RNA–Protein interactions for RNA: YLL028W

TPO1, Transcript of Polyamine transporter of the major facilitator superfamily, yeastyeast

Gene TPO1, Length 1,761 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TPO1YLL028W LAS1P36146 502 aaPredicted RBP8.21□□□□□ -1.1
TPO1YLL028W NUP82P40368 713 aa8.21□□□□□ -1.1
TPO1YLL028W FUS2Q05670 677 aa8.21□□□□□ -1.1
TPO1YLL028W YPR078CQ06813 372 aa8.21□□□□□ -1.1
TPO1YLL028W SUP45P12385 437 aaKnown RBP8.2□□□□□ -1.1
TPO1YLL028W SRO9P25567 434 aaKnown RBP8.2□□□□□ -1.1
TPO1YLL028W YKL222CP35995 705 aa8.2□□□□□ -1.1
TPO1YLL028W ISW1P38144 1129 aa8.2□□□□□ -1.1
TPO1YLL028W KEL1P38853 1164 aaKnown RBP8.2□□□□□ -1.1
TPO1YLL028W VHR2P40041 505 aa8.2□□□□□ -1.1
TPO1YLL028W FMS1P50264 508 aa8.2□□□□□ -1.1
TPO1YLL028W ARK1P53974 638 aa8.2□□□□□ -1.1
TPO1YLL028W WHI4Q07655 649 aaKnown RBP8.2□□□□□ -1.1
TPO1YLL028W YPL225WQ08971 146 aaKnown RBP8.2□□□□□ -1.1
TPO1YLL028W RUD3Q12234 484 aaKnown RBP8.2□□□□□ -1.1
TPO1YLL028W CDC8P00572 216 aa8.2□□□□□ -1.1
TPO1YLL028W PYC1P11154 1178 aaKnown RBP8.2□□□□□ -1.1
TPO1YLL028W GAP1P19145 602 aaPredicted RBP8.2□□□□□ -1.1
TPO1YLL028W DEF1P35732 738 aaKnown RBP8.2□□□□□ -1.1
TPO1YLL028W UBP11P36026 717 aa8.2□□□□□ -1.1
TPO1YLL028W TDA3P38758 523 aa8.2□□□□□ -1.1
TPO1YLL028W TOF1P53840 1238 aa8.2□□□□□ -1.1
TPO1YLL028W ARP6Q12509 438 aa8.2□□□□□ -1.1
TPO1YLL028W PMA1P05030 918 aaKnown RBP8.19□□□□□ -1.1
TPO1YLL028W PRP9P19736 530 aaKnown RBP8.19□□□□□ -1.1
TPO1YLL028W KTR2P33550 425 aa8.19□□□□□ -1.1
TPO1YLL028W MAD1P40957 749 aa8.19□□□□□ -1.1
TPO1YLL028W VPS4P52917 437 aa8.19□□□□□ -1.1
TPO1YLL028W KAP114P53067 1004 aa8.19□□□□□ -1.1
TPO1YLL028W YGL039WP53183 348 aaKnown RBP8.19□□□□□ -1.1
TPO1YLL028W UBP3Q01477 912 aaKnown RBP RIP-Chip data8.19□□□□□ -1.1not detected
TPO1YLL028W ECI1Q05871 280 aa8.19□□□□□ -1.1
TPO1YLL028W YPL277CQ08989 487 aa8.19□□□□□ -1.1
TPO1YLL028W ESS1P22696 170 aa8.18□□□□□ -1.1
TPO1YLL028W CDC11P32458 415 aa8.18□□□□□ -1.1
TPO1YLL028W NFU1P32860 256 aa8.18□□□□□ -1.1
TPO1YLL028W TIF4631P39935 952 aaKnown RBP8.18□□□□□ -1.1
TPO1YLL028W LCB2P40970 561 aa8.18□□□□□ -1.1
TPO1YLL028W ATG36P46983 293 aa8.18□□□□□ -1.1
TPO1YLL028W LSB1P53281 241 aa8.18□□□□□ -1.1
TPO1YLL028W STE23Q06010 1027 aa8.18□□□□□ -1.1
TPO1YLL028W UGA4P32837 571 aa8.17□□□□□ -1.1
TPO1YLL028W BCH2P36122 765 aa8.17□□□□□ -1.1
TPO1YLL028W OYE2Q03558 400 aaKnown RBP8.17□□□□□ -1.1
TPO1YLL028W YLR297WQ05899 129 aa8.17□□□□□ -1.1
TPO1YLL028W MED1Q12321 566 aa8.17□□□□□ -1.1
TPO1YLL028W ERC1P38767 581 aa8.17□□□□□ -1.1
TPO1YLL028W PES4P39684 611 aa8.17□□□□□ -1.1
TPO1YLL028W GTT3P39996 337 aa8.17□□□□□ -1.1
TPO1YLL028W NMD5P46970 1048 aa8.17□□□□□ -1.1
TPO1YLL028W BRO1P48582 844 aa8.17□□□□□ -1.1
TPO1YLL028W RIM8P53179 542 aa8.17□□□□□ -1.1
TPO1YLL028W CSR1Q06705 408 aaKnown RBP8.17□□□□□ -1.1
TPO1YLL028W PRP22P24384 1145 aaKnown RBP8.16□□□□□ -1.1
TPO1YLL028W SEC8P32855 1065 aa8.16□□□□□ -1.1
TPO1YLL028W SWE1P32944 819 aa8.16□□□□□ -1.1
TPO1YLL028W YKL050CP35736 922 aa8.16□□□□□ -1.1
TPO1YLL028W RCK2P38623 610 aa8.16□□□□□ -1.1
TPO1YLL028W GPD2P41911 440 aaKnown RBP8.16□□□□□ -1.1
TPO1YLL028W YGR021WP53212 290 aa8.16□□□□□ -1.1
TPO1YLL028W YLR326WQ06170 240 aaKnown RBP8.16□□□□□ -1.1
TPO1YLL028W NCR1Q12200 1170 aa8.16□□□□□ -1.1
TPO1YLL028W SPT2P06843 333 aaPredicted RBP8.15□□□□□ -1.1
TPO1YLL028W PWP2P25635 923 aaKnown RBP8.15□□□□□ -1.1
TPO1YLL028W TRZ1P36159 838 aaPredicted RBP8.15□□□□□ -1.1
TPO1YLL028W CCT2P39076 527 aaKnown RBP8.15□□□□□ -1.1
TPO1YLL028W SDS3P40505 327 aa8.15□□□□□ -1.1
TPO1YLL028W YMR1P47147 688 aaKnown RBP RIP-Chip data8.15□□□□□ -1.1not detected
TPO1YLL028W TRM44Q02648 567 aaKnown RBP8.15□□□□□ -1.1
TPO1YLL028W TMA64Q04600 565 aaKnown RBP8.15□□□□□ -1.1
TPO1YLL028W PNP1Q05788 311 aa8.15□□□□□ -1.1
TPO1YLL028W SPO21Q12411 609 aa8.15□□□□□ -1.1
TPO1YLL028W CLN3P13365 580 aa8.15□□□□□ -1.11
TPO1YLL028W PRE10P21242 288 aaKnown RBP RIP-Chip data8.15□□□□□ -1.11not detected
TPO1YLL028W MRF1P30775 413 aaPredicted RBP8.15□□□□□ -1.11
TPO1YLL028W GPI10P30777 616 aa8.15□□□□□ -1.11
TPO1YLL028W SPP381P38282 291 aaPredicted RBP8.15□□□□□ -1.11
TPO1YLL028W SEN54Q02825 467 aaPredicted RBP8.15□□□□□ -1.11
TPO1YLL028W USA1Q03714 838 aa8.15□□□□□ -1.11
TPO1YLL028W GIR2Q03768 265 aaPredicted RBP8.15□□□□□ -1.11
TPO1YLL028W APL5Q08951 932 aaKnown RBP8.15□□□□□ -1.11
TPO1YLL028W ZRT2Q12436 422 aa8.15□□□□□ -1.11
TPO1YLL028W CTT1P06115 562 aa8.14□□□□□ -1.11
TPO1YLL028W SRD1P09007 221 aa8.14□□□□□ -1.11
TPO1YLL028W VPS35P34110 944 aa8.14□□□□□ -1.11
TPO1YLL028W KAP123P40069 1113 aaKnown RBP8.14□□□□□ -1.11
TPO1YLL028W LCP5P40079 357 aaPredicted RBP8.14□□□□□ -1.11
TPO1YLL028W DSN1P40568 576 aa8.14□□□□□ -1.11
TPO1YLL028W RPC17P47076 161 aa8.14□□□□□ -1.11
TPO1YLL028W ALD6P54115 500 aaKnown RBP8.14□□□□□ -1.11
TPO1YLL028W SEC5P89102 971 aa8.14□□□□□ -1.11
TPO1YLL028W TDA9Q04545 1251 aa8.14□□□□□ -1.11
TPO1YLL028W YDR338CQ05497 695 aa8.14□□□□□ -1.11
TPO1YLL028W SLX4Q12098 748 aa8.14□□□□□ -1.11
TPO1YLL028W SEC20P28791 383 aa8.13□□□□□ -1.11
TPO1YLL028W GCD6P32501 712 aaKnown RBP8.13□□□□□ -1.11
TPO1YLL028W PHO88P38264 188 aaPredicted RBP8.13□□□□□ -1.11
TPO1YLL028W EXO5P38289 585 aa8.13□□□□□ -1.11
TPO1YLL028W TRS85P46944 698 aa8.13□□□□□ -1.11
TPO1YLL028W YML082WQ04533 649 aaKnown RBP8.13□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms