protein interactions for RNA: YLR451W

LEU3, Transcript of Zinc-knuckle transcription factor, repressor and activator, yeast

Gene LEU3, Length 2,661 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LEU3	YLR451W	MET13	P53128	600 aa		3.28	□□□□□ -1.88
LEU3	YLR451W	SSB1	P11484	613 aa	Known RBP	3.27	□□□□□ -1.89
LEU3	YLR451W	YCL002C	P25565	263 aa		3.27	□□□□□ -1.89
LEU3	YLR451W	SRO9	P25567	434 aa	Known RBP	3.27	□□□□□ -1.89
LEU3	YLR451W	YKR078W	P36158	585 aa	Known RBP	3.27	□□□□□ -1.89
LEU3	YLR451W	SSB2	P40150	613 aa	Known RBP	3.27	□□□□□ -1.89
LEU3	YLR451W	YMR187C	Q03236	431 aa		3.27	□□□□□ -1.89
LEU3	YLR451W	RSC3	Q06639	885 aa		3.27	□□□□□ -1.89
LEU3	YLR451W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	3.27	□□□□□ -1.89	not detected
LEU3	YLR451W	FBP1	P09201	348 aa		3.27	□□□□□ -1.89
LEU3	YLR451W	CDC11	P32458	415 aa		3.27	□□□□□ -1.89
LEU3	YLR451W	EMC3	P36039	253 aa		3.27	□□□□□ -1.89
LEU3	YLR451W	ECM21	P38167	1117 aa	Known RBP	3.27	□□□□□ -1.89
LEU3	YLR451W	SAH1	P39954	449 aa	Known RBP	3.27	□□□□□ -1.89
LEU3	YLR451W	RRT14	P40470	206 aa		3.27	□□□□□ -1.89
LEU3	YLR451W	GPP1	P41277	250 aa	Known RBP	3.27	□□□□□ -1.89
LEU3	YLR451W	CAF16	P43569	289 aa		3.27	□□□□□ -1.89
LEU3	YLR451W	HDA1	P53973	706 aa		3.27	□□□□□ -1.89
LEU3	YLR451W	TGL2	P54857	326 aa		3.27	□□□□□ -1.89
LEU3	YLR451W	YDR338C	Q05497	695 aa		3.27	□□□□□ -1.89
LEU3	YLR451W	PPH3	P32345	308 aa		3.26	□□□□□ -1.89
LEU3	YLR451W	ATG14	P38270	344 aa		3.26	□□□□□ -1.89
LEU3	YLR451W	PCM1	P38628	557 aa	Known RBP	3.26	□□□□□ -1.89
LEU3	YLR451W	SNF7	P39929	240 aa	Known RBP	3.26	□□□□□ -1.89
LEU3	YLR451W	CIT3	P43635	486 aa		3.26	□□□□□ -1.89
LEU3	YLR451W	LRS4	Q04087	347 aa	Known RBP	3.26	□□□□□ -1.89
LEU3	YLR451W	THI73	Q07904	523 aa		3.26	□□□□□ -1.89
LEU3	YLR451W	GPR1	Q12361	961 aa		3.26	□□□□□ -1.89
LEU3	YLR451W	TRP3	P00937	484 aa		3.26	□□□□□ -1.89
LEU3	YLR451W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	3.26	□□□□□ -1.89	not detected
LEU3	YLR451W	FUN30	P31380	1131 aa		3.26	□□□□□ -1.89
LEU3	YLR451W	TOM20	P35180	183 aa		3.26	□□□□□ -1.89
LEU3	YLR451W	YER158C	P40095	573 aa		3.26	□□□□□ -1.89
LEU3	YLR451W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	3.26	□□□□□ -1.89	not detected
LEU3	YLR451W	YPL034W	Q03083	165 aa		3.26	□□□□□ -1.89
LEU3	YLR451W	TRE1	Q08919	783 aa		3.26	□□□□□ -1.89
LEU3	YLR451W	YBR182C-A	Q8TGU6	64 aa		3.26	□□□□□ -1.89
LEU3	YLR451W	ADE8	P04161	214 aa		3.26	□□□□□ -1.89
LEU3	YLR451W	MDL2	P33311	773 aa		3.26	□□□□□ -1.89
LEU3	YLR451W	YGL081W	P53156	320 aa		3.26	□□□□□ -1.89
LEU3	YLR451W	RCM1	P53972	490 aa		3.26	□□□□□ -1.89
LEU3	YLR451W	SRP1	Q02821	542 aa	Known RBP	3.26	□□□□□ -1.89
LEU3	YLR451W	MSC2	Q03455	724 aa		3.26	□□□□□ -1.89
LEU3	YLR451W	SIZ1	Q04195	904 aa		3.26	□□□□□ -1.89
LEU3	YLR451W	MET7	Q08645	548 aa		3.26	□□□□□ -1.89
LEU3	YLR451W	FOL1	P53848	824 aa		3.25	□□□□□ -1.89
LEU3	YLR451W	ORC3	P54790	616 aa		3.25	□□□□□ -1.89
LEU3	YLR451W	CDA1	Q06702	301 aa		3.25	□□□□□ -1.89
LEU3	YLR451W	PHM7	Q12252	991 aa		3.25	□□□□□ -1.89
LEU3	YLR451W	YPR053C	Q6Q5F3	151 aa		3.25	□□□□□ -1.89
LEU3	YLR451W	SFL1	P20134	766 aa		3.25	□□□□□ -1.89
LEU3	YLR451W	CDC48	P25694	835 aa	Known RBP	3.25	□□□□□ -1.89
LEU3	YLR451W	YKR073C	P36153	106 aa		3.25	□□□□□ -1.89
LEU3	YLR451W	CTH1	P47976	325 aa		3.25	□□□□□ -1.89
LEU3	YLR451W	CCM1	P48237	864 aa	Predicted RBP	3.25	□□□□□ -1.89
LEU3	YLR451W	SSY1	Q03770	852 aa		3.25	□□□□□ -1.89
LEU3	YLR451W	SVS1	Q12254	260 aa		3.25	□□□□□ -1.89
LEU3	YLR451W	YDL177C	Q12257	170 aa		3.25	□□□□□ -1.89
LEU3	YLR451W	CDC6	P09119	513 aa		3.24	□□□□□ -1.89
LEU3	YLR451W	PTC7	P38797	343 aa		3.24	□□□□□ -1.89
LEU3	YLR451W	DSS1	P39112	969 aa		3.24	□□□□□ -1.89
LEU3	YLR451W	TAD1	P53065	400 aa		3.24	□□□□□ -1.89
LEU3	YLR451W	MTQ2	Q03920	221 aa	Predicted RBP	3.24	□□□□□ -1.89
LEU3	YLR451W	SSL1	Q04673	461 aa	Predicted RBP	3.24	□□□□□ -1.89
LEU3	YLR451W	ATG33	Q06485	197 aa		3.24	□□□□□ -1.89
LEU3	YLR451W	HMG1	P12683	1054 aa		3.24	□□□□□ -1.89
LEU3	YLR451W	PER1	P25625	357 aa		3.24	□□□□□ -1.89
LEU3	YLR451W	RPD3	P32561	433 aa		3.24	□□□□□ -1.89
LEU3	YLR451W	ICP55	P40051	511 aa		3.24	□□□□□ -1.89
LEU3	YLR451W	CCT8	P47079	568 aa	Known RBP	3.24	□□□□□ -1.89
LEU3	YLR451W	YGR237C	P50089	785 aa		3.24	□□□□□ -1.89
LEU3	YLR451W	AIM14	P53109	570 aa		3.24	□□□□□ -1.89
LEU3	YLR451W	UME1	Q03010	460 aa		3.24	□□□□□ -1.89
LEU3	YLR451W	PLB2	Q03674	706 aa		3.24	□□□□□ -1.89
LEU3	YLR451W	TMA17	Q12513	150 aa		3.24	□□□□□ -1.89
LEU3	YLR451W	COQ4	O13525	335 aa		3.23	□□□□□ -1.89
LEU3	YLR451W	RAD18	P10862	487 aa		3.23	□□□□□ -1.89
LEU3	YLR451W	YJR008W	P47085	338 aa		3.23	□□□□□ -1.89
LEU3	YLR451W	COG6	P53959	839 aa		3.23	□□□□□ -1.89
LEU3	YLR451W	YOR059C	Q08448	450 aa	Known RBP	3.23	□□□□□ -1.89
LEU3	YLR451W	CCR4	P31384	837 aa	Known RBP	3.23	□□□□□ -1.89
LEU3	YLR451W	TAT1	P38085	619 aa		3.23	□□□□□ -1.89
LEU3	YLR451W	YJR096W	P47137	282 aa		3.23	□□□□□ -1.89
LEU3	YLR451W	PEX8	P53248	589 aa		3.23	□□□□□ -1.89
LEU3	YLR451W	YGR130C	P53278	816 aa		3.23	□□□□□ -1.89
LEU3	YLR451W	ARP4	P80428	489 aa		3.23	□□□□□ -1.89
LEU3	YLR451W	SLU7	Q02775	382 aa	Known RBP	3.23	□□□□□ -1.89
LEU3	YLR451W	THI21	Q08975	551 aa		3.23	□□□□□ -1.89
LEU3	YLR451W	EUG1	P32474	517 aa		3.22	□□□□□ -1.89
LEU3	YLR451W	YEL1	P34225	687 aa		3.22	□□□□□ -1.89
LEU3	YLR451W	TYS1	P36421	394 aa	Known RBP	3.22	□□□□□ -1.89
LEU3	YLR451W	CCZ1	P38273	704 aa		3.22	□□□□□ -1.89
LEU3	YLR451W	GTS1	P40956	396 aa		3.22	□□□□□ -1.89
LEU3	YLR451W	HAL9	Q12180	1030 aa		3.22	□□□□□ -1.89
LEU3	YLR451W	CHS2	P14180	963 aa		3.22	□□□□□ -1.89
LEU3	YLR451W	MSB1	P21339	1137 aa	Known RBP	3.22	□□□□□ -1.89
LEU3	YLR451W	GBP2	P25555	427 aa	Known RBP RIP-Chip data	3.22	□□□□□ -1.89	not detected
LEU3	YLR451W	HOG1	P32485	435 aa		3.22	□□□□□ -1.89
LEU3	YLR451W	STE13	P33894	931 aa		3.22	□□□□□ -1.89
LEU3	YLR451W	MPH2	P0CD99	609 aa		3.21	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms