RNA–Protein interactions for RNA: YKR043C

SHB17, Transcript of Sedoheptulose bisphosphatase involved in riboneogenesis, yeast

Gene SHB17, Length 816 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHB17	YKR043C	KEX1	P09620	729 aa		11.29	□□□□□ -0.6
SHB17	YKR043C	SWI6	P09959	803 aa		11.29	□□□□□ -0.6
SHB17	YKR043C	WHI2	P12611	486 aa		11.29	□□□□□ -0.6
SHB17	YKR043C	RPC53	P25441	422 aa		11.29	□□□□□ -0.6
SHB17	YKR043C	TMT1	P32643	299 aa		11.29	□□□□□ -0.6
SHB17	YKR043C	CCT5	P40413	562 aa	Known RBP	11.29	□□□□□ -0.6
SHB17	YKR043C	YGR035C	P53222	116 aa		11.29	□□□□□ -0.6
SHB17	YKR043C	TPO2	P53283	614 aa		11.29	□□□□□ -0.6
SHB17	YKR043C	TOF1	P53840	1238 aa		11.29	□□□□□ -0.6
SHB17	YKR043C	YSC83	P32792	385 aa		11.28	□□□□□ -0.6
SHB17	YKR043C	CIR1	P42940	261 aa		11.28	□□□□□ -0.6
SHB17	YKR043C	YPT11	P48559	417 aa		11.28	□□□□□ -0.6
SHB17	YKR043C	YNL146W	P53906	100 aa		11.28	□□□□□ -0.6
SHB17	YKR043C	CUR1	Q06469	252 aa		11.28	□□□□□ -0.6
SHB17	YKR043C	RPL22A	P05749	121 aa	Known RBP	11.27	□□□□□ -0.61
SHB17	YKR043C	DPH2	P32461	534 aa		11.27	□□□□□ -0.61
SHB17	YKR043C	YKT6	P36015	200 aa	Known RBP	11.27	□□□□□ -0.61
SHB17	YKR043C	JHD1	P40034	492 aa		11.27	□□□□□ -0.61
SHB17	YKR043C	DJP1	P40564	432 aa		11.27	□□□□□ -0.61
SHB17	YKR043C	SPO74	P45819	413 aa		11.27	□□□□□ -0.61
SHB17	YKR043C	TAM41	P53230	385 aa		11.27	□□□□□ -0.61
SHB17	YKR043C	YVH1	Q02256	364 aa	Known RBP	11.27	□□□□□ -0.61
SHB17	YKR043C	PCK1	P10963	549 aa		11.26	□□□□□ -0.61
SHB17	YKR043C	ADE2	P21264	571 aa	Known RBP	11.26	□□□□□ -0.61
SHB17	YKR043C	YER130C	P39959	443 aa		11.26	□□□□□ -0.61
SHB17	YKR043C	RSC8	P43609	557 aa	Known RBP	11.26	□□□□□ -0.61
SHB17	YKR043C	GCV2	P49095	1034 aa		11.26	□□□□□ -0.61
SHB17	YKR043C	MNP1	P53163	194 aa	Predicted RBP	11.26	□□□□□ -0.61
SHB17	YKR043C	HAP5	Q02516	242 aa		11.26	□□□□□ -0.61
SHB17	YKR043C	YPL277C	Q08989	487 aa		11.26	□□□□□ -0.61
SHB17	YKR043C	APC11	Q12157	165 aa		11.26	□□□□□ -0.61
SHB17	YKR043C	OSW2	Q12202	724 aa		11.26	□□□□□ -0.61
SHB17	YKR043C	NAM7	P30771	971 aa	Known RBP	11.25	□□□□□ -0.61
SHB17	YKR043C	VPS35	P34110	944 aa		11.25	□□□□□ -0.61
SHB17	YKR043C	MNN4	P36044	1178 aa		11.25	□□□□□ -0.61
SHB17	YKR043C	UBP13	P38187	747 aa		11.25	□□□□□ -0.61
SHB17	YKR043C	YFL034W	P43564	1073 aa		11.25	□□□□□ -0.61
SHB17	YKR043C	CUL3	P53202	744 aa		11.25	□□□□□ -0.61
SHB17	YKR043C	UBR2	Q07963	1872 aa		11.24	□□□□□ -0.61
SHB17	YKR043C	GPA1	P08539	472 aa		11.24	□□□□□ -0.61
SHB17	YKR043C	SAC6	P32599	642 aa	Known RBP	11.24	□□□□□ -0.61
SHB17	YKR043C	YEL1	P34225	687 aa		11.24	□□□□□ -0.61
SHB17	YKR043C	HUL4	P40985	892 aa		11.24	□□□□□ -0.61
SHB17	YKR043C	NBP1	P52919	319 aa	Predicted RBP	11.24	□□□□□ -0.61
SHB17	YKR043C	ENV11	P53246	860 aa		11.24	□□□□□ -0.61
SHB17	YKR043C	YDR090C	Q03193	310 aa		11.24	□□□□□ -0.61
SHB17	YKR043C	DOT1	Q04089	582 aa	Known RBP	11.24	□□□□□ -0.61
SHB17	YKR043C	VMS1	Q04311	632 aa	Known RBP	11.24	□□□□□ -0.61
SHB17	YKR043C	MAG2	Q06436	670 aa	Known RBP	11.24	□□□□□ -0.61
SHB17	YKR043C	PCD1	Q12524	340 aa		11.24	□□□□□ -0.61
SHB17	YKR043C	AIM44	Q99299	758 aa		11.24	□□□□□ -0.61
SHB17	YKR043C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	11.23	□□□□□ -0.61	RIP-Chip
SHB17	YKR043C	BUD2	P33314	1104 aa		11.23	□□□□□ -0.61
SHB17	YKR043C	VID24	P38263	362 aa		11.23	□□□□□ -0.61
SHB17	YKR043C	UBX7	P38349	436 aa		11.23	□□□□□ -0.61
SHB17	YKR043C	YAP1801	P38856	637 aa		11.23	□□□□□ -0.61
SHB17	YKR043C	BIM1	P40013	344 aa		11.23	□□□□□ -0.61
SHB17	YKR043C	YNL134C	P53912	376 aa	Known RBP	11.23	□□□□□ -0.61
SHB17	YKR043C	VTC3	Q02725	835 aa		11.23	□□□□□ -0.61
SHB17	YKR043C	SKY1	Q03656	742 aa		11.23	□□□□□ -0.61
SHB17	YKR043C	ECM7	Q06200	448 aa		11.23	□□□□□ -0.61
SHB17	YKR043C	TLG2	Q08144	397 aa		11.23	□□□□□ -0.61
SHB17	YKR043C	TCO89	Q08921	799 aa		11.23	□□□□□ -0.61
SHB17	YKR043C	PHO8	P11491	566 aa		11.22	□□□□□ -0.61
SHB17	YKR043C	GLN3	P18494	730 aa		11.22	□□□□□ -0.61
SHB17	YKR043C	DAL7	P21826	554 aa		11.22	□□□□□ -0.61
SHB17	YKR043C	SNF7	P39929	240 aa	Known RBP	11.22	□□□□□ -0.61
SHB17	YKR043C	YPL216W	Q08964	1102 aa		11.22	□□□□□ -0.61
SHB17	YKR043C	COX4	P04037	155 aa		11.21	□□□□□ -0.61
SHB17	YKR043C	ADE4	P04046	510 aa	Known RBP	11.21	□□□□□ -0.61
SHB17	YKR043C	TIF1	P10081	395 aa	Known RBP	11.21	□□□□□ -0.61
SHB17	YKR043C	YKR023W	P36119	530 aa	Known RBP	11.21	□□□□□ -0.61
SHB17	YKR043C	SLX1	P38324	304 aa		11.21	□□□□□ -0.61
SHB17	YKR043C	YHL026C	P38740	315 aa		11.21	□□□□□ -0.61
SHB17	YKR043C	LAM5	P43560	674 aa		11.21	□□□□□ -0.61
SHB17	YKR043C	MCM6	P53091	1017 aa	Known RBP	11.21	□□□□□ -0.61
SHB17	YKR043C	TRS130	Q03660	1102 aa		11.21	□□□□□ -0.61
SHB17	YKR043C	ETT1	Q08421	412 aa	Known RBP	11.21	□□□□□ -0.61
SHB17	YKR043C	CDC53	Q12018	815 aa	Known RBP	11.21	□□□□□ -0.61
SHB17	YKR043C	ZPS1	Q12512	249 aa		11.21	□□□□□ -0.61
SHB17	YKR043C	TRK2	P28584	889 aa		11.2	□□□□□ -0.62
SHB17	YKR043C	IME2	P32581	645 aa		11.2	□□□□□ -0.62
SHB17	YKR043C	SKG6	P32900	734 aa	Predicted RBP	11.2	□□□□□ -0.62
SHB17	YKR043C	MRX3	P38172	270 aa		11.2	□□□□□ -0.62
SHB17	YKR043C	RVS167	P39743	482 aa	Known RBP	11.2	□□□□□ -0.62
SHB17	YKR043C	OPT1	P40897	799 aa		11.2	□□□□□ -0.62
SHB17	YKR043C	ORC5	P50874	479 aa		11.2	□□□□□ -0.62
SHB17	YKR043C	TRS33	Q99394	268 aa		11.2	□□□□□ -0.62
SHB17	YKR043C	TOM70	P07213	617 aa	Known RBP	11.19	□□□□□ -0.62
SHB17	YKR043C	MSD1	P15179	658 aa	Known RBP	11.19	□□□□□ -0.62
SHB17	YKR043C	MSP1	P28737	362 aa		11.19	□□□□□ -0.62
SHB17	YKR043C	MRF1	P30775	413 aa	Predicted RBP	11.19	□□□□□ -0.62
SHB17	YKR043C	RPT1	P33299	467 aa	Known RBP	11.19	□□□□□ -0.62
SHB17	YKR043C	YKL091C	P33324	310 aa	Known RBP	11.19	□□□□□ -0.62
SHB17	YKR043C	RSM25	P40496	264 aa		11.19	□□□□□ -0.62
SHB17	YKR043C	CCM1	P48237	864 aa	Predicted RBP	11.19	□□□□□ -0.62
SHB17	YKR043C	SHE10	P53075	577 aa		11.19	□□□□□ -0.62
SHB17	YKR043C	VID30	P53076	958 aa		11.19	□□□□□ -0.62
SHB17	YKR043C	LSC2	P53312	427 aa		11.19	□□□□□ -0.62
SHB17	YKR043C	EMI2	Q04409	500 aa	Known RBP	11.19	□□□□□ -0.62

Retrieved 100 of 5,963 RNA–protein pairs in 67.9 ms