RNA–Protein interactions for RNA: YLR440C

SEC39, Transcript of Component of the Dsl1p tethering complex, yeast

Gene SEC39, Length 2,130 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC39	YLR440C	LHS1	P36016	881 aa		5.38	□□□□□ -1.55
SEC39	YLR440C	YBL086C	P38177	466 aa		5.38	□□□□□ -1.55
SEC39	YLR440C	KIC1	P38692	1080 aa		5.38	□□□□□ -1.55
SEC39	YLR440C	YHR219W	P38900	624 aa		5.38	□□□□□ -1.55
SEC39	YLR440C	YIR014W	P40570	242 aa		5.38	□□□□□ -1.55
SEC39	YLR440C	MIG2	P53035	382 aa		5.38	□□□□□ -1.55
SEC39	YLR440C	SPN1	Q06505	410 aa	Predicted RBP	5.38	□□□□□ -1.55
SEC39	YLR440C	MCP2	Q06567	569 aa		5.38	□□□□□ -1.55
SEC39	YLR440C	MSC6	Q08818	692 aa	Known RBP	5.38	□□□□□ -1.55
SEC39	YLR440C	NYV1	Q12255	253 aa		5.38	□□□□□ -1.55
SEC39	YLR440C	KAR2	P16474	682 aa	Known RBP	5.37	□□□□□ -1.55
SEC39	YLR440C	MSH2	P25847	964 aa		5.37	□□□□□ -1.55
SEC39	YLR440C	XRS2	P33301	854 aa		5.37	□□□□□ -1.55
SEC39	YLR440C	OSH3	P38713	996 aa	Known RBP	5.37	□□□□□ -1.55
SEC39	YLR440C	KAP123	P40069	1113 aa	Known RBP	5.37	□□□□□ -1.55
SEC39	YLR440C	RSM25	P40496	264 aa		5.37	□□□□□ -1.55
SEC39	YLR440C	YJL055W	P47044	245 aa		5.37	□□□□□ -1.55
SEC39	YLR440C	YJL007C	P47080	104 aa		5.37	□□□□□ -1.55
SEC39	YLR440C	LSG1	P53145	640 aa	Known RBP	5.37	□□□□□ -1.55
SEC39	YLR440C	MDR1	P53258	950 aa		5.37	□□□□□ -1.55
SEC39	YLR440C	RAT1	Q02792	1006 aa	Known RBP	5.37	□□□□□ -1.55
SEC39	YLR440C	MAK21	Q12176	1025 aa	Known RBP	5.37	□□□□□ -1.55
SEC39	YLR440C	TMA7	Q3E764	64 aa	Known RBP	5.37	□□□□□ -1.55
SEC39	YLR440C	URB1	P34241	1764 aa	Known RBP	5.37	□□□□□ -1.55
SEC39	YLR440C	JIP3	O13555	125 aa		5.36	□□□□□ -1.55
SEC39	YLR440C	NOT3	P06102	836 aa	Known RBP	5.36	□□□□□ -1.55
SEC39	YLR440C	VPS3	P23643	1011 aa		5.36	□□□□□ -1.55
SEC39	YLR440C	SSO1	P32867	290 aa		5.36	□□□□□ -1.55
SEC39	YLR440C	DED81	P38707	554 aa	Known RBP	5.36	□□□□□ -1.55
SEC39	YLR440C	CRP1	P38845	465 aa	Known RBP	5.36	□□□□□ -1.55
SEC39	YLR440C	SLN1	P39928	1220 aa	Predicted RBP	5.36	□□□□□ -1.55
SEC39	YLR440C	TIF4631	P39935	952 aa	Known RBP	5.36	□□□□□ -1.55
SEC39	YLR440C	AIM10	P39965	576 aa	Known RBP	5.36	□□□□□ -1.55
SEC39	YLR440C	YGR067C	P53243	804 aa		5.36	□□□□□ -1.55
SEC39	YLR440C	FMP30	Q02883	468 aa		5.36	□□□□□ -1.55
SEC39	YLR440C	DON1	Q05610	365 aa		5.36	□□□□□ -1.55
SEC39	YLR440C	TSR1	Q07381	788 aa	Known RBP	5.36	□□□□□ -1.55
SEC39	YLR440C	ADY3	Q07732	790 aa		5.36	□□□□□ -1.55
SEC39	YLR440C	YOL087C	Q99247	1116 aa		5.36	□□□□□ -1.55
SEC39	YLR440C	HOM2	P13663	365 aa	Known RBP	5.36	□□□□□ -1.55
SEC39	YLR440C	VMA2	P16140	517 aa	Known RBP	5.36	□□□□□ -1.55
SEC39	YLR440C	RPC31	P17890	251 aa		5.36	□□□□□ -1.55
SEC39	YLR440C	AFR1	P33304	620 aa		5.36	□□□□□ -1.55
SEC39	YLR440C	TCD1	P38756	429 aa		5.36	□□□□□ -1.55
SEC39	YLR440C	HUL4	P40985	892 aa		5.36	□□□□□ -1.55
SEC39	YLR440C	MMM1	P41800	426 aa		5.36	□□□□□ -1.55
SEC39	YLR440C	SAP4	P53036	818 aa		5.36	□□□□□ -1.55
SEC39	YLR440C	FOX2	Q02207	900 aa	Known RBP	5.36	□□□□□ -1.55
SEC39	YLR440C	FDC1	Q03034	503 aa		5.36	□□□□□ -1.55
SEC39	YLR440C	NSE5	Q03718	556 aa		5.36	□□□□□ -1.55
SEC39	YLR440C	UBX2	Q04228	584 aa		5.36	□□□□□ -1.55
SEC39	YLR440C	OSH2	Q12451	1283 aa		5.36	□□□□□ -1.55
SEC39	YLR440C	EDE1	P34216	1381 aa		5.36	□□□□□ -1.55
SEC39	YLR440C	ROM2	P51862	1356 aa	Known RBP	5.36	□□□□□ -1.55
SEC39	YLR440C	RSF2	P46974	1380 aa		5.35	□□□□□ -1.55
SEC39	YLR440C	TRP2	P00899	507 aa	Known RBP	5.35	□□□□□ -1.55
SEC39	YLR440C	TRX1	P22217	103 aa	Known RBP	5.35	□□□□□ -1.55
SEC39	YLR440C	VAN1	P23642	535 aa		5.35	□□□□□ -1.55
SEC39	YLR440C	BMH1	P29311	267 aa	Known RBP	5.35	□□□□□ -1.55
SEC39	YLR440C	HIR1	P32479	840 aa		5.35	□□□□□ -1.55
SEC39	YLR440C	MOT2	P34909	587 aa	Known RBP	5.35	□□□□□ -1.55
SEC39	YLR440C	YKT6	P36015	200 aa	Known RBP	5.35	□□□□□ -1.55
SEC39	YLR440C	YKL023W	P36103	277 aa	Known RBP	5.35	□□□□□ -1.55
SEC39	YLR440C	BAP2	P38084	609 aa		5.35	□□□□□ -1.55
SEC39	YLR440C	NPR2	P39923	615 aa		5.35	□□□□□ -1.55
SEC39	YLR440C	SEC28	P40509	296 aa	Known RBP	5.35	□□□□□ -1.55
SEC39	YLR440C	SNZ3	P43545	298 aa		5.35	□□□□□ -1.55
SEC39	YLR440C	TEA1	P47988	759 aa		5.35	□□□□□ -1.55
SEC39	YLR440C	LSB1	P53281	241 aa		5.35	□□□□□ -1.55
SEC39	YLR440C	SNZ2	P53824	298 aa		5.35	□□□□□ -1.55
SEC39	YLR440C	BUL2	Q03758	920 aa	Known RBP	5.35	□□□□□ -1.55
SEC39	YLR440C	MLH2	Q07980	695 aa		5.35	□□□□□ -1.55
SEC39	YLR440C	NEW1	Q08972	1196 aa	Known RBP	5.35	□□□□□ -1.55
SEC39	YLR440C	YOR131C	Q12486	218 aa		5.35	□□□□□ -1.55
SEC39	YLR440C	ADF1	Q2V2Q1	113 aa		5.35	□□□□□ -1.55
SEC39	YLR440C	CDC10	P25342	322 aa	Known RBP	5.35	□□□□□ -1.55
SEC39	YLR440C	SLX5	P32828	619 aa	Known RBP	5.35	□□□□□ -1.55
SEC39	YLR440C	PET112	P33893	541 aa		5.35	□□□□□ -1.55
SEC39	YLR440C	PTH2	P34222	208 aa		5.35	□□□□□ -1.55
SEC39	YLR440C	UGA2	P38067	497 aa		5.35	□□□□□ -1.55
SEC39	YLR440C	MSR1	P38714	643 aa		5.35	□□□□□ -1.55
SEC39	YLR440C	ATG3	P40344	310 aa		5.35	□□□□□ -1.55
SEC39	YLR440C	ALA1	P40825	983 aa	Known RBP	5.35	□□□□□ -1.55
SEC39	YLR440C	ZIM17	P42844	174 aa		5.35	□□□□□ -1.55
SEC39	YLR440C	ATH1	P48016	1211 aa		5.35	□□□□□ -1.55
SEC39	YLR440C	LYS4	P49367	693 aa	Predicted RBP	5.35	□□□□□ -1.55
SEC39	YLR440C	STE20	Q03497	939 aa	Known RBP	5.35	□□□□□ -1.55
SEC39	YLR440C	ARP9	Q05123	467 aa		5.35	□□□□□ -1.55
SEC39	YLR440C	CDC53	Q12018	815 aa	Known RBP	5.35	□□□□□ -1.55
SEC39	YLR440C	SLM3	Q12093	417 aa		5.35	□□□□□ -1.55
SEC39	YLR440C	MPD2	Q99316	277 aa		5.35	□□□□□ -1.55
SEC39	YLR440C	SPE2	P21182	396 aa		5.34	□□□□□ -1.55
SEC39	YLR440C	CSE1	P33307	960 aa		5.34	□□□□□ -1.55
SEC39	YLR440C	PSY2	P40164	858 aa		5.34	□□□□□ -1.55
SEC39	YLR440C	INA22	P40576	216 aa		5.34	□□□□□ -1.55
SEC39	YLR440C	ROK1	P45818	564 aa	Predicted RBP	5.34	□□□□□ -1.55
SEC39	YLR440C	APS3	P47064	194 aa		5.34	□□□□□ -1.55
SEC39	YLR440C	BNA1	P47096	177 aa		5.34	□□□□□ -1.55
SEC39	YLR440C	ENT3	P47160	408 aa		5.34	□□□□□ -1.55
SEC39	YLR440C	UBP15	P50101	1230 aa		5.34	□□□□□ -1.55

Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms